Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5346g00003 ATGGAGGAGACACATAAGAGGGTGCAAGACAAAGAGAAAGGAGGAGAAGAAGTGAGGTACCGTGGTGTGAGAAGGAGGCCATGGGGTAAGTGTGGGGCAGAGATTAGAGACCCAACAAAACCTACGGGAAGACAATGGTTGGGGACATTTGACACAGCAGAAGAAGCTGCCAGAGCTTATGATCGTGCAGCCATTGCTCTGAGGGGTGCTCTTGCAATCCTTAATTTCCCTGATGAGTACTATTCTCATCTCCCTTTTGTATTGTCAAATTCTTCTACTATGGGTGGTGGAAGTTCTTTTGCTGCATCACAGAAGGAAGTTATTGAGTTTCAGTGTTTGGATAACAAGGTGTTGGAAGAACTTCTTGAGTCGGAAGAGAACAAATGGAACCAAGACTAA 399 0.4536 MEETHKRVQDKEKGGEEVRYRGVRRRPWGKCGAEIRDPTKPTGRQWLGTFDTAEEAARAYDRAAIALRGALAILNFPDEYYSHLPFVLSNSSTMGGGSSFAASQKEVIEFQCLDNKVLEELLESEENKWNQD 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5346g00003 132 MobiDBLite consensus disorder prediction 1 21 - -
Mupr5346g00003 132 SMART rav1_2 19 83 IPR001471 GO:0003700|GO:0006355
Mupr5346g00003 132 FunFam Ethylene-responsive transcription factor 2 18 78 - -
Mupr5346g00003 132 Gene3D AP2/ERF domain 18 78 IPR036955 GO:0003700|GO:0006355
Mupr5346g00003 132 Pfam AP2 domain 19 69 IPR001471 GO:0003700|GO:0006355
Mupr5346g00003 132 ProSiteProfiles AP2/ERF domain profile. 19 77 IPR001471 GO:0003700|GO:0006355
Mupr5346g00003 132 PRINTS Ethylene responsive element binding protein signature 20 31 IPR001471 GO:0003700|GO:0006355
Mupr5346g00003 132 PRINTS Ethylene responsive element binding protein signature 43 59 IPR001471 GO:0003700|GO:0006355
Mupr5346g00003 132 PANTHER DNA-BINDING DOMAIN 8 120 IPR044808 GO:0003700|GO:0009873
Mupr5346g00003 132 SUPERFAMILY DNA-binding domain 19 79 IPR016177 GO:0003677
Mupr5346g00003 132 CDD AP2 19 78 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5346g00003 Mupr-Chr5346 31026 31424 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5346g00003 16 128 AP2-EREBP Transcription Factor Family AT3G23230 60.163 5.31e-41 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr5346g00003 AP2 3.6e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5346g00003 - - gmx:100796977 194.512