Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1492g00004 ATGGGAGTTTCTTCACAGCCTTCGCTTGCTCCCTTTTCTTTCAAAGACTTGGTGAAGAAGGGGGCTCAAGTTGAAACCCAGAACTCGTCTTGTGGGCATCTGCGGAGAAAAGTGAAGGAATCTCAGAAGGCAGTGAGCAAAAAAAGCGTTAACAGCAGAAGGCGAGGAAGGATTCTAATGAAGAGGAGGGCTCGCTTAATGGAAGGTTGTAGAAGAGGAGACAACAAGATGGAGAGGAGGATGACGAAGTTGAAGAGGCTCATACCCGACGGCGAGCGCATGGGGTTGGATGGACTCTTCAGAAAGACGGCCGATTACATTTTGGCTTTGCAAATGAGAGTGAGGGTCATGCAGATTATGGTTAAGGTATTGACGGCTTCTGATAAGTGA 390 0.4795 MGVSSQPSLAPFSFKDLVKKGAQVETQNSSCGHLRRKVKESQKAVSKKSVNSRRRGRILMKRRARLMEGCRRGDNKMERRMTKLKRLIPDGERMGLDGLFRKTADYILALQMRVRVMQIMVKVLTASDK 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1492g00004 129 MobiDBLite consensus disorder prediction 32 47 - -
Pral1492g00004 129 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 74 124 IPR036638 GO:0046983
Pral1492g00004 129 CDD bHLH_AtIBH1_like 68 121 IPR044549 GO:0006355
Pral1492g00004 129 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 35 124 IPR044660 GO:0006355
Pral1492g00004 129 MobiDBLite consensus disorder prediction 25 55 - -
Pral1492g00004 129 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 61 110 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1492g00004 Pral-Chr1492 27543 27932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1492g00004 59 128 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 50.704 1.00e-16 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1492g00004 - - vum:124832498 113.235