Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4047g00003 ATGGAATCCCAAAACCAAGACCAATATTCAGCATCAAGACTCCTTCATGCTCAAACCCACATATGGAACCACATCTTCAGCTTCATAAACTCAATGTCCCTCAAATCTGCAATAGATTTGAATATTCCAGATACCATTCACAAGCATGGCAAACCCATGCCTCTTTCTCTTCTCATCTCTTCCCTTCAAATCCATCCTTCCAAAACTCGCAATATCTATCGCTTAATGCGAATCCTCACCCATTCTGGCTTCTTCTCTCTCCAGAAACTTCCTGATGAAGCAGAAGGCTATGTCCTTACGGATGCATCGATCCTTCTTTTGAAGGACAATCCCTTAAGCGTCACCCCTTTCTTGCTCGCCATGTTGGATCCCATCCTAACCAAGCCCTGGTATGAGGTGGCCAATTGGTTCCAGAACGACGATCCGACGCCGTTTGATACGGCACATGGAAAGACGTTTTGGGAGTATGCTGGGGTTGAACCAAAGCTTAATCATTTTTTCAATGATGCTATGGCTAGTGATGCCAGATTGGTGACCAGTGTGGTCATCGAGAAGTGTAAGGGTGTGTTTAAGGGATTAGAGTCATTAGTTGATGTCGGGGGTGGTACTGGGACAGTGGCTAAGGCTATTGCTAAAGCATTTCCAGAAATACAATGTACTGTGTTCGATCTCCCACACGTTGTTGATGGCCTCCAAGATAGTGGGAATCTCAAGTTTGTGGGAGGAGACATGTTCGAGGCCATTCCTCCTTCTGATGGCATACTATTGAAGTGGATTCTACATGATTGGAACGACGAGGAATGTGTGAAGATACTGAAGAAGAGCAAGGAGGCAATTAGAAGCAAAGGGAAGGTGATTATAATAGACATGATGATGGAGAATGCTAAGGGAGATATTGATGATGAATCGGTTGAAACACAATTGTTCTTTGATATGCTGATGATGGTTTTGGTGACTGGAAAAGAGAGGAATGAGAAAGAGTGGGCCAAGTTGATCTTCTCTGCTGGTTTTAGTGACTATAAAATTACTCCAGTTTTAGGACTAAGATCTCTCATTCAGGCTTTTCCCTGA 1071 0.437 MESQNQDQYSASRLLHAQTHIWNHIFSFINSMSLKSAIDLNIPDTIHKHGKPMPLSLLISSLQIHPSKTRNIYRLMRILTHSGFFSLQKLPDEAEGYVLTDASILLLKDNPLSVTPFLLAMLDPILTKPWYEVANWFQNDDPTPFDTAHGKTFWEYAGVEPKLNHFFNDAMASDARLVTSVVIEKCKGVFKGLESLVDVGGGTGTVAKAIAKAFPEIQCTVFDLPHVVDGLQDSGNLKFVGGDMFEAIPPSDGILLKWILHDWNDEECVKILKKSKEAIRSKGKVIIIDMMMENAKGDIDDESVETQLFFDMLMMVLVTGKERNEKEWAKLIFSAGFSDYKITPVLGLRSLIQAFP 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4047g00003 356 PANTHER O-METHYLTRANSFERASE 15 341 IPR016461 GO:0008168
Pral4047g00003 356 Gene3D - 3 106 IPR036388 -
Pral4047g00003 356 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 352 IPR029063 -
Pral4047g00003 356 PIRSF O-mtase 1 356 IPR016461 GO:0008168
Pral4047g00003 356 Pfam Dimerisation domain 32 80 IPR012967 GO:0046983
Pral4047g00003 356 CDD AdoMet_MTases 196 288 - -
Pral4047g00003 356 Pfam O-methyltransferase domain 130 338 IPR001077 GO:0008171
Pral4047g00003 356 SUPERFAMILY "Winged helix" DNA-binding domain 12 111 IPR036390 -
Pral4047g00003 356 FunFam O-methyltransferase ZRP4 108 356 - -
Pral4047g00003 356 Gene3D Vaccinia Virus protein VP39 107 356 IPR029063 -
Pral4047g00003 356 FunFam Coniferyl alcohol 9-O-methyltransferase 4 106 - -
Pral4047g00003 356 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 356 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4047g00003 Pral-Chr4047 35303 36664 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4047g00003 32 342 Monolignol Biosynthesis Gene Families AT5G54160 33.438 1.07e-54 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4047g00003 - K16040 qsa:O6P43_028865 571.622