Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02233 ATGGCTGCAACTCCTTCCAAATCCACATTCCGATCCCAATCCAATGCTAAATCCTCGCCCGCTGTAACCCCACACACTCCACAAACCCTACATCTGCGCCGATCCCCACGCGCCAAGTCCCTCCTCTTCGATTCTCCCAAATCTTCCAATTCACCTTGTGAAATCTTCCTTACAACTCCCAAGCGGAGAATTCAACGAATCAACGATTACATCGGACATGATTCTGGCAATGTCAGAGTCGCCGCTAAAGATTCAGCTAAGAAGAAAAGTGTTGTATCCAAGGAACAGAATAGGAAGAGCTCAATTGAATTTTCTCACGCTCCGGTGACGCCGGCTTCCTCGGAGAAGAGTTCAAAGAGGAAGAGGAAGGGTGAGAAGAGTGTGGTTACCAGAGCTAAAAGGGCAAAATTGGAAATTCCAAAACGGAGTTCAAAGTTGCCTGCGAGGCGCGTGTATTACAAAAAGGTTATTTTTGATGGAGAAGAGTTTGAAGTGGGGAATGATGTTTACGTCAAAAGGAGAGAAGATGCTACCTCCGATGATGAAGATCCCGAAGTTGAGCTGTGTAGGATGTGTTTCTTGACAAACAATGAGATCATGATTGAGTGTGACGATTGTTTGGGTGGGTTTCACTTGAAATGTTTGAGACCTCCATTGAAGGATGTTCCTGAAGGGGATTGGATATGTGGGTTCTGTGAGGGTCAGAGGATGGGTAAGGAGGTTCATCGTCCACAGCCTCCCGAGGGTAAGAAAGTGGTTAGATCTATGAGGGAGAAACTACTTTCCAGTGATTTGTGGGCTGCTCATATTGAAAGCATATGGAAAGAGGTAGACGGCAACTATTGGTGTCGGGTGAGGTGGTATACTATCCCGGAAGAGACTTCTGTTGGGAGGCAGCCCCATAACCTGAGAAGGGAGCTATACCGAACAAATGACTTTGCTGACATTGAGATGGAATCTGTCCTTAGACATTGCTATGTTATGGCCCCTAAAGAATATGCTAACGCTAACTATGAGGGAGATGATGTTTTCTTATGTGAATATGAGTATGACATCAATTGGCATAGTTTCAAACGTCTTGCTGATATTGACAATGAAAGAGAGAATGGTGAAGCGACTGACAGTGATGAAGACTGGTGCCTTGACAAGGAGTCAGACTCTGACACAGATGAAGATGTTGGATATGAAGAAGAAAATATTAAAGATGGACTATCTCAGCCATCAAAAGGCCACCACTTAGCTGCAAATCTTCACAAGGGACGGTTCTTCGGACTTCAGAAGATAGGCACAAAAAGAATTCCACAGCATGTAAGGTCTCACAAGCAGACTGATCTTGAGAGAGCAAAGTCTACACTGTTGTTAGCATCACTGCCTAAATCTTTACCATGTAGAAATAAAGAAATGGAGGAGATAACTACATTCGTCAAAGGTGCTATTTCTGATGATCAATGTCTGGGGGGTTGCCTCTACATTCATGGAGTTCCGGGAACTGGCAAGACAATGAGTGTACTATCAGTAATGAGGAGTTTGAAGTCAGAAGTTGATGCAGGAAACATCAAACCATACACCTTTGTGGAGATTAATGGTTTGAAGTTGGCATCACCAGAGAATATTTATCGGGTCATATACGAGGCACTTAATGGACACAGGGTCAGCTGGAAAAAGGCTCTCCACTTGTTGAATGAGCGATTTGTAGAAGGGAAGAAAATCAGAGATGAGGCTGACCGACCATGTATTTTGCTTATTGATGAACTCGATCTTCTTGTAACCAGAAACCAATCGGTTCTGTATAATATTCTTGACTGGCCTACTAAGCCACATTCCAAACTAATAGTCATAGGGATAGCAAATACTATGGATCTTCCAGAGAAGTTACTTCCTCGCATATCAAGCCGAATGGGAATTCAGAGGCTTTGCTTTGGCCCATATAATTATCACCAGCTTCAAGAAATCATTTCAAGTCGCCTCAAGGGAATTGATGTTTTTGAAAAGCAAGCTGTAGAATTTGCTTCAAGAAAGGTTGCAGCAATCTCGGGAGATGCACGTCGTGCTTTGGAGATATGCAGACGTGCAGCTGAAATTGCAGATTATCGAATGAAGAAGTTAATTCCTAATCCTGATCTCGTTACTGCAGGAAAGGGACTTGTTGGAATGGCAGATGTTGAAGCAGCCATTCAAGAAATGTTCCAAGCACCTCATATTCAAATGATGAAAAGCTGTTCCAGATTAAGCAAAATTTTCCTGACAGCTATGGTACACGAGCTTTATAATACTGGAATGGGAGAAACTACTTTTGAAAAGTTGGCAATGAGGGTTTCATGCCTATGTATCAGCAATGGAGAAGTTTTTCCGGGATATGATACTCTGCTGCAAGTTGGCTGTAAGCTAGGTGAATGCAGAATTATTTTATGTGAAGCAGGTTCCAAGCACAAGTTGCAAAAATTGCAGCTTAATTTCCCTAGTGATGATGTGACCTTTGCGCTGAGAGACTGCAAAGATCTACCTTGGCTGTCAAAGTATCTAATGTAG 2529 0.4306 MAATPSKSTFRSQSNAKSSPAVTPHTPQTLHLRRSPRAKSLLFDSPKSSNSPCEIFLTTPKRRIQRINDYIGHDSGNVRVAAKDSAKKKSVVSKEQNRKSSIEFSHAPVTPASSEKSSKRKRKGEKSVVTRAKRAKLEIPKRSSKLPARRVYYKKVIFDGEEFEVGNDVYVKRREDATSDDEDPEVELCRMCFLTNNEIMIECDDCLGGFHLKCLRPPLKDVPEGDWICGFCEGQRMGKEVHRPQPPEGKKVVRSMREKLLSSDLWAAHIESIWKEVDGNYWCRVRWYTIPEETSVGRQPHNLRRELYRTNDFADIEMESVLRHCYVMAPKEYANANYEGDDVFLCEYEYDINWHSFKRLADIDNERENGEATDSDEDWCLDKESDSDTDEDVGYEEENIKDGLSQPSKGHHLAANLHKGRFFGLQKIGTKRIPQHVRSHKQTDLERAKSTLLLASLPKSLPCRNKEMEEITTFVKGAISDDQCLGGCLYIHGVPGTGKTMSVLSVMRSLKSEVDAGNIKPYTFVEINGLKLASPENIYRVIYEALNGHRVSWKKALHLLNERFVEGKKIRDEADRPCILLIDELDLLVTRNQSVLYNILDWPTKPHSKLIVIGIANTMDLPEKLLPRISSRMGIQRLCFGPYNYHQLQEIISSRLKGIDVFEKQAVEFASRKVAAISGDARRALEICRRAAEIADYRMKKLIPNPDLVTAGKGLVGMADVEAAIQEMFQAPHIQMMKSCSRLSKIFLTAMVHELYNTGMGETTFEKLAMRVSCLCISNGEVFPGYDTLLQVGCKLGECRIILCEAGSKHKLQKLQLNFPSDDVTFALRDCKDLPWLSKYLM* 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02233 842 MobiDBLite consensus disorder prediction 368 392 - -
Phac5g02233 842 MobiDBLite consensus disorder prediction 1 54 - -
Phac5g02233 842 Pfam AAA lid domain 663 696 IPR041083 -
Phac5g02233 842 SUPERFAMILY FYVE/PHD zinc finger 176 237 IPR011011 -
Phac5g02233 842 Pfam PHD-finger 189 233 IPR019787 -
Phac5g02233 842 SMART PHD_3 188 233 IPR001965 -
Phac5g02233 842 SMART AAA_5 485 639 IPR003593 GO:0016887
Phac5g02233 842 FunFam Origin recognition complex subunit 1 638 730 - -
Phac5g02233 842 Pfam ATPase family associated with various cellular activities (AAA) 490 635 IPR003959 GO:0005524|GO:0016887
Phac5g02233 842 ProSiteProfiles Zinc finger PHD-type profile. 186 235 IPR019787 -
Phac5g02233 842 MobiDBLite consensus disorder prediction 369 392 - -
Phac5g02233 842 Gene3D - 126 381 IPR043151 -
Phac5g02233 842 FunFam Origin recognition complex subunit 1 442 641 - -
Phac5g02233 842 FunFam Origin recognition complex subunit 1 184 251 - -
Phac5g02233 842 Pfam BAH domain 269 359 IPR001025 GO:0003682
Phac5g02233 842 Gene3D - 441 637 IPR027417 -
Phac5g02233 842 MobiDBLite consensus disorder prediction 81 131 - -
Phac5g02233 842 Gene3D - 638 724 - -
Phac5g02233 842 ProSitePatterns Zinc finger PHD-type signature. 189 232 IPR019786 -
Phac5g02233 842 SMART BAH_4 220 361 IPR001025 GO:0003682
Phac5g02233 842 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 176 254 IPR013083 -
Phac5g02233 842 MobiDBLite consensus disorder prediction 81 101 - -
Phac5g02233 842 ProSiteProfiles BAH domain profile. 244 361 IPR001025 GO:0003682
Phac5g02233 842 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 455 703 IPR027417 -
Phac5g02233 842 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 293 836 - -
Phac5g02233 842 FunFam Origin recognition complex subunit 1 252 444 - -
Phac5g02233 842 MobiDBLite consensus disorder prediction 1 30 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02233 4 841 Core DNA Replication Machinery Family AT4G14700 61.321 0.0 1008
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Phac5g02233 AAA 2.8e-20 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02233 K02603 - gmx:100798547 1444.1