Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00269 ATGAGTAGCGTGACTAGTGGGGGTGGTAATCGGAAGATATACAGAGGTTGTAGGTCATCATCATTAGATGAAGAAGGTGGAGTTGGAGGTAACATGGGAGGAGAAGTTCCTCTGAAGAAAGGTCCATGGACTGCAGCAGAGGATGCAATTTTGTTAGAATATGTTAATAAGCACGGACAAGGCAATTGGAATGCAGTCCAAAAGTATTCAGGACTTGCCCGTTGTGGGAAAAGCTGCCGTCTACGATGGGCAAATCACTTGAGACCGGATCTGAAAAAAGGTGCATTTACTGAAGAGGAAGAGAACCGAATCCTTGAGCTCCACGCAAAAATGGGGAACAAATGGGCTCGGATGGCTGCTGAGTTGCCTGGGCGTACGGATAATGAAATCAAGAACTACTGGAACACAAGAATCAAAAGAATGCAACGAGCCGGCTTACCTATCTACCCTCCAGAATTATGTGAGCGGATACTTAATGGAAATCAAGAAAGTCAAAATATTAGTCCCTTGACTGTTGAAGCCTCCCAGCACGATAATCTCTTGCAAACGGACCAATTTGATATACAGGATATGGATTTCAAGACTGTCAAATTTCATCATGGTCCATCACAGGTACCAGCAATTCTTGATATACCTGAAAACTTGTTTGAGCAATGTTCGGATTCATCTCATTTGTTCCCAACAATTTATCCTTCAAAACGTCTCCGGGAATCAGAAATTCTATACAATAGTTTTGGTAGTTGTACAGCTAATGCTTTTCAACTATTTGATCAGTATGGCAATTATATTGGTGAGAAAATTTATGACCATCCTCGGTTCTATCCTCCTCTTGAATCTGTTCTTAACACCAGTAATCAGTTTCATGGTGATAACATAAACGGCAGCCATGCCATGTTAAATGGCAATGTTTCTTCTTCTGTGCCCTTATTTGGGGCTAGGAAGTTGGAGCTCCCTTCACTCCAATATACAGAAACTCAACATGGTAGCTGGGTCACACATGGGTCCCCGCTACCTTCACTTGAGTCTGTAGATACATTGATTCAGTCTCCTCCAGGTGAGTCTATTCCATCAGATCTCATTTCTCCACAAAGCAGTGGTTTGCTGGAAGCAATAGTCTACAACTCGAAGAGCATGAAAGACTCGAATACTGATTTATTTTTTCCAGTCATAACCGGTGCATCCAATGAAGCAGCTGGGAGTTCAACCTTGAATCATCCCTATAAGACAGAATGGGATGAGCAAGGGGAGTCAAACTCCCCCTTAGGTCAATCTGCTGCTTCAGTTATGACTGACTATACTCCTATAAGCTCAGTAGATGGACCCCAATCAATCGAAACCACTCAAGATCATGATGATAAGCTTGAAGCACTCACCTGGTTCCCAAATAGTTCCAGGAAGAAAGAAAAATCGGAACAGATTGATTTTTCGCAACGTCCTGATGCTTTATTTGACTTAGCTTGGTTTGGAAGTAACACTGAATGTGGAATTAGTCAATCTGATCTAAAAGACGCTCTAAGTGCACTTCTTGGTGAAGATTACAACTCTAACTTTGGTGAAGATAGCAAGGGTAAGCAGTAG 1578 0.4227 MSSVTSGGGNRKIYRGCRSSSLDEEGGVGGNMGGEVPLKKGPWTAAEDAILLEYVNKHGQGNWNAVQKYSGLARCGKSCRLRWANHLRPDLKKGAFTEEEENRILELHAKMGNKWARMAAELPGRTDNEIKNYWNTRIKRMQRAGLPIYPPELCERILNGNQESQNISPLTVEASQHDNLLQTDQFDIQDMDFKTVKFHHGPSQVPAILDIPENLFEQCSDSSHLFPTIYPSKRLRESEILYNSFGSCTANAFQLFDQYGNYIGEKIYDHPRFYPPLESVLNTSNQFHGDNINGSHAMLNGNVSSSVPLFGARKLELPSLQYTETQHGSWVTHGSPLPSLESVDTLIQSPPGESIPSDLISPQSSGLLEAIVYNSKSMKDSNTDLFFPVITGASNEAAGSSTLNHPYKTEWDEQGESNSPLGQSAASVMTDYTPISSVDGPQSIETTQDHDDKLEALTWFPNSSRKKEKSEQIDFSQRPDALFDLAWFGSNTECGISQSDLKDALSALLGEDYNSNFGEDSKGKQ* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00269 525 MobiDBLite consensus disorder prediction 1 37 - -
Phac6g00269 525 SUPERFAMILY Homeodomain-like 37 134 IPR009057 -
Phac6g00269 525 ProSiteProfiles Myb-like domain profile. 35 87 IPR001005 -
Phac6g00269 525 FunFam Transcription factor MYB97 95 169 - -
Phac6g00269 525 CDD SANT 95 136 IPR001005 -
Phac6g00269 525 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 88 142 IPR017930 -
Phac6g00269 525 Gene3D - 95 169 - -
Phac6g00269 525 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 28 501 - -
Phac6g00269 525 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 35 87 IPR017930 -
Phac6g00269 525 MobiDBLite consensus disorder prediction 398 425 - -
Phac6g00269 525 Pfam Myb-like DNA-binding domain 93 136 IPR001005 -
Phac6g00269 525 Pfam Myb-like DNA-binding domain 40 87 IPR001005 -
Phac6g00269 525 CDD SANT 42 87 IPR001005 -
Phac6g00269 525 FunFam MYB-related transcription factor 39 92 - -
Phac6g00269 525 ProSiteProfiles Myb-like domain profile. 88 138 IPR001005 -
Phac6g00269 525 SMART sant 92 140 IPR001005 -
Phac6g00269 525 SMART sant 39 89 IPR001005 -
Phac6g00269 525 Gene3D - 39 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00269 Phac-Chr6 6184385 6190554 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00269 38 523 MYB Transcription Factor Family AT5G06100 40.119 1.45e-97 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac6g00269 Myb_DNA-binding 1.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00269 K09422 - gmx:100818609 728.013