Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5507g00015 ATGGGTGGTGGAAGAGTTGAAGTTGTAAGTAGCAAGGGATGCTCTGGACTGTTTTCACCTTCATTGCCTTTATTCAGGGCTTTGCATCTGCAACCTTTGGAGCCAATGACTCCTGTTTCATCTTTTCACGGTTCTGAACCAGCGGAAGGACGATCAAGTGCTCCTTTTGCTGGTCTCGTTATATGCGTAACCGGTCTATCTAAAGAAGCAAGGAAACAGGTCATGGAGGCGACAGAGAGATTAGGTGGCCAATATAGCCCCCATTTACATCCCCAGTGTACCCATTTGGTGGTTCAGAGCTTTGGTGGGCGTAAGTTTGAGCATGCACTGAAGTACGGCGCAAGAAATGGTCTTTTTATTGTCACACTGGGTTGGTTTGTCGATAGTGTTAGAAAAAATGTGAGGTTGAGTGAATCACTTTACAGTGTAAAGAATTATGGCAATAACAATACGAACTTGGATGATTATAAACTGCTTTCCGGGTATACGAATGCTGAAAATTCTTGTCTTCCTGCAAGTTTTCTTGAAAGCAAGCAAAATGATAAAGCTGAAGAATTTCAAAGATTTTCTGGGCGTGAGTCTACCAAGAATGTGGATCTGCCTTTGTCTGGTTGCTCGATATATGTGGATCCAGACATCTCACCTGAATTGCGAACTAAGGTTGTCGAGACTGCTTCCAGGGAAGGTGCCAGTTTGACTGAACAGTGGTTTGCTGGTTGTAATTCTAGTCATGTGGTCACTGAAGGGGCATCAATTCAAAGATATCTTGGATATTCTAGTAACTTTGTTACACCACTCTGGATTCTAAAAACAGCTAAAGAGAAACAAGTGCAAAGGCTTGTTCACATGTCTGCTGATTTGGCGAGGCAAGTGGGTTTGATGCTTGAGGACATTCATAATGGCGTTACAAAGGAGGAATCACTTAAGCATAATCTCTCTGAAGATCTTCAGGGCGTTAAAACCAAAGGAAGTTACAAAGAAAGGCAGCAAATTGTGAACTCTGCAAAAATAGATGTTAGAAATCGCCGTGGTCGTCGAATGCAGACTTGTCAGACTCCAATGCGTCCTATAACACCTAACAACCTTCTGGATTCCATCTGCTGGTCAATATCTGAACCAACTTCAACAGCTTCGATTTACACTGACTCTTTCAGTGCTGAAGATCCTAGTGAAAATCATTTTTCAACCTTTTGTGATGCAAACGGGGTCGTCAAAGATTTAGAAGCTTCATTTTCAAACGGTACTCAACCTCTAAGAGAAAGTGAGAAATCTGAACTGATATTTAAAAACCATTTTCTTACCATTCTCTTTCCAATTGATCGATTTGCTGAGATGGGTCCTTCGTCAAGAACATTTTTCAGTCACAACGGTTTTACATGCCAGCAGGTGTTGGATCATATATATGCATTTTATCAGGAGAATCTGTTAGCCCATGAAATAGAAGCTGCAATTCATACTGATTCGAGACATGCTGATAGGCTTCGATCAGTGTACTCCAGTAAAGAAACAGCAGAACGTGGGGTTGTGGTGTTCAAAAGGATTGATTTCTTGGGTAGTCGTACGAGTTTTGAAATGTTGAAACGTGTGAGTGGGGACAACAACTCTAACGTCTACGAACTATTACTCAGGGCCTAA 1635 0.4183 MGGGRVEVVSSKGCSGLFSPSLPLFRALHLQPLEPMTPVSSFHGSEPAEGRSSAPFAGLVICVTGLSKEARKQVMEATERLGGQYSPHLHPQCTHLVVQSFGGRKFEHALKYGARNGLFIVTLGWFVDSVRKNVRLSESLYSVKNYGNNNTNLDDYKLLSGYTNAENSCLPASFLESKQNDKAEEFQRFSGRESTKNVDLPLSGCSIYVDPDISPELRTKVVETASREGASLTEQWFAGCNSSHVVTEGASIQRYLGYSSNFVTPLWILKTAKEKQVQRLVHMSADLARQVGLMLEDIHNGVTKEESLKHNLSEDLQGVKTKGSYKERQQIVNSAKIDVRNRRGRRMQTCQTPMRPITPNNLLDSICWSISEPTSTASIYTDSFSAEDPSENHFSTFCDANGVVKDLEASFSNGTQPLRESEKSELIFKNHFLTILFPIDRFAEMGPSSRTFFSHNGFTCQQVLDHIYAFYQENLLAHEIEAAIHTDSRHADRLRSVYSSKETAERGVVVFKRIDFLGSRTSFEMLKRVSGDNNSNVYELLLRA 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5507g00015 544 SMART BRCT_7 53 133 IPR001357 -
Pral5507g00015 544 SMART BRCT_7 199 275 IPR001357 -
Pral5507g00015 544 Gene3D BRCT domain 54 145 IPR036420 -
Pral5507g00015 544 Pfam twin BRCT domain 59 113 IPR001357 -
Pral5507g00015 544 CDD BRCT_TopBP1_rpt2_like 55 133 - -
Pral5507g00015 544 SUPERFAMILY BRCT domain 53 144 IPR036420 -
Pral5507g00015 544 ProSiteProfiles BRCT domain profile. 51 143 IPR001357 -
Pral5507g00015 544 ProSiteProfiles BRCT domain profile. 197 277 IPR001357 -
Pral5507g00015 544 PANTHER BRCT DOMAIN DNA REPAIR PROTEIN-RELATED 3 544 - -
Pral5507g00015 544 Pfam Family of unknown function (DUF6699) 367 528 IPR046522 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5507g00015 Pral-Chr5507 85692 92921 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5507g00015 43 143 Core DNA Replication Machinery Family AT1G77320 38.614 6.52e-13 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5507g00015 - - pcin:129318227 969.918