Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral5337g00037 | ATGACTGCGCCTTCCATCAGATACACCCACCACACTAAACTCGTCTCGCCGGAGGAGCAACACCATCTTTACCGAGGAATGAAGTATCCCAGAGTTGTTAGAATAAGCGTGACAGACGGCGATGCCACGGATTCATCCAGCGATGAAGAAGGAGGGGCTGTCACGCTCCACCGCGGTAGGAGGTTCGTCAACGAGATTACCATCACTCAAAACGATGTCGTTGCTAAGCCTGAGAGCAAGCGTCGCAAGAGTAATAGGAGTGGTAGAGTAATGGGAAGTCGGCGGGCGATGAAAGCGTCGGCGGAGAAGAAGTTCAGGGGAGTGAGGCAGAGGCCGTGGGGGAAATGGGCGGCGGAGATCAGAGATCCTCTGCGACGTGTACGGTTGTGGTTGGGAACGTACGAGACTGCAGAGGAAGCTGCGATGGTGTACGATAAAGCCGCCATTAAGCTGAGAGGAGCAGAGGCACTGACTAATTTCATAACGCCACCGGGGAAGGAGTGCGAGGAGGAGAAGTTGAGCTCCCCGAAATCTGTTCTTCAGTCTCAGAGTGGAAGTTTGTCAGAGGAGGTTGAATCTGTAACAACCAAAGATGATACGATCAGTGAATGTCGGGATGAATCACCGTCGTCGTCATCGTCGGGGTTATCGGAGAATTTCTCAGGGTTGCCGGCGGACATATTCGACTTCGAAACATCGTTGCCGGACATATTTGACGACACTAATATTACAGAAAGCATCTACTCCGATGCGTGGGCCAGTCCCATCGAAAACCTCAACTTGGGTTTCGATTTCGATTCGGGTTTCGGATTCTCAAGTTGGCACAGAGATGACTATTTCCAAGATATCGGCGATTTGTTTGTGACAGATCCGCTTGTTGCTCTCTGA | 888 | 0.5146 | MTAPSIRYTHHTKLVSPEEQHHLYRGMKYPRVVRISVTDGDATDSSSDEEGGAVTLHRGRRFVNEITITQNDVVAKPESKRRKSNRSGRVMGSRRAMKASAEKKFRGVRQRPWGKWAAEIRDPLRRVRLWLGTYETAEEAAMVYDKAAIKLRGAEALTNFITPPGKECEEEKLSSPKSVLQSQSGSLSEEVESVTTKDDTISECRDESPSSSSSGLSENFSGLPADIFDFETSLPDIFDDTNITESIYSDAWASPIENLNLGFDFDSGFGFSSWHRDDYFQDIGDLFVTDPLVAL | 295 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral5337g00037 | 295 | SMART | rav1_2 | 104 | 167 | IPR001471 | GO:0003700|GO:0006355 | |
Pral5337g00037 | 295 | SUPERFAMILY | DNA-binding domain | 104 | 160 | IPR016177 | GO:0003677 | |
Pral5337g00037 | 295 | ProSiteProfiles | AP2/ERF domain profile. | 104 | 161 | IPR001471 | GO:0003700|GO:0006355 | |
Pral5337g00037 | 295 | MobiDBLite | consensus disorder prediction | 75 | 104 | - | - | |
Pral5337g00037 | 295 | Gene3D | AP2/ERF domain | 103 | 162 | IPR036955 | GO:0003700|GO:0006355 | |
Pral5337g00037 | 295 | PRINTS | Ethylene responsive element binding protein signature | 127 | 143 | IPR001471 | GO:0003700|GO:0006355 | |
Pral5337g00037 | 295 | PRINTS | Ethylene responsive element binding protein signature | 105 | 116 | IPR001471 | GO:0003700|GO:0006355 | |
Pral5337g00037 | 295 | FunFam | Ethylene-responsive transcription factor 2 | 103 | 162 | - | - | |
Pral5337g00037 | 295 | PANTHER | SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR | 30 | 192 | - | - | |
Pral5337g00037 | 295 | MobiDBLite | consensus disorder prediction | 166 | 218 | - | - | |
Pral5337g00037 | 295 | CDD | AP2 | 103 | 160 | IPR001471 | GO:0003700|GO:0006355 | |
Pral5337g00037 | 295 | PIRSF | PTI6 | 1 | 272 | IPR017392 | GO:0003700 | |
Pral5337g00037 | 295 | MobiDBLite | consensus disorder prediction | 175 | 191 | - | - | |
Pral5337g00037 | 295 | Pfam | AP2 domain | 104 | 153 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral5337g00037 | Pral-Chr5337 | 226116 | 227068 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral5337g00037 | 1 | 295 | AP2-EREBP Transcription Factor Family | AT4G23750 | 39.833 | 2.85e-60 | 193 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Pral5337g00037 | AP2 | 4.2e-13 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral5337g00037 | - | - | pcin:129323193 | 495.352 |