Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9809g00003 ATGGAGTTTGGTTTCTTCAGAGGCTTACCTCAAAACATATTCCTGTTGGACATAGCAGGGCAATTAGCTTTCCTGGTGGATTGCGTGGTTCAGTTCTTCGTGGGATATCACGACGTCCATTCTAACAGTCTATCCCTTGTACTTGACCAGTCCCTTATAGCCCTTAGGTACCTCAAGTCTCGCTTCCTCCTTGACCTCCTCTCTTGTCTACCCTGGGACTACATTTACAAACTCTCTCACAACAATGAACTCTTTCGCTATCTCCTTTGGATCAGACTCACCCGTGCTCTTCGTGTCACCGACTTCTTCCACTCCCTCGAGAAGAACACTCGCGTCAATTACTTGTTTGCCAGAATCCTCAAACTCTTTGTTGTTGAACTTTACTGCACCCACACCGCTGCCTGCATTTTCTACTATCTCGCTACCACCCTTCCCCCTTCCCAGGAGTCTTACACTTGGATCGGTAGCTTGAAGTTGGGTGACTATGCCTATTCCGATTTCAGACACGTTGATCTCTTCAAGCGTTACGTCACTTCCCTCTACTTCGCTATTGTTACCATGGCCACTCTCGGTTACGGTGACATCCACGCCGTCAATGTCAGGGAAATGATTTTTGTCATGATTTATGTCTCCTTTGACATGATTCTTGGCGCTTACCTTCTTGGTAACATCACTGCCTTGATTGTCAAAGGCTCTAAGACTGAAAGATTCAGAGATAAAATGTCTGATATTATTAAGTACGTCAATAAGAACAACTTGGACACCCAGATATGTCACCACGTTAAAGATCATTTGCGCTTAAAGTATGATCGCACCTACACCTGCTCTTCCGTTCTTCAGGACATTCCATCCACCATCCGCACTAAGATTTTAATCAGTTTATATGAGCAGTTCATTCAGAAAGTTTCTCTTTTCAAGGGATGCTCTTCAGGGAACAGCAATAAAACTCGGCCTGTTATGAAAAGATACAAGGCAAAGATGGACAATAGAATGAGAAAGAATTCTGATAATTACTTACGTACGTGGACCTTTACAACTTATATACAAGTGGGGGCAACCAAAGTCCATGAAGAGTTTTTCCTCCCCGGAGAATTGGTTATGGAGCAAGGAGATGTTGCAGACCAACTCTACTTTGTATATCATGGTGAGCTGCATGAGATAAGGAGGGAAGATGGTGACACAGAAGAGACAATCACATTGCATACCTATAGTCCCTTCGGTCAGGTTTCTTTTTTTTGCAACATGCCTCAAACTTCCACGGTTGAAGCTCGTGAATTTTGCAAGGTTCTGCGACTTGATAAGAAATCCTTCACTGAAATACTAAAGATATACTTTTTAGATGGCCGTATTGTCTTGAACAATCTCCTTGAGGTTAGAGACTCGAGTCTCCAGCGTAAGCTTTTGGTATCAGACTTCAACCTGACTATTGGAAACCTGGAAACAGAGCTGGCTACGAGGATGAACTGTGCTGCCCATGATGGTCACCTTGACCTTGTGAAACGTTTGATTAGCTTTGGAGCAGATCCTAATAAGACTGATTATGATGGCAGAACACCCTTGCATATCTCAGCATCAAAAGGATATGTAGATATTTCTTCCTTTCTTGTTGAACAACGAGTAAATATCAATTCGACAGATAAATTTGGCACCACTCCCTTGCTTGAAGCTATCAAGAATGGACATGAAGAAGTAGCATCTATACTTATTAATGCGGGAGCTATCCTTACTATTGATGATGTTGGCAATTTTCTCTGCATGACTGTTGCAAAGAAGGAACTGAACCTTTTAAAAAGGGTTCTGGCTTGTGGAATTAATCCAAATGCCAAAAATTATGATCAACGTACGCCTCTTCACATAGCTGCCTCTGAAGGTTTGTGTACAATGGCTGAATTACTTCTAGAAGCAGGAGCAAGTGTTTTATCTAAGGACAGATGGGGAAATACACCTATTCATGAAGCTCATACCGGTGGAAATAGACATATGATAAAAATGCTTGAAGTTGCAAAAGTTTCTCAGTTGGCTGAGTTGTCCAATAGTATTCACGAAACTCAAGCAACATCAATGTTGCAGTCAACAGATGGAATTCCCAGAAAGAGATGTATAGTATTTCCTTTCCACCCATGGGATCACAAAGAGGATAGAGAAGAGGGAGTGGTCCTATGGGTTCCACAAAGCATTGAAGAACTTATAAAGGAGGCAATGAAATATTTGGAAATTCCAAAGGGTTCCTGTATTTTATCAGAACAAGGTGGCAAAATTGTTTATGTAGACATGATTAACAATGATGAGAAGCTATTTCTGGTGAGTGAAGCACAGAATGAAGTGAAATGTTCTGGTCATCCTACCCCAAGTGTCCAGGCACAGCAGTAG 2370 0.4203 MEFGFFRGLPQNIFLLDIAGQLAFLVDCVVQFFVGYHDVHSNSLSLVLDQSLIALRYLKSRFLLDLLSCLPWDYIYKLSHNNELFRYLLWIRLTRALRVTDFFHSLEKNTRVNYLFARILKLFVVELYCTHTAACIFYYLATTLPPSQESYTWIGSLKLGDYAYSDFRHVDLFKRYVTSLYFAIVTMATLGYGDIHAVNVREMIFVMIYVSFDMILGAYLLGNITALIVKGSKTERFRDKMSDIIKYVNKNNLDTQICHHVKDHLRLKYDRTYTCSSVLQDIPSTIRTKILISLYEQFIQKVSLFKGCSSGNSNKTRPVMKRYKAKMDNRMRKNSDNYLRTWTFTTYIQVGATKVHEEFFLPGELVMEQGDVADQLYFVYHGELHEIRREDGDTEETITLHTYSPFGQVSFFCNMPQTSTVEAREFCKVLRLDKKSFTEILKIYFLDGRIVLNNLLEVRDSSLQRKLLVSDFNLTIGNLETELATRMNCAAHDGHLDLVKRLISFGADPNKTDYDGRTPLHISASKGYVDISSFLVEQRVNINSTDKFGTTPLLEAIKNGHEEVASILINAGAILTIDDVGNFLCMTVAKKELNLLKRVLACGINPNAKNYDQRTPLHIAASEGLCTMAELLLEAGASVLSKDRWGNTPIHEAHTGGNRHMIKMLEVAKVSQLAELSNSIHETQATSMLQSTDGIPRKRCIVFPFHPWDHKEDREEGVVLWVPQSIEELIKEAMKYLEIPKGSCILSEQGGKIVYVDMINNDEKLFLVSEAQNEVKCSGHPTPSVQAQQ 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9809g00003 789 Gene3D - 579 693 IPR036770 -
Mupr9809g00003 789 Pfam KHA, dimerisation domain of potassium ion channel 698 767 IPR021789 -
Mupr9809g00003 789 ProSiteProfiles KHA domain profile. 699 785 IPR021789 -
Mupr9809g00003 789 SMART ANK_2a 645 674 IPR002110 GO:0005515
Mupr9809g00003 789 SMART ANK_2a 482 511 IPR002110 GO:0005515
Mupr9809g00003 789 SMART ANK_2a 548 577 IPR002110 GO:0005515
Mupr9809g00003 789 SMART ANK_2a 612 641 IPR002110 GO:0005515
Mupr9809g00003 789 SMART ANK_2a 515 544 IPR002110 GO:0005515
Mupr9809g00003 789 PRINTS EAG/ELK/ERG potassium channel family signature 17 27 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mupr9809g00003 789 PRINTS EAG/ELK/ERG potassium channel family signature 128 138 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mupr9809g00003 789 PRINTS EAG/ELK/ERG potassium channel family signature 220 229 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mupr9809g00003 789 PRINTS EAG/ELK/ERG potassium channel family signature 176 193 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mupr9809g00003 789 ProSiteProfiles Ankyrin repeat profile. 612 644 IPR002110 GO:0005515
Mupr9809g00003 789 Gene3D Jelly Rolls 275 468 IPR014710 -
Mupr9809g00003 789 Gene3D - 3 230 - -
Mupr9809g00003 789 PRINTS Ankyrin repeat signature 628 642 IPR002110 GO:0005515
Mupr9809g00003 789 PRINTS Ankyrin repeat signature 516 531 IPR002110 GO:0005515
Mupr9809g00003 789 SUPERFAMILY Voltage-gated potassium channels 8 229 - -
Mupr9809g00003 789 SUPERFAMILY cAMP-binding domain-like 232 324 IPR018490 -
Mupr9809g00003 789 CDD CAP_ED 352 452 IPR000595 -
Mupr9809g00003 789 SMART cnmp_10 338 456 IPR000595 -
Mupr9809g00003 789 Pfam Ion transport protein 14 228 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mupr9809g00003 789 Gene3D - 478 578 IPR036770 -
Mupr9809g00003 789 Pfam Ankyrin repeats (3 copies) 488 577 IPR002110 GO:0005515
Mupr9809g00003 789 ProSiteProfiles Ankyrin repeat region circular profile. 548 579 - -
Mupr9809g00003 789 SUPERFAMILY cAMP-binding domain-like 352 456 IPR018490 -
Mupr9809g00003 789 ProSiteProfiles Ankyrin repeat profile. 548 580 IPR002110 GO:0005515
Mupr9809g00003 789 ProSiteProfiles Ankyrin repeat region circular profile. 612 644 - -
Mupr9809g00003 789 ProSiteProfiles Ankyrin repeat profile. 515 547 IPR002110 GO:0005515
Mupr9809g00003 789 ProSiteProfiles cAMP/cGMP binding motif profile. 355 441 IPR000595 -
Mupr9809g00003 789 Pfam Ankyrin repeats (many copies) 600 653 IPR002110 GO:0005515
Mupr9809g00003 789 SUPERFAMILY Ankyrin repeat 444 665 IPR036770 -
Mupr9809g00003 789 Pfam Cyclic nucleotide-binding domain 359 442 IPR000595 -
Mupr9809g00003 789 ProSiteProfiles Ankyrin repeat region circular profile. 515 547 - -
Mupr9809g00003 789 ProSiteProfiles Ankyrin repeat profile. 482 514 IPR002110 GO:0005515
Mupr9809g00003 789 PANTHER POTASSIUM CHANNEL AKT1 1 771 IPR045319 GO:0005249|GO:0006813
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9809g00003 Mupr-Chr9809 13910 19192 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9809g00003 1 644 Ion Channels AT5G37500 54.273 0.0 724
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9809g00003 K21867 - gmx:100798698 1236.48