Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01023 ATGGCCGGCGATGATCTCATCCTTGTCCAAAAGATACCAACTGGGGCTGAAAAGGAGCCGGTATTCTTGCATGGTGACTTGGAAATGCGCATTATTGAAGCTAAGTATCTTCCAAATATGGATTTAGCTTCAGAAAACATGAGAAAGTTGTTTACAATGTGTGGCAGTTGCCATACTCCCGTCTGCAAAGGATCTAAGACGCTCTCGGGAAGAAGTAAGAGTAATACAAGTGACCCTTATGTTTCTGTTTGCATAGGAGGGGCTACCATAGCTCAAACTAGAGTCATACCTGATTGTGAGAATCCCTTGTGGGATGAGTACTTTTGTGTTCCTGTTGCTCACCCCATTCACAAGTTAGAGTTTCTTGTGAAAGACGATGATGTGCTTGGGGCAGACCTAATTGGAATAGTGGAGATACCAGTTGAGAAAATTTTGCCAGGAGACATCATAAATGATTGGTTCAAAATTCTCAGCTTGTCGAAGCAATCTTCCAAGTTTCAACCTGAATTGCACGTTTCAATTCATTTCAAGCCAGTAATAAACAACCCCCTGTACGGTACAGGTATCCGTGCTGCAACCCATTATATCGGGGTTCCTAATACATATTTTCCTCTAAGAAAAGGAGGGAGTGTGACGCTTTATCAAGACGCTCATGTGCCTAATGGTATGTTACCTGAAATTCAACTGGATGATGGGAAAGTTTTCCAGCATGGTAAATGTTGGGAGGAGATGTGCCATGCCATTTTGGGAGCAAGAAGTCTGGTTTATGTCATTGGCTGGTCTGTTTTCCACCCTGTCAAGCTTGTGAGGGAGCCAACAAAACCATTGCCTTCTGGAGGAGAGCTTTCACTTGGAGAACTATTGAAATACAAGTCACAAGAAGGGGTCCGTGTCGTTTTGCTGATTTGGGATGACAAGACTTCACATGATAAGTTTCTCTTGAAAACGAATGGAGTCATGAATACTCATGATGAAGAAACCAAAAAATTTTTTAAACGCTCCAGCGTGCACTGTGTCCTTTCTCCTCGTTATGCAAGCAATAAACTCAGTATTTTCAAGCAACAGGTTGTGGGAACCCTTTTTACTCATCATCAAAAGTGTGTCCTGGTTGATACTTTAGGCGCAGAAAATAAACGAAAAATCACGGCTTTTATGGGTGGCTTGGACTTGTGTGACGGTAGATATGACACTCCCGAGCATCGGCTTTTCGGTGATATGGACACTGTCTTCAGAGATGATTTTCATAATCCCACTTTTCCTTCCAATAGCAGCCCCCCTAGACAACCATGGCATGACTTGCACTGCAAAATTGAAGGTCCAGCTGCCTACGATATTTTAACAAATTTTGAACAAAGATGGAGGAAAGCCAGAAAATGGCGTGAATTCAAGCTGAAGAAAGTCACAAACTGGCATGATGATCCGTTGTTAAAGCTGGAACGTATCTCATGGATAATTTATCCATCTGCTACAGACAGAGACAAATGCACACGTGTGGTTCAAGAAGATGATCCAGAGAACTGGAATGTGCAGGTGTTCCGGTCAATAGATTCAGGATCTGTGAAAGGATTTCCTAAAGATTTTGAAGAAGCGAAAGCACAGAATCTTCATTGTGGCAAAAACTTGAAAGTGGACAAAAGCATCCATACTGCTTATGTGCATGCCATAAGAACAGCGCAGCACTTTATATATATAGAGAATCAATATTTTCTTGGATCTTCGTATCATTGGCCATCATACAAAAGTGCAGGTGCAGACAACTTGGTTCCAATGGAGTTGGCTTTAAAGATTGCCAGCAAGATATATGCAAATGAACGCTTTTCTGCGTATATAGTCATACCAATGTGGCCAGAGGGAGTGCCAACCAGTGCTCCCGTGCAGGAAATCTTATACTGGCAGGGACAGACGATGGCTATGATGTACAAAATTGTAGCAGATGCCCTCCAACAATCGGGCCTTTCAGATGCATATCACCCACAAGATTATTTGAATTTTTACTGCCTTGGCAAGCGCGAAATTTCATCTGGAGTAGGACACAGATTCAATGAGTCTTCTGAGAACCCGGTACAGAAGTTTCGACGTTTCATGATTTACGTACATGCCAAAGGAATGGTTGTGGATGACGAATATGTGATGGTGGGATCTGCCAACATTAACCAGAGATCCTTGGACGGTTCAAGAGACACAGAAATTGCAATGGGAGCTTACCAACCTAAATATACATGGGGAAGAAAGAACGCACACCCTCATGGCCAGGTGTATGGATACAGGATGTCACTGTGGACAGAACACCTAGGTGGAGTCCGTGATTATTTTAAAGAGCCCCAGAGCCTTGAATGCGTGAGATGTGTCAACGACATTGCCCAGAATAATTGGGAAGCATATGTGTCTGATGAGGAAAAGCAGATGACTGGAACCTTATTACCATATCCAGTGCAAATAAGCAGTGATGGAAAAATCAATCCATTGCCAATGTTTGAGACATTCCCAGATGTTGGTGGCAAAATTCTTGGATCACCAACCTCTCTTCCCGATGCCCTAACCACATGA 2547 0.4291 MAGDDLILVQKIPTGAEKEPVFLHGDLEMRIIEAKYLPNMDLASENMRKLFTMCGSCHTPVCKGSKTLSGRSKSNTSDPYVSVCIGGATIAQTRVIPDCENPLWDEYFCVPVAHPIHKLEFLVKDDDVLGADLIGIVEIPVEKILPGDIINDWFKILSLSKQSSKFQPELHVSIHFKPVINNPLYGTGIRAATHYIGVPNTYFPLRKGGSVTLYQDAHVPNGMLPEIQLDDGKVFQHGKCWEEMCHAILGARSLVYVIGWSVFHPVKLVREPTKPLPSGGELSLGELLKYKSQEGVRVVLLIWDDKTSHDKFLLKTNGVMNTHDEETKKFFKRSSVHCVLSPRYASNKLSIFKQQVVGTLFTHHQKCVLVDTLGAENKRKITAFMGGLDLCDGRYDTPEHRLFGDMDTVFRDDFHNPTFPSNSSPPRQPWHDLHCKIEGPAAYDILTNFEQRWRKARKWREFKLKKVTNWHDDPLLKLERISWIIYPSATDRDKCTRVVQEDDPENWNVQVFRSIDSGSVKGFPKDFEEAKAQNLHCGKNLKVDKSIHTAYVHAIRTAQHFIYIENQYFLGSSYHWPSYKSAGADNLVPMELALKIASKIYANERFSAYIVIPMWPEGVPTSAPVQEILYWQGQTMAMMYKIVADALQQSGLSDAYHPQDYLNFYCLGKREISSGVGHRFNESSENPVQKFRRFMIYVHAKGMVVDDEYVMVGSANINQRSLDGSRDTEIAMGAYQPKYTWGRKNAHPHGQVYGYRMSLWTEHLGGVRDYFKEPQSLECVRCVNDIAQNNWEAYVSDEEKQMTGTLLPYPVQISSDGKINPLPMFETFPDVGGKILGSPTSLPDALTT* 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01023 848 Pfam Phospholipase D C terminal 769 838 IPR024632 -
Pte11g01023 848 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 694 721 IPR001736 GO:0003824
Pte11g01023 848 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 359 394 IPR001736 GO:0003824
Pte11g01023 848 Gene3D C2 domain 23 183 IPR035892 -
Pte11g01023 848 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 22 178 IPR035892 -
Pte11g01023 848 SUPERFAMILY Phospholipase D/nuclease 200 463 - -
Pte11g01023 848 Gene3D Endonuclease Chain A 232 477 - -
Pte11g01023 848 SUPERFAMILY Phospholipase D/nuclease 547 779 - -
Pte11g01023 848 CDD C2_plant_PLD 20 176 - -
Pte11g01023 848 SMART pld_4 694 721 IPR001736 GO:0003824
Pte11g01023 848 SMART pld_4 359 394 IPR001736 GO:0003824
Pte11g01023 848 Pfam PLD-like domain 686 730 IPR025202 -
Pte11g01023 848 PANTHER PHOSPHOLIPASE D 20 837 IPR015679 -
Pte11g01023 848 FunFam Phospholipase D delta 231 473 - -
Pte11g01023 848 PIRSF PLD_plant 14 848 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Pte11g01023 848 Pfam C2 domain 25 156 IPR000008 -
Pte11g01023 848 SMART C2_3c 26 153 IPR000008 -
Pte11g01023 848 Gene3D Endonuclease Chain A 512 740 - -
Pte11g01023 848 ProSiteProfiles C2 domain profile. 8 154 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01023 Pte-Chr11 25558454 25562577 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01023 21 849 Phospholipase D Gene Family (Wang group) AT2G42010 53.828 0.0 919
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01023 K01115 - qsa:O6P43_012204 1327