Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00264 ATGGATGATAATGGAGTAGGAGGCGGGAGTGAATCTTCTTACAGTAAAGAACATCAAAGCGAGGGAGCAATGGGCATCAGGAAAGGTCCATGGACTGTGGAAGAGGACACCGAACTCGCCAATTACATCCACGCCCATGGAGAAGGACGATGGAATTCCGTCGCGCGTTGTGCAGGTCTAAAGAGATCCGGGAAAAGTTGCAGACTGAGATGGCTAAACTACTTACGTCCCGATGTTCGACGTGGAAATATCACTCTCCAAGAGCAACTATTGATTCTTGACCTTCATTCTCGCTGGGGCAATAGGTGGTCAAAAATAGCGCAGCAATTGCCTGGAAGAACAGACAACGAGATCAAGAATTATTGGAGGACCCGAGTCATAAAGCAAGCGAAACACCTCAGATGTGACGTCAACAGTAAGCAGTTTAGAGACGCCATGCGTTACGTCTGGATGCCCCGCTTGCTTGAACGGATACAGGCATCATCCGAATACTGCGCCCAGCCCACGAGCTCATCAGTATCCCAAATCCACAATGACACTTCAGGAGTCCCGAACTCACGCGTATCTGGATCTCAAGGGGTCAGCTCGAGCGACATATCGGGTCCATCCATGGACTTGGAGGCGATCCAACTTCATTCGAATTCGGATCATACTGGGTGCTCAGAAAGTCAAGCTCCACAATGGATGACATGGGATGGTTTGGTAAATGGGTCGGTTATGTATCCATCTATGGGGGTGGATTTCCAATCTTCTCAAGAAGACGACCTTTTTGGATGTGGGGACTGGCAGAACATTGGGTGGAATGAAGACAATCTATTGTTTCTGACGGAACACCAGCTTGGAGGAGACTGGAGAGGATAG 861 0.4913 MDDNGVGGGSESSYSKEHQSEGAMGIRKGPWTVEEDTELANYIHAHGEGRWNSVARCAGLKRSGKSCRLRWLNYLRPDVRRGNITLQEQLLILDLHSRWGNRWSKIAQQLPGRTDNEIKNYWRTRVIKQAKHLRCDVNSKQFRDAMRYVWMPRLLERIQASSEYCAQPTSSSVSQIHNDTSGVPNSRVSGSQGVSSSDISGPSMDLEAIQLHSNSDHTGCSESQAPQWMTWDGLVNGSVMYPSMGVDFQSSQEDDLFGCGDWQNIGWNEDNLLFLTEHQLGGDWRG* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00264 286 ProSiteProfiles Myb-like domain profile. 76 126 IPR001005 -
Pte13g00264 286 SUPERFAMILY Homeodomain-like 24 122 IPR009057 -
Pte13g00264 286 MobiDBLite consensus disorder prediction 1 29 - -
Pte13g00264 286 FunFam Myb transcription factor 28 80 - -
Pte13g00264 286 Gene3D - 85 126 - -
Pte13g00264 286 Gene3D - 29 80 - -
Pte13g00264 286 SMART sant 27 77 IPR001005 -
Pte13g00264 286 SMART sant 80 128 IPR001005 -
Pte13g00264 286 Pfam Myb-like DNA-binding domain 28 75 IPR001005 -
Pte13g00264 286 Pfam Myb-like DNA-binding domain 81 124 IPR001005 -
Pte13g00264 286 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 76 130 IPR017930 -
Pte13g00264 286 ProSiteProfiles Myb-like domain profile. 23 75 IPR001005 -
Pte13g00264 286 FunFam MYB transcription factor 85 148 - -
Pte13g00264 286 CDD SANT 85 124 IPR001005 -
Pte13g00264 286 MobiDBLite consensus disorder prediction 170 200 - -
Pte13g00264 286 CDD SANT 30 75 IPR001005 -
Pte13g00264 286 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 23 75 IPR017930 -
Pte13g00264 286 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 25 203 IPR044676 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00264 Pte-Chr13 1878277 1881588 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00264 26 275 MYB Transcription Factor Family AT2G47190 54.331 1.09e-79 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte13g00264 Myb_DNA-binding 1.5e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00264 K09422 - tcc:18613752 291.582