Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral5719g00021 | ATGTCTCGGCCTCACCCATCACCGTCCGATCAGACCCAAAAGGAAGAAACCTCACCTTCTACCTTTTCGCATCTTATCAGCACCAGTGATACTAAAACCTTCTCCGTCCCAATCTCACATGGTCAAGTAAGCACCTCTTCTGGGTTTGGGTTGATCCAGAAGCTGGATCGATCCCAGCCTCCACATCAAAATCAAGGTAACAATGTAAGAAAAAGGAACTATAGAGGAGTGAGGCAGAGACCATGGGGGAAGTGGGCAGCCGAAATCCGAGACCCTAAAAAAGCGGCTAGAGTGTGGCTTGGCACCTTCGAGACGGCCGAGGATGCAGCCGCAGCTTATGATGCTGCAGCATTAAGGTTCAAAGGAAGCAAAGCTAAACTTAATTTCCCCGAACGTGTTTCTTTAGCTACTTCTTCAGCCATCCCTTCAGCACAAACCCAGCTTCGTGCTGCTCCTGCTCCGCCGATACAGGAGGCGGCGCAAACTGTGTCTTGGCCTCCGGCGCCATCGACGGACAATGAAGGGTTCCCAAATCTATGGCAGTACGCGCAGCTACTTCGTGGTGGTGATGCCGACCTCCAAAGAGCTGCTTCGGGACTTCATAGTTATCAGAATGATCCGTTTCTTTTTGATTCTTCTACGTTATTCTCGTCATCATCAGGCATGTCTTCTACTTCGTCTGCTTCTATGTCGTCTGGGTCTGATCAACGCCAGGTTCAAGATACGCAGAGAGTAGCACAGGAAGGAGATTATTATGGAGGTTCTTCTTCTCCCGGTTCTTGTTTCCTTGATGAAGGAAACACGAGGAGATAG | 813 | 0.4969 | MSRPHPSPSDQTQKEETSPSTFSHLISTSDTKTFSVPISHGQVSTSSGFGLIQKLDRSQPPHQNQGNNVRKRNYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEDAAAAYDAAALRFKGSKAKLNFPERVSLATSSAIPSAQTQLRAAPAPPIQEAAQTVSWPPAPSTDNEGFPNLWQYAQLLRGGDADLQRAASGLHSYQNDPFLFDSSTLFSSSSGMSSTSSASMSSGSDQRQVQDTQRVAQEGDYYGGSSSPGSCFLDEGNTRR | 270 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral5719g00021 | 270 | SMART | rav1_2 | 73 | 136 | IPR001471 | GO:0003700|GO:0006355 | |
Pral5719g00021 | 270 | PRINTS | Ethylene responsive element binding protein signature | 74 | 85 | IPR001471 | GO:0003700|GO:0006355 | |
Pral5719g00021 | 270 | PRINTS | Ethylene responsive element binding protein signature | 96 | 112 | IPR001471 | GO:0003700|GO:0006355 | |
Pral5719g00021 | 270 | FunFam | Ethylene-responsive transcription factor 2 | 72 | 131 | - | - | |
Pral5719g00021 | 270 | CDD | AP2 | 73 | 131 | IPR001471 | GO:0003700|GO:0006355 | |
Pral5719g00021 | 270 | MobiDBLite | consensus disorder prediction | 146 | 171 | - | - | |
Pral5719g00021 | 270 | Pfam | AP2 domain | 73 | 122 | IPR001471 | GO:0003700|GO:0006355 | |
Pral5719g00021 | 270 | MobiDBLite | consensus disorder prediction | 221 | 270 | - | - | |
Pral5719g00021 | 270 | MobiDBLite | consensus disorder prediction | 1 | 75 | - | - | |
Pral5719g00021 | 270 | SUPERFAMILY | DNA-binding domain | 73 | 131 | IPR016177 | GO:0003677 | |
Pral5719g00021 | 270 | Gene3D | AP2/ERF domain | 72 | 132 | IPR036955 | GO:0003700|GO:0006355 | |
Pral5719g00021 | 270 | ProSiteProfiles | AP2/ERF domain profile. | 73 | 130 | IPR001471 | GO:0003700|GO:0006355 | |
Pral5719g00021 | 270 | PANTHER | DNA-BINDING DOMAIN | 27 | 231 | IPR044808 | GO:0003700|GO:0009873 | |
Pral5719g00021 | 270 | MobiDBLite | consensus disorder prediction | 1 | 72 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral5719g00021 | Pral-Chr5719 | 109845 | 111308 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral5719g00021 | 60 | 144 | AP2-EREBP Transcription Factor Family | AT5G61890 | 77.647 | 4.45e-41 | 140 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Pral5719g00021 | AP2 | 1.2e-13 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral5719g00021 | - | - | gmx:106797385 | 177.563 |