LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac3g00853	ATGTATACACTCTTCAACATTCTTCTTTTCTTTCTCACATTTTCTTCTTCTTCTTCTTCATCTTCTCCTTCTTCACACCCTCGCCGTGTCCTTCACCAACCACTCTTCCCCAGAATCTCTTTCCCTCCAACACAACCTCCAGCTTTATCCCCTCAACCCCAAAAGCAAAACCATTTACCCAAGTTTCCATTTTCATCTTCTTCATCCTCGTCGCCGCCACCGCCGCAAAAATCTTTCTTTCCTTCTTACCATTCCCCTCCACTCCCTCCTTCTCCCACCGTCGTTGCCACTTTTCCCGCTAACATCTCCTCCCTCCTACTCCCCCACCCCTACACCCACCACCACCGCTCTGCCGCCGCCCTCGCCGTCTCCCTCTCCCTCTTCTCCCTCGCCCTCCTCGCCGCCGCCGCCTTCGTCCTCCTCCACCGCCGCCGCGCTCACAGGGCTTCCTCCTCCGACGCCACCCATGACGACGACGACGACAAAGCCTCGAGATCCGACAGCCTCCGCCTGTTCCCGCCGAATGCCGCCGCCTCCGACGGCGCCGATAGAAAACCCCGCGGAAAGTCCTCCCCGACGTCGGAGCTACTCTACCTCGGCACGGTAGCGAACTCAGTGAACTCAACACTTGACACAAGCTCCAGCCACCACCACGATGGTTTCCGGCCTCCGTATCAAAAACTCGGCGACTCGCCGGAACTGAAGCCACTTCCTCCTTTGCCACGTCACAAATTCAAACAGTGGATGAATGAAGATGAAGATGATAAAAATGTGAAAGAAAATGTGGAACAACAAGAAGATGTAGAAGAAGAAGATGATGAAGAGCAGTTTTTTTCTCCAAGAGGTTCTTCTGATGGGAACAAACAGCATAGTCCTCCTTCTCCTTCTGCCGTTGCTGCTTCAAGTTCCCGCGTGTTCCACGTGGATAATAAATTCGGTTCTACAAGCTTCACTTCTCGAACCCCTTCGTACCATCGTTCCAATTCCCTCTCTTTCTCTCGTTCCCCGTCTCTTAATTTCAGCCCCGCGAGTGTTAAATCACTGCCTCCAAACAACCCTGTTTCCCCTCCTTTCTCTTCATCATCTTCTTCTCCCAGGGAACAATGGCGTGTTCCTTCAAGGGACACAAATTCTCCGGCGAGAAATTTACCTCCTCCACCTCCGCCGCCACCTCCGAGGCGGATTTGGGAGGCTCCGGTTTCTGTTAGGAAAGAGAGTGAGGAGAATCTGAAGCCAAAGTTGAAAGCTTTACATTGGGATAAAGTTAAGGCCAGCTCGGACAGGGTCATGGTTTGGGATCAGTTGAGACCCAGTTCTTTTCAGTTGAACGAGGACATGATTGAAACGCTTTTTGTGGTAAATAATTCCAAGGAGGGTTTCGGGGTTGCGATTAGAGATAATGGTCGGCGCAACATAGTTCATTCTGCTTCTCCCATGCCCCTGGAGAATAGGGTTCTTGACCCTAAGAAGTCTCAGAACATTGCCATTTTGCTTAGGGCTCTCAACGTTACTATTGACGAAGTTTGCGATGCCCTCAGAGAAGGCAATTGTGATACGTTGGGAACAGAACTTCTTGAAAGTTTATTGAAGATGGCTCCAACTAAAGATGAAGAATCTAAGCTGAAGGGATTTCAAGATGAATCGCCCTCCAAGCTTGGCCCAGCTGAGAAATTTCTCAAAGCTGTTCTTGATATACCTTTCGCTTTTAAGAGAGTGGATGCTATGCTCTACATTGCTAATTTTGATTCAGAATTAGAATACCTTAAAAAGTCCTTTGAAACTCTGGAGGTGGCCTGTGAGGAATTAAGGAATAGTCGATTGTTTTTGAAGATACTTGAAGCAGTGTTAAGAACAGGAAATAGAATGAATGTTGGCACCAATCGTGGTGATGCTCATGCGTTCAAACTGGACACACTTTTGAAGTTAGTTGATATTAAAGGAACTGATGGAAAGACTTCTCTGTTGCATTTTGTTGTACAGGAAATTGTCAGAACGGAGGGTTCTCATATTTCTGGCTCTAACCATCACCATGCATCTGACAATGTCCACCAATACACTCTCCAAGATGAGGTTGACTTTAAAAAGCTTGGCCTGCAAATTGTTTCGGGACTGAGTGGGGAGCTCACCAATGTTAAAAAAGCTGCTGCTATGGATTCAGACGTGCTCAGTAGTGATGTTGCTAAACTTGCCAGAGGAATCGAAAAAGTTGTGCAAGTAGTGAAATTGAATGAGGAGTCACCTTTGAAAGAAACTAACCAAAAGTTTTCGGAGGCAATGAAAGGTTTCTTGGAAAGGGGAAAGCAAGAGATTTCAACAATCCAGGCCCAAGAGAAAAATGGCCTCTCTTCAGTGAAGGAGATAACTGAGTATTTTCATGGAAATTCAGCAAAGGAAGAAGCTCATCCATTTAGAATTTTTATGGTTGTGAGGGATTTCCTTTCTATTCTTGATGGTGTTTGCAAGGAAGTTGGTAAAGTGAATGAGAGAACCTTGGTTGGTTCCCGTCATTCTGTAATGCCTGCAAATCCTATAATGCAAACCTTTTTTCCTGAGATTATTGGTAAGCAACTATCCGATTCCTCTGAATCTGATTAA	2595	0.4678	MYTLFNILLFFLTFSSSSSSSSPSSHPRRVLHQPLFPRISFPPTQPPALSPQPQKQNHLPKFPFSSSSSSSPPPPQKSFFPSYHSPPLPPSPTVVATFPANISSLLLPHPYTHHHRSAAALAVSLSLFSLALLAAAAFVLLHRRRAHRASSSDATHDDDDDKASRSDSLRLFPPNAAASDGADRKPRGKSSPTSELLYLGTVANSVNSTLDTSSSHHHDGFRPPYQKLGDSPELKPLPPLPRHKFKQWMNEDEDDKNVKENVEQQEDVEEEDDEEQFFSPRGSSDGNKQHSPPSPSAVAASSSRVFHVDNKFGSTSFTSRTPSYHRSNSLSFSRSPSLNFSPASVKSLPPNNPVSPPFSSSSSSPREQWRVPSRDTNSPARNLPPPPPPPPPRRIWEAPVSVRKESEENLKPKLKALHWDKVKASSDRVMVWDQLRPSSFQLNEDMIETLFVVNNSKEGFGVAIRDNGRRNIVHSASPMPLENRVLDPKKSQNIAILLRALNVTIDEVCDALREGNCDTLGTELLESLLKMAPTKDEESKLKGFQDESPSKLGPAEKFLKAVLDIPFAFKRVDAMLYIANFDSELEYLKKSFETLEVACEELRNSRLFLKILEAVLRTGNRMNVGTNRGDAHAFKLDTLLKLVDIKGTDGKTSLLHFVVQEIVRTEGSHISGSNHHHASDNVHQYTLQDEVDFKKLGLQIVSGLSGELTNVKKAAAMDSDVLSSDVAKLARGIEKVVQVVKLNEESPLKETNQKFSEAMKGFLERGKQEISTIQAQEKNGLSSVKEITEYFHGNSAKEEAHPFRIFMVVRDFLSILDGVCKEVGKVNERTLVGSRHSVMPANPIMQTFFPEIIGKQLSDSSESD*	865

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac3g00853	864	MobiDBLite	consensus disorder prediction	51	66	-	-
	Phac3g00853	864	Pfam	Formin Homology 2 Domain	406	816	IPR015425	-
	Phac3g00853	864	SMART	it6_source	404	831	IPR015425	-
	Phac3g00853	864	MobiDBLite	consensus disorder prediction	237	263	-	-
	Phac3g00853	864	MobiDBLite	consensus disorder prediction	147	167	-	-
	Phac3g00853	864	SUPERFAMILY	Formin homology 2 domain (FH2 domain)	384	829	-	-
	Phac3g00853	864	MobiDBLite	consensus disorder prediction	67	84	-	-
	Phac3g00853	864	ProSiteProfiles	Formin homology-2 (FH2) domain profile.	404	842	IPR015425	-
	Phac3g00853	864	MobiDBLite	consensus disorder prediction	37	84	-	-
	Phac3g00853	864	MobiDBLite	consensus disorder prediction	357	378	-	-
	Phac3g00853	864	MobiDBLite	consensus disorder prediction	280	348	-	-
	Phac3g00853	864	MobiDBLite	consensus disorder prediction	209	396	-	-
	Phac3g00853	864	Gene3D	Formin, FH2 domain	413	838	IPR042201	-
	Phac3g00853	864	MobiDBLite	consensus disorder prediction	379	396	-	-
	Phac3g00853	864	PANTHER	FORMIN-RELATED	10	850	IPR027643	GO:0003779\|GO:0030036\|GO:0045010\|GO:0051015
	Phac3g00853	864	MobiDBLite	consensus disorder prediction	147	195	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac3g00853	Phac-Chr3	7516159	7520309	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac3g00853	17	853	FH2 protein (formin) Gene Family	AT2G43800	46.638	0.0	608

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac3g00853	-		-	vun:114175163	1303.89