Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4527 ATGGCGTGCCATTCGTTGGGGGGATTGGGTGACGATTTTTTGGAGCAGATCTTGGCCGTGCCCCCTTCTGCTTACGCCAACGGTGAGGGCTCCGCCATGCCTCCAATGGTGTTGCAGTTAGGCTCTGGCGGCGCTGGCTTGACAGAATCCTTAGGCATCGGGATGGCCATGCCTCTGGGCTTGAATTTGGAGCAAGGGTTTCTCCGAGAAGATGCTAGTAGCAGACTCCGCTGCGGTGAAGATGTCATCGAGGCCAACAATGTCACCAACCACCATCTCCATCTTAATAACTCCAACAATACTGCCACCACTTCTTCCTCTCGCACTCCTGACATCTCTGATCGGGACTCAGTGCACAGGACGCCGGGCTTGTTTACGGCGTTTGGACCATTGCATCTTCGGCCGACGACGGTGCCGTCCCACCCTCAACCTCCCCATCATCAGCCATTTCATAGCCAACCACAAAATCCGGGGCCTGTTGCTGCTGGGCCACAACCACCTGCCATCCGCCCTAGAGTGCGAGCAAGAAGAGGGCAAGCCACAGATCCCCATAGTATTGCTGAACGGTTGCGCCGTGAAAGAATTGCTGATAGAATGAAAGCTTTGCAGGAATTAGTTCCCAGCGCCAATAAGACGGACAGAGCGGCGATGCTTGATGAAATTGTGGATTACGTGAAGTTTCTCAGACTCCAGGTCAAGGTCCTTAGCATGAGTAGACTGGGTGGAGCTGGTGCCGTAGCTCAGCTTGTGGCTGATGTTCCTTTGTCTGCAATGGATGCGAGTGAGGGCGTTGACAGCGGGGAGAATCGACAAGCCTGGGAGAAGTGGTCAAATGGTGGCACGGAACAAGAGGTTGCGAAACTGATGGAAGAAGATGTTGGAGCTGCCATGCAATTCCTTCAGTCCAAGGCACTTTGCATCATGCCAATATCTCTGGCTTCAGCCATTTTTCGTACGTCCCAGTCAGATGCTGCTACACTCACCAAGCCCGAACCGAACAGCCATTCCTAG 1011 0.5391 MACHSLGGLGDDFLEQILAVPPSAYANGEGSAMPPMVLQLGSGGAGLTESLGIGMAMPLGLNLEQGFLREDASSRLRCGEDVIEANNVTNHHLHLNNSNNTATTSSSRTPDISDRDSVHRTPGLFTAFGPLHLRPTTVPSHPQPPHHQPFHSQPQNPGPVAAGPQPPAIRPRVRARRGQATDPHSIAERLRRERIADRMKALQELVPSANKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLSAMDASEGVDSGENRQAWEKWSNGGTEQEVAKLMEEDVGAAMQFLQSKALCIMPISLASAIFRTSQSDAATLTKPEPNSHS 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4527 336 MobiDBLite consensus disorder prediction 132 183 - -
Prci1g4527 336 FunFam Transcription factor bHLH66 176 241 - -
Prci1g4527 336 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 179 228 IPR011598 GO:0046983
Prci1g4527 336 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 71 315 - -
Prci1g4527 336 Pfam Helix-loop-helix DNA-binding domain 184 228 IPR011598 GO:0046983
Prci1g4527 336 Gene3D - 174 236 IPR036638 GO:0046983
Prci1g4527 336 SMART finulus 185 234 IPR011598 GO:0046983
Prci1g4527 336 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 177 238 IPR036638 GO:0046983
Prci1g4527 336 MobiDBLite consensus disorder prediction 93 111 - -
Prci1g4527 336 MobiDBLite consensus disorder prediction 137 152 - -
Prci1g4527 336 MobiDBLite consensus disorder prediction 93 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4527 Prci-Chr1 58770234 58781399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4527 150 333 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 71.892 6.69e-79 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci1g4527 HLH 4.3e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4527 - - qsa:O6P43_007633 367.466