Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0638 ATGGTGGATGGTGGTAGAACTAGAAGAAAGAGGAAGCAGTTAAGCAGAATCCATGCATTCTCCATTGGGAAAGCTTCATTCAAAGGTGAACATTCACTTATAGGAGGACCTGGTTTCTCAACAATAGTTTACTGCAATGAACCACAAAGTGGCAGTGACATTGTCAACTATGGTGACAATTATGTCAGAACTACTAAATATACAGCGTTCACTTTCATTCCCAAATCCTTATTTGAGCAATTTAGAAGAGTTGCCAATTTTTACTTCCTTGTTTGTGCAATCTTGTCTTTTTTTCCTGTCTCTCCTTACTCAGCTGTTAGCAATGTTGTTCCTCTTCTTGTTGTTGTTGCTGCTACAATTGGGAAAGAAGCTGTTGAGGATTGGAGAAGACTGAAGCAGGATATTGAAATGAATAACAGAAAGGTTAAAGTCCATAATGGAGAGGGTGTTTTCGACTATTCTAAATGGCGCGATTTGAAGGTTGGAGACATAGTGAAAGTAGAAAAAGATGAGTTTTTCCCCGCTGATCTCATCCTATTATCATCAAGCTATGAAGATGCTATTTGCTATGTTGAGACCATGAATCTTGATGGAGAAACAAATCTTAAACTCAAACAAGCACTGGAAGAAACTTCCAAGTTTCAAGAAGACTCTACATTCCGAAATTTCAAAGCTATTATCAAATGTGAGGATCCAAATGCATATCTTTACTCATTTATAGGCAATATAAAGCTTGAAGATCAACTATACCCGCTTGCGCCTCAGCAGTTACTGCTTAGGGACTCGAAGCTTAGGAACACGGATTTTATATACGGTGCGGTAATCTTTACCGGCCATGATACGAAGGTTATGCAGAACTCCATGGACCCTCCTTCGAAGAGAAGCAAAGTTGAGAAGCGAATGGATAAGATAATCTACTTTCTGTTCTTAGTTTTGTTTTTTATTTCTTTTATCGGTTCGATTTTCTTTGGCATTGCAACAAGTGAAGATCTTGAAAATGGAGTAATGAAGAGATGGTACTTACGACCGGATGATACTACAATCTACTACGATCCAAAGAAAGCGCCGGTTGCAGCAATGCTGCATTTCTTGACAGCACTAATGTTGTATAGTTACTTGATTCCAATTTCTTTGTATGTCTCCATTGAAATTGTGAAAGTACTTCAAAGCATGTTTGTCAACCACGATATACACATGTATTACGAGGAAACTAACCAGCCTGCACATGCTCGTACCTCGAATTTAAACGAGGAACTTGGCCAAGTTGATACTATTCTTTCGGATAAAACAGGAACTTTGACTTGCAATTCCATGGAATTTCTCAAGTGTTCGATTGCTGGGATTGCATATGGACAACGTATTACCGAAGTTGAGAGAGCTCTAGCAAGGAGAAAAGGATTACCATTAAGTCAAGAGTTGACAGAAGATGGAAATGTTGCTGAGATTTCTGAAGCAAAGCCATTCATTAAAGGTTTCAACTTCATGGATGAAAGGATTATGAATGGAAATTGGGTCGAGGAGCCTCACGCCAATGTAATCCAGAACTTCTTGCGGTTGTTGGCGGTATGCCATACTGCAATACCTGAAATTGATGAAGAAAATGGCAAAGTTTCATATGAAGCTGAGTCACCTGATGAGGCAGCTTTTGTAATTTCAGCTAAAGAACTTGGATTTGAGTTTTATGAAAGGACTCAAACAACTATTTTGCTGCGCGAATTCGATTCGATATCAGGCAGGATCATTAGAAGGTCCTACAGACTTTTAAATATATTAGAGTTTAGTAGTTCAAGAAAACGAATGTCAGTTATTGTAAGAGACGAGGAAGAGAAACTTCTACTTCTTAGCAAAGGCGCTGACAGTGTCATGTTTGAACGACTTGCGGAGAATGGAAGGGAGTTTGAGAAACAGACTAAGCAGCACATTAACGAATACGCAGATGCTGGTTTGAGGACCTTGATATTGGCCTATCGCGAACTTGATGAAGAAGAGTACATTATCTTTAATAAAGAATTGATGGAAGCCAAGAGCTTAGTAAGTGCAGATCGCGAGCAGATTGTGGAGGACGTATTAGAAAAGATTGAAAAGGATTTAATTCTTCTTGGTGCTACCGCAGTTGAAGACAAACTTCAAAACGGAGTTCCTGAATGTATTGACAAGCTAGCACAGGCAGGAATAAAGTTATGGGTTTTGACTGGTGATAAAATGGAGACAGCAATCAATGTCGGGTTTGCTTGTAGGTTACTTCGGCAAGGAATGAAGCAAATTATCATTAGTTCAGACACTCCAGAAACCAAATCACTTGAGAAAATGGAAAACAAGTCTGATGCTGATGTGGCAATTAAGAAAAGTGTTCTTTGTCAATTAATGGAAGGAAATGAATTACTTGGTGCATCCATTGAAAACACCGAGGCATTAGCTCTGATAATTGATGGGAAGTCTCTGACATATGCACTGGAAGATGATGTAAAGGACCTGTTTCTCGCACTTGCAGTTGGTTGCGCGTCGGTTATATGCTGTCGTTCATCTCCGAAGCAAAAAGCACTTGTCACTAGATTAGTAAAGAATAAAACAGGTTGTACTACTCTTGCAATTGGTGATGGTGCAAATGATGTTGGAATGCTCCAAGAAGCAGATATTGGAATCGGTATGAGTGGCGTTGAAGGAATGCAGGCAGTTATGTCTAGTGATATTGCAATTGCTCAATTCCGGTATCTAGAGCGTTTACTTCTCGTGCATGGACATTGGTGTTACAGAAGAATCTCATTAATGATCTGTTACTTCTTTTACAAGAATATTGCATTTGGCTTTACTCTATTCTTGTATGAGATCTACGCCTCATTCTCCGGGCAAGTTGCATACAATGATTGGTTTCTGTCACTATATAATGTATTCTTCACTTCCCTTCCTGTAATTGCCTTGGGAGTATTTGACCAAGATGTCTCTGCTAGATTATGCCTTAAGTTCCCATTATTATATCAAGAAGGTGTACAAAATGTCCTCTTTAGCTGGAAAAGGATTCTAGGATGGATATTGAATGGAGTAATGAGTGCAACCATAATATTTTTCTTCTGCATTAATGCAATGGAGAATCAAGCATTCCGAAAAGGAGGTGAAGTAGTTGGACTTGAAATTCTTGGTGCAACCATGTACACTTGTGTTGTTTGTGTGGTAAATTTTCAAATGGCATTATCCATAACTTACTTCACTTACATACAACATATATTCATTTGGGGTGGCATTCTTTTTTGGTATATTTTCCTTTTAACATATGGAACTATTAACCCCTCTTTATCAACCACTGCTTATAAAGTCCTAATTGAAGCTTGTGCACCTGCACCATCTTATTGGCTCATCACTCTCCTTGTTCTTGTTGCTTCACTACTTCCATATCTTGTATACGCCTCGATCCAAATGCGGTTCTTTCCTATGTTTCATCAAATGATAAAGTGGATGTGCAATGAAGGACATGCAACTGGTCCAGAATATGTTGATATTGTGCGACAGCGATCAATACGACATGCAACAGTCGGGCTAATGGCTCGTTTCAAAGCATCCAAGACTTCTCATGTATGA 3573 0.3896 MVDGGRTRRKRKQLSRIHAFSIGKASFKGEHSLIGGPGFSTIVYCNEPQSGSDIVNYGDNYVRTTKYTAFTFIPKSLFEQFRRVANFYFLVCAILSFFPVSPYSAVSNVVPLLVVVAATIGKEAVEDWRRLKQDIEMNNRKVKVHNGEGVFDYSKWRDLKVGDIVKVEKDEFFPADLILLSSSYEDAICYVETMNLDGETNLKLKQALEETSKFQEDSTFRNFKAIIKCEDPNAYLYSFIGNIKLEDQLYPLAPQQLLLRDSKLRNTDFIYGAVIFTGHDTKVMQNSMDPPSKRSKVEKRMDKIIYFLFLVLFFISFIGSIFFGIATSEDLENGVMKRWYLRPDDTTIYYDPKKAPVAAMLHFLTALMLYSYLIPISLYVSIEIVKVLQSMFVNHDIHMYYEETNQPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFLKCSIAGIAYGQRITEVERALARRKGLPLSQELTEDGNVAEISEAKPFIKGFNFMDERIMNGNWVEEPHANVIQNFLRLLAVCHTAIPEIDEENGKVSYEAESPDEAAFVISAKELGFEFYERTQTTILLREFDSISGRIIRRSYRLLNILEFSSSRKRMSVIVRDEEEKLLLLSKGADSVMFERLAENGREFEKQTKQHINEYADAGLRTLILAYRELDEEEYIIFNKELMEAKSLVSADREQIVEDVLEKIEKDLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINVGFACRLLRQGMKQIIISSDTPETKSLEKMENKSDADVAIKKSVLCQLMEGNELLGASIENTEALALIIDGKSLTYALEDDVKDLFLALAVGCASVICCRSSPKQKALVTRLVKNKTGCTTLAIGDGANDVGMLQEADIGIGMSGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISLMICYFFYKNIAFGFTLFLYEIYASFSGQVAYNDWFLSLYNVFFTSLPVIALGVFDQDVSARLCLKFPLLYQEGVQNVLFSWKRILGWILNGVMSATIIFFFCINAMENQAFRKGGEVVGLEILGATMYTCVVCVVNFQMALSITYFTYIQHIFIWGGILFWYIFLLTYGTINPSLSTTAYKVLIEACAPAPSYWLITLLVLVASLLPYLVYASIQMRFFPMFHQMIKWMCNEGHATGPEYVDIVRQRSIRHATVGLMARFKASKTSHV* 1191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0638 1190 SUPERFAMILY Calcium ATPase, transduction domain A 146 285 IPR008250 -
Psa1g0638 1190 Pfam Phospholipid-translocating P-type ATPase C-terminal 892 1142 IPR032630 -
Psa1g0638 1190 Gene3D - 701 904 IPR023214 -
Psa1g0638 1190 SFLD Haloacid Dehalogenase 408 915 - -
Psa1g0638 1190 PRINTS P-type cation-transporting ATPase superfamily signature 426 440 - -
Psa1g0638 1190 PRINTS P-type cation-transporting ATPase superfamily signature 750 760 - -
Psa1g0638 1190 PRINTS P-type cation-transporting ATPase superfamily signature 864 883 - -
Psa1g0638 1190 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 6 1187 - -
Psa1g0638 1190 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 57 1149 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Psa1g0638 1190 Pfam Cation transport ATPase (P-type) 523 625 - -
Psa1g0638 1190 CDD P-type_ATPase_APLT_Dnf-like 59 1024 - -
Psa1g0638 1190 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 499 702 IPR023299 GO:0000166
Psa1g0638 1190 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 828 947 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa1g0638 1190 Gene3D - 547 700 IPR023299 GO:0000166
Psa1g0638 1190 ProSitePatterns E1-E2 ATPases phosphorylation site. 428 434 IPR018303 -
Psa1g0638 1190 SFLD p-type atpase 408 915 IPR044492 -
Psa1g0638 1190 Gene3D - 116 288 - -
Psa1g0638 1190 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 6 1187 - -
Psa1g0638 1190 SUPERFAMILY Calcium ATPase, transmembrane domain M 56 1142 IPR023298 -
Psa1g0638 1190 Pfam Phospholipid-translocating ATPase N-terminal 43 107 IPR032631 -
Psa1g0638 1190 SUPERFAMILY HAD-like 421 919 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0638 Psa-Chr1 39635038 39639620 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0638 1 1188 Primary Pumps ATPases AT1G68710 69.098 0.0 1754
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0638 K01530 K14802 gmx:100797039 1977.99