Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02680 ATGGCTGCACCACTAGGCAATAGGCTCCAAAGCATGTTGCAGGCTGCGGTGCAATCTGTTCACTGGACTTATAGCCTCTTCTGGCAACTTTGTCCACAACAAGTGATTCTGGTTTGGGGTGATGGGTACTACAATGGGGCAATCAAGACTAGGAAGACGGTGCAACCAATGGAGGTGAGTGCTGAGGAGGCATCTCTCCAAAGAAGCCAGCAACTTAGAGAACTCTATGAATCATTGTCTGCCGGAGAGACAAATCCGCCAACTCGCCGGCCTTGCGCCGCCTTGTCACCAGAGGACCTAACAGAATCCGAATGGTTCTATTTGATGTGTGTCTCATTCTCCTTTCCTCCTGGTGTTGGGTTGCCTGGAAAGGCATATGCTAGGAGGCAGCATGTTTGGCTCACTGGTGCAAACGAGGTGGACAGCAAAACATTTTCACGAGCTATTCTAGCCAAGAGTGCTCGAATACAGACAGTGGTGTGCATTCCATTATTGGACGGAGTGGTTGAGTTCGGTACAACGGATAAGGTTCAAGAAGACCTTAACTTCATTCACCACGTGAAGACATTCTTCACAGACCACCACCACCCTCTGCCGCCCAAGCCCGCCCTGTCCGAGCACTCAACCTCCAACCCCATCTCCTCCTCCGACCACAACCCCGCCGTCATGTACACCGTCGCAGACCCACCCAATCCTACCCAAAACGACGAGATGGACGAAGAGGAAGAGGAAGAAGACGAAGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGCGGAGTCCGCCTCTGAGGACGAAACCGGAGGCCGCATTCCCGGCCAGGTCACGACGCCGGAGATGGAGGACGTCACGGGGGCGGAGCCCAGCGAGCTGATGCAGCTGGAGATGCCGGAGGATATCCGGGTCGGGTCTCCAAACGACGGATCGAACAACTTGGACTCGGACTTCCATTTGCTGGCGGTGAGTCAAGGAGGTAGCGCGGCGGGGCAAGCTGAGTCGACCCTGAGATGGGGCCCGAGTCAAGAGGCATTACAAGTTCAACTACCAGCTTCAGCCCCTCATCTATTAGAAGACTTAACTCAAGAGGACAATCACTACTCTGAAACTGTATCCAACATCCTCCAAAACCAGTCCAGCCGGTGGCCAACCTCGCCGACCTCCGTTGGCTACATCACATATTCCCCGCATTCAGCTTTCGCAAAGTGGAGCAGCCGCGCCAGCCACCTCTTCCAGCCGGCGGTGGACGGCCCCAGCCAGTGGCTCCTCAAGTACATTCTCTTCACGGTCCCCTACCTCCACGCCAAGAACCCCGCCGACACTTCTCCCCAAACCGCCGCCGACCCCAAGCTGCGCGGCAAGGGAACGCCGCAGGACGAGCTGAGCGCCAACCACGTGCTCGCGGAGCGCCGCCGCCGCGAGAAGCTGAACGAGCGGTTCGTAATCCTGCGGTCACTGGTCCCCTTCGTCACGAAAATGGACAAGGCATCCATTCTGGGTGACACCATCGAGTATGTAAAGCAGCTGCGGCGGAAGATCCAGGAGCTGGAGGCGCGAAACCGCCACACTGAGGCCGAACATCGTTCCAAGCTCCCTGAGGTAACGGTTCAAAGGACGAGTAGCAATTCGAGCAAGGAGCAGCAGAGGAGTGGGGTGACGGTGATGGAGAAGAGAAAGGTGAGGATCGTGGAAGGGGTGGCTGCGAAGGCGACGGCGGTGGAGGCTGAGGCGGCAACATCAGTGCAAGTTTCGATCATTGAGAGCGATGCACTGTTGGAGATTGAGTGCCTCCACAGAGAAGGGTTGCTTCTTGACGTGATGCAGATGCTGAGGGAGGTGAGGATAGAGGTTATTGGGGTGCAATCATCACTTAACAATGGGGTGTTCATGGCGGAGTTGAGGGCTAAGGTGAAGGAACATGCGAACGGGAAGAAGGTGAGCATTGTGGAAGTGAAGAAAGCACTCAACCGAATCATTCCCCACGCTGTCCACTGA 1992 0.5617 MAAPLGNRLQSMLQAAVQSVHWTYSLFWQLCPQQVILVWGDGYYNGAIKTRKTVQPMEVSAEEASLQRSQQLRELYESLSAGETNPPTRRPCAALSPEDLTESEWFYLMCVSFSFPPGVGLPGKAYARRQHVWLTGANEVDSKTFSRAILAKSARIQTVVCIPLLDGVVEFGTTDKVQEDLNFIHHVKTFFTDHHHPLPPKPALSEHSTSNPISSSDHNPAVMYTVADPPNPTQNDEMDEEEEEEDEEEEEEEEEEEEAESASEDETGGRIPGQVTTPEMEDVTGAEPSELMQLEMPEDIRVGSPNDGSNNLDSDFHLLAVSQGGSAAGQAESTLRWGPSQEALQVQLPASAPHLLEDLTQEDNHYSETVSNILQNQSSRWPTSPTSVGYITYSPHSAFAKWSSRASHLFQPAVDGPSQWLLKYILFTVPYLHAKNPADTSPQTAADPKLRGKGTPQDELSANHVLAERRRREKLNERFVILRSLVPFVTKMDKASILGDTIEYVKQLRRKIQELEARNRHTEAEHRSKLPEVTVQRTSSNSSKEQQRSGVTVMEKRKVRIVEGVAAKATAVEAEAATSVQVSIIESDALLEIECLHREGLLLDVMQMLREVRIEVIGVQSSLNNGVFMAELRAKVKEHANGKKVSIVEVKKALNRIIPHAVH* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02680 663 Gene3D - 460 531 IPR036638 GO:0046983
Phac7g02680 663 MobiDBLite consensus disorder prediction 198 281 - -
Phac7g02680 663 Pfam Helix-loop-helix DNA-binding domain 462 509 IPR011598 GO:0046983
Phac7g02680 663 Coils Coil 498 525 - -
Phac7g02680 663 SMART finulus 465 514 IPR011598 GO:0046983
Phac7g02680 663 MobiDBLite consensus disorder prediction 436 457 - -
Phac7g02680 663 MobiDBLite consensus disorder prediction 234 263 - -
Phac7g02680 663 MobiDBLite consensus disorder prediction 520 550 - -
Phac7g02680 663 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 9 191 IPR025610 -
Phac7g02680 663 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 459 508 IPR011598 GO:0046983
Phac7g02680 663 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 461 528 IPR036638 GO:0046983
Phac7g02680 663 MobiDBLite consensus disorder prediction 204 221 - -
Phac7g02680 663 PANTHER TRANSCRIPTION FACTOR TT8 7 659 - -
Phac7g02680 663 MobiDBLite consensus disorder prediction 533 549 - -
Phac7g02680 663 Coils Coil 231 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02680 Phac-Chr7 30558029 30572369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02680 301 660 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09820 37.534 1.95e-55 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac7g02680 bHLH-MYC_N 9.4e-53 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02680 - - gmx:100786815 1030.39