Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00069 ATGAGAAAACGTATCAATATGGAAAGTGATGCTGACTACAATTCCTTTGCCACATCCTCCTCCTCCTCCTCCTCCAATTCCACCACCACACCTTCAATCTTCACTGACACCAACACTTCAAGCACATCCTGCTCCTCAAATTCAGATTCATGCAGCAAAGAACACTCCAAAACCCCTCAAAATGACTCAACCTCATTGGAAAATGGAAAAGGCTCAAAGGGGTGCAAGAAGAGGCAGAGAGAAAATAAGAATGAGAATCACCCTACTTATAGGGGTGTAAGGATGAGGAATTGGGGAAAATGGGTGTCTGAAATCCGTGAGCCAAGGAAGAAGTCAAGAATATGGCTTGGAACATACCCTACAGCAGAAATGGCAGCTAGAGCACATGATGTGGCTGCCTTAGCCATCAAGGGCCATTCAGCATACCTAAATTTCCCTGAATTGGCTCAAGAATTTCCAAGGCCAGCTACCTCTTCACCTAAGGACATTCAAGCAGCAGCTGCAAAAGCAGCAAACACTTCCTTTGAGGTGGTTAAGCATTGCCAAAGTACTCAACAAGAAGCAGAACCAAGCCAAGCAGAACAAGCCTCATCTTCAACTCTCTCAATGGACAATACTCAAGAGTCTTCAAGTTCTCACTCTACCAATGATGATGACACTTTGTTTGACCTTCCAGATCTTTTCCCTGATGGACTTTGCTCCTATTCTTCTTCTTGGCATTTGTGTGCAGTTGATAGTGGGTTTAGGCTTGAGGAATCATTTTTTTGGGAGAATTATTAG 780 0.4385 MRKRINMESDADYNSFATSSSSSSSNSTTTPSIFTDTNTSSTSCSSNSDSCSKEHSKTPQNDSTSLENGKGSKGCKKRQRENKNENHPTYRGVRMRNWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHSAYLNFPELAQEFPRPATSSPKDIQAAAAKAANTSFEVVKHCQSTQQEAEPSQAEQASSSTLSMDNTQESSSSHSTNDDDTLFDLPDLFPDGLCSYSSSWHLCAVDSGFRLEESFFWENY 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00069 259 Gene3D AP2/ERF domain 89 147 IPR036955 GO:0003700|GO:0006355
Pste7g00069 259 SMART rav1_2 89 152 IPR001471 GO:0003700|GO:0006355
Pste7g00069 259 MobiDBLite consensus disorder prediction 1 91 - -
Pste7g00069 259 CDD AP2 90 148 IPR001471 GO:0003700|GO:0006355
Pste7g00069 259 ProSiteProfiles AP2/ERF domain profile. 89 146 IPR001471 GO:0003700|GO:0006355
Pste7g00069 259 Pfam AP2 domain 88 139 IPR001471 GO:0003700|GO:0006355
Pste7g00069 259 MobiDBLite consensus disorder prediction 183 218 - -
Pste7g00069 259 MobiDBLite consensus disorder prediction 11 70 - -
Pste7g00069 259 SUPERFAMILY DNA-binding domain 89 147 IPR016177 GO:0003677
Pste7g00069 259 MobiDBLite consensus disorder prediction 71 90 - -
Pste7g00069 259 PRINTS Ethylene responsive element binding protein signature 90 101 IPR001471 GO:0003700|GO:0006355
Pste7g00069 259 PRINTS Ethylene responsive element binding protein signature 112 128 IPR001471 GO:0003700|GO:0006355
Pste7g00069 259 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 55 228 - -
Pste7g00069 259 FunFam Ethylene-responsive transcription factor 2 89 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00069 Pste-Chr7 598150 598929 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00069 77 255 AP2-EREBP Transcription Factor Family AT2G44940 56.311 1.76e-70 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pste7g00069 AP2 3e-14 CL0081