LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4623g00008	ATGGAGAGAAGGGGAAGAGAATCTCTCATATTTGTGAGCTTATTATGCCTAATGGTAACCCTAACAGAGTCTGCGACTGTGACCATACCAGTAGGAGTGATTCTGGATTTGAACTCATCACTTGGTAGTATCACCCTCAACTGCACCAACCTCGGACTCCTCGACTTCTATTCCACACATGATTCCTACGCGACCAGGCTCCAACTCCATTTCTGGCATTCTGGAAACGATCTCCTCACTGCAGCTATTGCAGCTTGGAATCTGATAAATGGAAAAAAGGTGCATGCAATCCTGGGACCTCAAAACTCAGAGCAAGCGAGGTATGTTGTAGAACTTGGTAAGACGAACGATGTACCAGTGATTTGGTTTTCTCCATCTGGTCCATCTCTGTTGCCACCTCGTACCCGATTCTTCATCCACTCCAACTCCACCAGAAGCCATTGCTCTCAGTTCGAAGCTATAGCAGCCATTATCGAAGCTTATGATTGGCAGTCTGTGATCCCCATTTATGAAGATCCAGAATTCGGCAACGACCTCATTCCGTGCCTCTCTTATGCCCTGCAAGACATGGACACTCGAATGCCTTACATAAGTGTCATCAATCAAACTTCCACGGATTCTCAAATCGCCGGTGAGCTTAACAAGATAAAAGCCCAGCGAACATTTGTGTTTGTCGTTCATATGTCTCTGGAGCTTTGGTCAATATTTGCGGAACATGCCAAAAATGCGGACATGATGAGCGAAGGATACGCTTGGATACTTACGCAAGGCCTGTCTTCTGTGATGGATCCCGAAGCTTTAGATGTCAGAATGAAAGGCTATATGGATGGTGCGTTGGGTGTGAGGCCATTCGTGTTATCCAACTTAACTAAGCGCCTTTCCTTAGTTAGAAAATTAAAGTCTGAGTACGATAAAACTCTTTCTCTAAATGGCTTGTGGGCTTATGACACTATCACAGCATTGGCCAGAGCCGTAGAGAAGGCCGGCTTAGTCAGTTTTAATGAAAGTGGAGCTGATCTTCGCAACGAAACAGGCCCAGAACTTCGCGGAGCAATTCTGGATACTGATTTCGTTGGCTTGTCAGGGAATTTCAATTTGAGGCAAGAACAACTAGAACAATCACATGTTGTGGTATACAATGTGCAAGGCCAAAAAGAAAGGACAATTGGAAATTGGAGCCCCGAAAAAGGACTTGTTCGAATGCAAAGTGTACGTGGTGAACCAATATGGCCGGGTAACACAAAGGAGATACCACCCAAGTTGAAAGTTGGGGTCCCAAAGACGCATTTTACTGAATTTGTTGATGTTAATGGGAGTGTAGAAGGGCAACATGTATCAGTTGCTGGCTTTGCTGTTGATGTATTTGAGCAAGTGGTTGGCCTCTTGCCATTACCTTTACGTTATGAGTTTGTGCCTTTGAACAACAGTGGTGGAGAGCTGACTCCCTTCAGCTATGATGATCTTCTCTGCCAATTCGCAGACAAGAAAGTTGATGTTGATGTTATAATTGGAGACATTACAATTGTAGTGAGTCGCACAAATTGTGTTGATTTCACAATGCCGTATTTAGATTCAAGTGTGTCCATGGTGGTAAAGGTGAGGTCTGACTCCAAAAGCATGTGGATCCTCTTCAGACCTTTTGATTGGTTACTTTGGTTCATTCTTGTTATGATTCTTGTGGCTGCAACTGTTTTTGTAATTATATTGGAAAAACAAAAAGAAAAGAAAACGGAGGATGATGTCACGGGAAGCAAATCCGAAATTAAAACAAAGGATGATGTTAGAGGAAGCAAATCTGCAAATAAAACAGAGGAAAATGTCGAAGGAAGCAAATCCAAAGAAAACACAGAGGATGATGTCACAGAAAGCAAAGCTGAAAATAAAACAGAGGATGATGTCAGAGGAAGCAAATCCGAAAATAAAACAGAGGATGATGCTGGAGGAAGCAAATCCCAAGACTTTGTCCGCAATCCCTTCCTTATTTACATGAGTGATAGGACAAACCCAAAGCCACCTCCATGGAAGGACGTGCAAGAGATTAGAAGGAGCAATCGGAAAGTGGGATATCAAACGGATTCCTGGATGAGAGTGTTTCTTACTCACCAATTAGGATTGAAGGATGATCAGTTAAGGAATTTTACAAGTCGTGAAGAGTACATGGATGCTTTATCAAATGAAGACAAAGAAAATGGAGGAGTGGATGCTATTTTTGATGAAACTCCTTATCTCAGGCTCTTCCTTTCCCAATGCCCTTCTTGCCAAATGGCAGGACCAATCTACAAAGCTGGTGGATTTGCCTTTGCATTCCCAAAGAACTCTACCTTGGTCTCAAATTTTTCAACTGCAATATTGGAAGTGACTCAAAATGTGACGATGTTTCGTCAGATGAGGGAGAAAATATCTTTCCCCATCACAGTTGACAGATCCGAATATAAAAGTAGCATTGAGACGCGAAGTTTGAAGATAGGCGACTTTGGAGGCCTTTTCCCAATCATATTGTTTGTTTTGGTTCTCTTCTTCTGCCTTTCAATTCGTAACAAATTGGTTTCATGTTGGCACAATCTCTGGCGGAGAGAGTAA	2580	0.4279	MERRGRESLIFVSLLCLMVTLTESATVTIPVGVILDLNSSLGSITLNCTNLGLLDFYSTHDSYATRLQLHFWHSGNDLLTAAIAAWNLINGKKVHAILGPQNSEQARYVVELGKTNDVPVIWFSPSGPSLLPPRTRFFIHSNSTRSHCSQFEAIAAIIEAYDWQSVIPIYEDPEFGNDLIPCLSYALQDMDTRMPYISVINQTSTDSQIAGELNKIKAQRTFVFVVHMSLELWSIFAEHAKNADMMSEGYAWILTQGLSSVMDPEALDVRMKGYMDGALGVRPFVLSNLTKRLSLVRKLKSEYDKTLSLNGLWAYDTITALARAVEKAGLVSFNESGADLRNETGPELRGAILDTDFVGLSGNFNLRQEQLEQSHVVVYNVQGQKERTIGNWSPEKGLVRMQSVRGEPIWPGNTKEIPPKLKVGVPKTHFTEFVDVNGSVEGQHVSVAGFAVDVFEQVVGLLPLPLRYEFVPLNNSGGELTPFSYDDLLCQFADKKVDVDVIIGDITIVVSRTNCVDFTMPYLDSSVSMVVKVRSDSKSMWILFRPFDWLLWFILVMILVAATVFVIILEKQKEKKTEDDVTGSKSEIKTKDDVRGSKSANKTEENVEGSKSKENTEDDVTESKAENKTEDDVRGSKSENKTEDDAGGSKSQDFVRNPFLIYMSDRTNPKPPPWKDVQEIRRSNRKVGYQTDSWMRVFLTHQLGLKDDQLRNFTSREEYMDALSNEDKENGGVDAIFDETPYLRLFLSQCPSCQMAGPIYKAGGFAFAFPKNSTLVSNFSTAILEVTQNVTMFRQMREKISFPITVDRSEYKSSIETRSLKIGDFGGLFPIILFVLVLFFCLSIRNKLVSCWHNLWRRE	859

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4623g00008	859	Pfam	Bacterial extracellular solute-binding proteins, family 3	447	792	IPR001638	-
	Pral4623g00008	859	MobiDBLite	consensus disorder prediction	578	652	-	-
	Pral4623g00008	859	Gene3D	-	764	792	-	-
	Pral4623g00008	859	SMART	GluR_14	420	803	IPR001320	GO:0015276\|GO:0016020
	Pral4623g00008	859	Gene3D	-	419	544	-	-
	Pral4623g00008	859	MobiDBLite	consensus disorder prediction	578	650	-	-
	Pral4623g00008	859	PANTHER	IONOTROPIC GLUTAMATE RECEPTOR	676	844	IPR015683	-
	Pral4623g00008	859	Gene3D	-	669	763	-	-
	Pral4623g00008	859	Gene3D	-	66	373	-	-
	Pral4623g00008	859	SUPERFAMILY	Periplasmic binding protein-like II	419	789	-	-
	Pral4623g00008	859	Pfam	Receptor family ligand binding region	64	383	IPR001828	-
	Pral4623g00008	859	SUPERFAMILY	Periplasmic binding protein-like I	28	419	IPR028082	-
	Pral4623g00008	859	Gene3D	-	146	398	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4623g00008	Pral-Chr4623	165321	170696	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4623g00008	672	858	Ion Channels	AT2G29110	33.673	5.34e-19	90.5

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4623g00008	K05387		-	qsa:O6P43_022275	418.313