LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4653g00071	ATGGCAATTCAACGAATTTTAAGTGGTGTCACGGTCAGCTTTTGCATTCTTTTGTTTCTTCTTCTCACTTCAGCGAGTAACTTGAAAGAAAGGGAAGAAACACGAACAGACTTCCTTAGCCAGCTACTCGATCCGTCATCTGGATTGTTATTAGACGACAACACGGCTGACCAGTTATGGTCCTCATGCTTGGTGGGTTTGATTCAGTTAAAGGAAGAGGTAGAAGATCTTGTCATGTGGTTCCCGCAAGAATCATCCCGTAGCACTGATGAAAATTCGAAAATACAATATAGATTGAGAGAAAACATCCAAACATTTATTAATGCTCACCATCTGCAGTTAAAGCAAGCTTTTCTTCATTGTCTGGCACAGAATGATCTGCCATTCCGTGTCTCTGGAGAAGAGGCTAATTCTAAGACATGGCATGCCTCGTTTATAGAATCTATGTTTTCCAGATCCAGCATTCTTAGAAGAAATTTGGCTGAGAATCCTCAACATATATCAGTAGCACCTAGTCCAGGTCCTGCTGTTATGTCCCCAGCTCGGAGTCCAGTTCCATCACCTGAGCTGGCCCCTTCACCTTTCATCTCTCAAGCTCCTAAATCTCGGCACCCTTCTTCATCGCCTAGAACTCCATTCTTCCAACAGCTGGAGCCTCCACCAACTGGGGATGCCACTGCACAGCCATCTTCAGATGCTAATATACAGGCAGATAAGAAAAGTAATCACAAAAGAACAGTTGTTCTTGCCGTAGTAATAACTGCTTTTGTGACATTTGTAATTGCAGCACTGGTATTTTTATGCTGCGGTAGGTTTTATAAGACTGGTCGAGGTAAACGAAATGATGAGAGGCCCCTTCTCAGCTTGAGCATGGGCGACTACTCTATTGGATCTTCCCATTATATTTTTGGAAATTCAGTCAAAGAGGAGAAACTTGGGTTTCAGTCATCAAGTAACAACACTGGTGACCACAAAATGATATCATCGGTGAATGCCAATTCCCATGTCAGCTCCAATATTTTCCATACCACAGTGCAGGAAGCTCAATCAATAGGAGCTGTCAGTTTTGCTGCTGGATCATCAATTGAACAAAAACCTCCTCCTGGGAAGGAGGGAACCACCACTTCCGGATTGCCTCCTCTAAAACCTCCTCCCGGCAGGGTGGGAACCACCAATTCTGGATTGCCTCCTCTAAAGCCACCTCCTGGGAGGGCAGGAACCACCACTTCTGGATTGCCTCCTCTAAAACCTCCTCCCGGCAGACTGAACCCCCTCCCCCCTGAACCGCCTTTCAGAGCTGATACTGCTGCTCCACCCCCTCCACCTCCTGCACCTTCACACCCTGTAAAATCTCACTCTGAATCTGGAGGAGTTCCAACTCCTGGACCTTCTCCCCCTTCTGCACCCCCACAGCCTGTGACACTTCATTCTAATGCTGGTGGAGCTCCGCCTCCTGGACCTCCACCACCACCACCATCACCACCAATGCCACCTGGTACCCGACCAGGTGTTCATCCATCTCCACCTCCTCCTCCAAAAGGTGGTATAGCTCCCCCACGACCTCCTCCACCTATTGGTCCAAAGATAGGGCAGCTAAAATCTCCACAGAATGCAGGAGCTGGTTCAGAAGGGGAAGCCCATGCTCCTAAAGCCAAGCTAAAACCTTTTTTCTGGGATAAGGTGCAAGCCAACTCAGATCATTCGATGGTCTGGAACCAGATTAAATCAGGATCATTCCAGTTTAATGAAGAGATGATAGAGACTCTTTTTGGCTACAGTAATGTGGATAAATGCAAAGGCGAACCGAAGAAACAGTCATCATCCCAAGACCCTGCAACTCAGTTTATCCAGATAATTGACAGGAAGAAAGCACAAAATTTGTTGATTTTGTTGCGAGCCTTGAACATCTCAACGGAAGAAATTTGTGATGCACTTCATGAGGGAAATGAGCTTCCCTCAGAATTTCTGCAAACCTTGCTGAAGATGGCACCAACATCCGAGGAAGAACTTAAACTTAGACTTTTCAGTGGTGAAATGTCCCAACTTGGCCCTGCAGACCGATTCATAAAAGCTTTGGTTGACATTCCATTTGCTTTTAAACGAATGGAAGCATTGCTTTTCATGAGTACTTTTCAAGAGGATCTCACTGCTACTAAGGAGTCCTTTGCAACTTTAGAGGTTGCATGTAAGGAGCTAAGAAGCAGTCGGCTGTTCCTCAAGCTTCTAGAAGCTGTTCTTAAAACCGGAAACCGAATGAATGATGGTACATATCGTGGCGGTGCACAAGCATTTAAACTTGATACGCTACTGAAATTGTCTGATGTGAAAGGAACGGATGGCAAGACCACACTCTTACACTTCGTAGTCCAAGAGATAGTCCGCTCTGAGGGCAAAAGAGCTGTTCGACTGGAAAAAGAAAACCAGGGTTCCTTTGACATCAAAAAAGATGGCTGTCTTGAGGATGTATCTGATGAAACTGAGGAACGCTATCACGATCTTGGTCTTCAGGTGGTTTCACATTTGAGCAGCGAACTAGAAAATGTTAAGAAAGCAGCGGCTATTGATGCTGACAGCTTAACGGGAACTGCTGCCAAACTTGGCCATGGCCTCCTTAAAATCAGAAATTTTGTGAACACTGACTTGAAGAGCATAGAGGAAGATAGAAAATTTTGTCAGGCGGTGAAGGCTTTTGTGCAGGATGCTGAGAATGATGTCACTAGTCTGCTGGAAAAAGAGAAGAACATCATGGCTCTGGTGAAGAGCACTGGTGATTATTTCCACGGGAAAGCTGGGAAAGATGAAGGATTGCGGTTGTTCATGATTGTACGGGACTTCTTGATGATGTTAGATAAGGTGTGCAAGGAGGTGAAAGACGCCCAGAAGAAGCAAACAAAAGCTCAAAAGCAAGAGGCGCCTAAAGCATCATCTTCCTCTGATGTTCGTTCATCACCTGATTTTCGTCAGCTGCTATTCCCAGCAATTGCAGATAGGCGGGTGAAAGACGATAGTTCAGACGAGGAGAATGAACCTTGA	3033	0.4563	MAIQRILSGVTVSFCILLFLLLTSASNLKEREETRTDFLSQLLDPSSGLLLDDNTADQLWSSCLVGLIQLKEEVEDLVMWFPQESSRSTDENSKIQYRLRENIQTFINAHHLQLKQAFLHCLAQNDLPFRVSGEEANSKTWHASFIESMFSRSSILRRNLAENPQHISVAPSPGPAVMSPARSPVPSPELAPSPFISQAPKSRHPSSSPRTPFFQQLEPPPTGDATAQPSSDANIQADKKSNHKRTVVLAVVITAFVTFVIAALVFLCCGRFYKTGRGKRNDERPLLSLSMGDYSIGSSHYIFGNSVKEEKLGFQSSSNNTGDHKMISSVNANSHVSSNIFHTTVQEAQSIGAVSFAAGSSIEQKPPPGKEGTTTSGLPPLKPPPGRVGTTNSGLPPLKPPPGRAGTTTSGLPPLKPPPGRLNPLPPEPPFRADTAAPPPPPPAPSHPVKSHSESGGVPTPGPSPPSAPPQPVTLHSNAGGAPPPGPPPPPPSPPMPPGTRPGVHPSPPPPPKGGIAPPRPPPPIGPKIGQLKSPQNAGAGSEGEAHAPKAKLKPFFWDKVQANSDHSMVWNQIKSGSFQFNEEMIETLFGYSNVDKCKGEPKKQSSSQDPATQFIQIIDRKKAQNLLILLRALNISTEEICDALHEGNELPSEFLQTLLKMAPTSEEELKLRLFSGEMSQLGPADRFIKALVDIPFAFKRMEALLFMSTFQEDLTATKESFATLEVACKELRSSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVQEIVRSEGKRAVRLEKENQGSFDIKKDGCLEDVSDETEERYHDLGLQVVSHLSSELENVKKAAAIDADSLTGTAAKLGHGLLKIRNFVNTDLKSIEEDRKFCQAVKAFVQDAENDVTSLLEKEKNIMALVKSTGDYFHGKAGKDEGLRLFMIVRDFLMMLDKVCKEVKDAQKKQTKAQKQEAPKASSSSDVRSSPDFRQLLFPAIADRRVKDDSSDEENEP	1010

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4653g00071	1010	MobiDBLite	consensus disorder prediction	994	1010	-	-
	Pral4653g00071	1010	Gene3D	Formin, FH2 domain	548	983	IPR042201	-
	Pral4653g00071	1010	MobiDBLite	consensus disorder prediction	960	1010	-	-
	Pral4653g00071	1010	MobiDBLite	consensus disorder prediction	177	193	-	-
	Pral4653g00071	1010	MobiDBLite	consensus disorder prediction	412	448	-	-
	Pral4653g00071	1010	MobiDBLite	consensus disorder prediction	360	548	-	-
	Pral4653g00071	1010	ProSiteProfiles	Formin homology-2 (FH2) domain profile.	543	975	IPR015425	-
	Pral4653g00071	1010	PANTHER	FORMIN-RELATED	456	997	IPR027643	GO:0003779\|GO:0030036\|GO:0045010\|GO:0051015
	Pral4653g00071	1010	SMART	it6_source	543	963	IPR015425	-
	Pral4653g00071	1010	MobiDBLite	consensus disorder prediction	166	240	-	-
	Pral4653g00071	1010	SUPERFAMILY	Formin homology 2 domain (FH2 domain)	487	967	-	-
	Pral4653g00071	1010	MobiDBLite	consensus disorder prediction	221	236	-	-
	Pral4653g00071	1010	MobiDBLite	consensus disorder prediction	969	984	-	-
	Pral4653g00071	1010	MobiDBLite	consensus disorder prediction	199	213	-	-
	Pral4653g00071	1010	Pfam	Formin Homology 2 Domain	545	949	IPR015425	-
	Pral4653g00071	1010	Coils	Coil	949	969	-	-
	Pral4653g00071	1010	MobiDBLite	consensus disorder prediction	481	529	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4653g00071	Pral-Chr4653	385054	391009	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4653g00071	516	999	FH2 protein (formin) Gene Family	AT5G54650	64.344	0.0	604

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4653g00071	-		-	pcin:129315422	1454.88