Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4496g00001 ATGCAGCCATATCAGCTCAAGAAGGATATTAAAGAATTGGGTTTCTTCACTGAGTATGGGGATGCCAATAGATACAAGCTTCTTGAAGTTATAGGGAAGGGCAGCTATGGAGTTGTTTGTGCGGCGATTGACACACACACTGGAGAAAAAGTAGCAATAAAGAAGATCCACGATGTTTTTGACCATGCATCTGATGCCATTAGAATTCTTCGTGAAGTTAAATTACTCAGGCTTTTAAGGCACCCTGATATCGTAGAAATTAAGCGGATAATGATGCCACCTTCAAAGAGAGATTTCAAAGATATTTATGTAGTCTTTGAGCTCATGGAATCTGATCTCCATCAAGTCATTAAAGCTAATGATGATTTGACCCGTGAACATCATCAGTTTTTTCTTTATCAGCTCCTACGTGCATTGAAATATATGCACACAGCAAATGTGTATCACAGAGACCTCAAACCCAAGAACATACTGGCAAATGCAAATTGCAAACTCAAAATTTGTGATTTTGGACTGGCAAGAGTTGCATTCAACGATGCTCCTACAACAATATTTTGGACAGATTATGTTGCTACTAGGTGGTACAGGGCCCCAGAACTCTGTGGAGCATTCTCTTCTAAGTATACACCGGCAATTGATATATGGGGTATTGGTTGCATCTTTGCTGAGGTCCTCACCGGAAAGCCATTGTTTCCTGGTAAAAGTGTTGTACATCAATTGGATTTGATTACTGATCTCCTTGGGACCCCATCAGCAGATACTATTTCAGGAGTTCGAAATGAGAAGGCAAGAAAATACTTGATGGAAATGAGGAAAAAACGGCCTGTGCCTTTTGAGCAGAAATTTCCAAATGCAGATTCTTTGGCGCTGCGCCTTTTGCGAAGGCTTCTAGCATTTGATCCCAAAGATAGGCCAACTGCTGAAGAGGCACTAGCTGATCCTTATTTCAAGGGCTTGTCCAAAGTTGAGAGAGAACCTTCTTGTCAGTCAATTTCAAAGTTGGAATTTGAGTTTGAGAGGCGAAGGTTGACAAAGGAGGATATTAGAGAATTAATATATCGTGAAATACTGGAATATCACCCTCAGATGCTTAAAGATTACATAAATGGAACTGAAGGCAATTTTCTCTATCCTAGTGCAATAGGCCAATTCAGAAAGCAATTTGCTTATCTGGAGGAAAATGGTGGCTCAGTGACTCCTCCAGAAAGGAAGCATGCCTCCCTTCCGAGGCCTGCTATTTACTCGGCTACGGTCCCTCTTAATACAAAGCCAAATTTCAATTTGTACGAGAACAAACAAAATGCAGAAGAGGCATATAAGAGTTTAAGAGAAGCTGAATCAAATGCTGGAAGTCAATGGAGGGGTTCCCGGCCTCCGCCAAGAGCGCCAGCAGCTAAGCCCGGGAGAGTGGTAGGCCCAGTTGTACCTTACGAAAACGGGAGAATCGCAAATACTTTTTATGATTCAAGGATCTTTTATCAAAATGCTCTTCCCCAAGTGGCTGGTTCTCCTCACTGCTTTTTCAGACCTCAACCGACAAACTCACAGAAGACTGTATCAGAGATACACCAGGTTTTTTCACAATGCAAGCATCAAGTCCCATTCCAGCAGTGTCACCACCTAGCCAGACCTGCAATTGACCTCAACTCGAACCCATACCAACAACAAACCACCATTGACCGGTTTGATAATCCCATGATTACAGTTGATACGAAGCTGCAGCAGGCACAATCTCACTTTGGTGCAGTTGGCGCTGCAGATGTGGCCATCGCAGCTCATAGACATTCTGGTGCTGTTCAGTATGGATTGTCATAG 1815 0.427 MQPYQLKKDIKELGFFTEYGDANRYKLLEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFDHASDAIRILREVKLLRLLRHPDIVEIKRIMMPPSKRDFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQLLRALKYMHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDAPTTIFWTDYVATRWYRAPELCGAFSSKYTPAIDIWGIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSADTISGVRNEKARKYLMEMRKKRPVPFEQKFPNADSLALRLLRRLLAFDPKDRPTAEEALADPYFKGLSKVEREPSCQSISKLEFEFERRRLTKEDIRELIYREILEYHPQMLKDYINGTEGNFLYPSAIGQFRKQFAYLEENGGSVTPPERKHASLPRPAIYSATVPLNTKPNFNLYENKQNAEEAYKSLREAESNAGSQWRGSRPPPRAPAAKPGRVVGPVVPYENGRIANTFYDSRIFYQNALPQVAGSPHCFFRPQPTNSQKTVSEIHQVFSQCKHQVPFQQCHHLARPAIDLNSNPYQQQTTIDRFDNPMITVDTKLQQAQSHFGAVGAADVAIAAHRHSGAVQYGLS 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4496g00001 604 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 362 - -
Pral4496g00001 604 SUPERFAMILY Protein kinase-like (PK-like) 21 320 IPR011009 -
Pral4496g00001 604 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Pral4496g00001 604 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Pral4496g00001 604 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4496g00001 604 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4496g00001 604 Coils Coil 425 445 - -
Pral4496g00001 604 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Pral4496g00001 604 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Pral4496g00001 604 MobiDBLite consensus disorder prediction 441 468 - -
Pral4496g00001 604 CDD STKc_TDY_MAPK 24 361 - -
Pral4496g00001 604 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4496g00001 604 FunFam Mitogen-activated protein kinase 15 119 - -
Pral4496g00001 604 FunFam Mitogen-activated protein kinase 111 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4496g00001 Pral-Chr4496 14065 20603 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4496g00001 1 602 MAP Kinase Gene Family AT1G53510 67.203 0.0 783
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Pral4496g00001 Pkinase 1.3e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4496g00001 - - gmx:100800878 945.266