Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci408g0004 ATGGACAATATTATGGAAGATGATGCAACGTACCCTCGAAAGCCCTACGTTTCGAACCGTCCTAATTATTCTCATCGCCAAGAGCATTTGATTCGCGCTGCCCCTTATCATCGACCAGTGATCAGTCGATACGACGAGGGCGGTGAAGATGAAGAAATGGATGAATATGATGTAGGGAATGACCTGGAGGACGATAATGGTGATGGGGAAAATGGTGTGAATATTGACAGCGATGACGGGTTTGAGAGAAACCCGAAGAAAAGGAAATTGCGGAATCCGTCTGTTTCGAACTATGAGTCGGTACCTCATGGGAAGCTTTCACACGGGAATCGAAGCCCAACAGATGAATGGACGGAGCATGCGACGTTTGTTCTGCTGGAGGTTTGGGGGGACAAATTTCTTCAACTTGGGAGAAAGAGCTTAAGGTCTGAGGATTGGCAGGATGTGGCCGAGAAGTTTTCGGAGGAGCTGAAGATGGAGAGGACTGTGGCACAGTGTAGGAATATGTTGGATAAACTGAAAAGAAGGTACAAGAAAGAGAAAGCGAAAGTGGATGAAATGGGGTTGAATTCTAGTAAATGGGCTTATTTTAAGAAGATGGATATGTTAATGGCTTCATCAGCGAGGCAAGAATATGGACTTTCCTGTGGAATGGATTCAGGGGAGTATGTGTTCATGAATACAAGGGTTTATTTAGATCGATCGAATGGGTTGGATGAGATGAGGGATAGCCCTGGGGAGTCAGAGACGTCTGAAGATGATTCGGATGGGCTTCCGCCGAGGAGGACTAGGATTGTAGATAATGATGATGGGGAAGAGTCTTCCTTTAGGGAGTTGGCGGATTCTATTCAGAAGTTTGGTAAAATATATGAGAAAATTGAGAATCGAAAGAGGCGGCAGATGATGGAGTTAGAGAAGATGAGATTGGATTTTAATAGGGAGTTAGAGCTACAGAAGAAGCAGATTTTGGAAAGAGCTCAGGCTGAAATTGCCAGCTTGCAAGAAGGAGATGAGGAGGATTCGGACACATCTACAGAGAATGTTAGTGAATGA 1053 0.4482 MDNIMEDDATYPRKPYVSNRPNYSHRQEHLIRAAPYHRPVISRYDEGGEDEEMDEYDVGNDLEDDNGDGENGVNIDSDDGFERNPKKRKLRNPSVSNYESVPHGKLSHGNRSPTDEWTEHATFVLLEVWGDKFLQLGRKSLRSEDWQDVAEKFSEELKMERTVAQCRNMLDKLKRRYKKEKAKVDEMGLNSSKWAYFKKMDMLMASSARQEYGLSCGMDSGEYVFMNTRVYLDRSNGLDEMRDSPGESETSEDDSDGLPPRRTRIVDNDDGEESSFRELADSIQKFGKIYEKIENRKRRQMMELEKMRLDFNRELELQKKQILERAQAEIASLQEGDEEDSDTSTENVSE 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci408g0004 350 Coils Coil 290 321 - -
Prci408g0004 350 MobiDBLite consensus disorder prediction 328 350 - -
Prci408g0004 350 Coils Coil 163 190 - -
Prci408g0004 350 MobiDBLite consensus disorder prediction 76 93 - -
Prci408g0004 350 MobiDBLite consensus disorder prediction 47 72 - -
Prci408g0004 350 MobiDBLite consensus disorder prediction 236 277 - -
Prci408g0004 350 MobiDBLite consensus disorder prediction 1 114 - -
Prci408g0004 350 Gene3D - 117 179 - -
Prci408g0004 350 MobiDBLite consensus disorder prediction 254 277 - -
Prci408g0004 350 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 94 337 IPR044823 -
Prci408g0004 350 MobiDBLite consensus disorder prediction 333 350 - -
Prci408g0004 350 Pfam Myb/SANT-like DNA-binding domain 115 202 IPR044822 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci408g0004 115 341 Trihelix Transcription Factor Family AT1G54060 31.111 7.73e-20 87.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Prci408g0004 Myb_DNA-bind_4 3.9e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci408g0004 - - qsa:O6P43_007945 449.899