LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac7g01826	ATGGTGGGAGTGGTGATAACAGAGGAAGAAGACGACGTTGTGGTTGCTCCAACTAACTTTTCAATGGTGGAGGAGGGCATTTTTCGATCCAGTTTCCCTCGATCTTCAAATTTCTCTTTTCTAGAAACTCTGAATCTTCGTTCCGTCGTATATTTGTGCCCTGAACCCTATCCACAACAAAATTTACAGTTTCTTCAATCACAAAATATTCAGTTTTTCCACTTTGGTATTGAAGGCAAGACGGATCTTTCTATGCCTGTCGTTAAGGATTCGATCTTGGAGGCCGTCAAAGTTTTAATTGACGTGAGAAATCACCCAGTTCTAGTTCACTGTAATCAAGGAAAGCATCGAACTGGTTGCGTTGTTGGATGCTTCAGAAAATTGCAGAGTTGGTGTTTATCTTCTGTGTTTGAGGAGTACAAGCAATTTGCGGGTGCGAAATCAAGAACAACAGATTTAAGTTTCATAGAAACGGTTAATCTCTTGAGCCTGAGACAGTGTCTTAACAGTATCATATACCAATACCTAGGATATTCTTCGAAGAACCGCAAGTTGCTCTATAGAGATCATAATTCACTCAAGTTCCAGTTAACATCAGTTTAG	603	0.3997	MVGVVITEEEDDVVVAPTNFSMVEEGIFRSSFPRSSNFSFLETLNLRSVVYLCPEPYPQQNLQFLQSQNIQFFHFGIEGKTDLSMPVVKDSILEAVKVLIDVRNHPVLVHCNQGKHRTGCVVGCFRKLQSWCLSSVFEEYKQFAGAKSRTTDLSFIETVNLLSLRQCLNSIIYQYLGYSSKNRKLLYRDHNSLKFQLTSV*	201

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac7g01826	200	ProSitePatterns	Tyrosine specific protein phosphatases active site.	109	119	IPR016130	GO:0016311\|GO:0016791
	Phac7g01826	200	ProSiteProfiles	Dual specificity protein phosphatase domain profile.	19	174	IPR020422	GO:0006470\|GO:0008138
	Phac7g01826	200	PANTHER	TYROSINE-PROTEIN PHOSPHATASE	12	174	-	-
	Phac7g01826	200	SUPERFAMILY	(Phosphotyrosine protein) phosphatases II	15	155	IPR029021	-
	Phac7g01826	200	Gene3D	Protein tyrosine phosphatase superfamily	14	162	IPR029021	-
	Phac7g01826	200	Pfam	Tyrosine phosphatase family	14	160	IPR004861	-
	Phac7g01826	200	ProSiteProfiles	Tyrosine specific protein phosphatases domain profile.	90	122	IPR000387	GO:0016311\|GO:0016791
	Phac7g01826	200	FunFam	probable tyrosine-protein phosphatase At1g05000	13	163	-	-
	Phac7g01826	200	PRINTS	Plant and fungal dual specificity phosphatase signature	87	101	IPR020428	GO:0016791
	Phac7g01826	200	PRINTS	Plant and fungal dual specificity phosphatase signature	14	31	IPR020428	GO:0016791

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac7g01826	Phac-Chr7	15852720	15854376	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac7g01826	5	191	Protein tyrosine phosphatase (PTP) family	AT3G02800	62.632	8.26e-94	270

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac7g01826	K18045		-	gmx:100808199	333.183

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