Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2635g00001 ATGGATCCTTTTGGGGAGTATTTTTGGAATTTTCTCTCTAAGCTTTTGAATACTCTGTTCTGGGTGTTCACCAAGGTCTTCCTTAGATTCTATAGTTCTGATTTTTCTGAAGCAATGAAACAACTTTGTTCCTCTCAGTTTTCATGTGACAATGGGCAAGCTGGGTCAATTCGTTCCGAGACTGAAAATTTTGAGGCAGTAACTGATACTATCTCACATGAAAGTGATCAAATTGATTCCAATGGTTGCAAGCAAGAATCAGAGTCCACGGAAAATTGTTGTTCTGAAACTGTCCGTGATGGTGGGAATTTTGCGCTCGAAGAAGAGGAAACGACAAAGTTGGTTTTCAAATTTGAATATCAGAGTTGGAATTGCAACCATGGGGAAGAATTCGAAGGAGGGTGTGGTGAAAGTGGTGATTTTGTGAATGGAGGTGATGCTGTTTCTGCTAGCACCAATAAGTATGAGTTCATGTCAGGCAAGAGTTTCAGCCACTTCTTGGGTGAACCTGAGGCTGAAAGTTTCACAGTCAAAGAATGTTTTGTTCATTCAAATGATGCTTTTCAATTGAAAAATCATGTTAACAATGATTTTGGGTTCTTGGCAAGGAGGAAATTCATGCCAGAAAATTGTAAAAGAGGGGTTGATGCAGAAAATCTTGATAATTTCACAGAAAGGAAGCTCAAAGCTGAGGAATCAATGGAACAATCTGTGGAGACAGTTGTTCGCAATTTTCTTTCTGAGGATGATTTTATTTGTTCAAGTTCTGACTCAGATTCTATTAGTACTTTGGGGGAGGGGTTTTTATCTGACACGGACTTTGGAACCTCTATAGAGTTTGACACGTTGGGAAGCAATGCAGAGGAAAATGTAGGGCTAACAGAAGAAAATTTGGAGTTTGGGGATGAGAATTTGGATGTTGGCTATGAACCTGATGATTTTGCTGAAGAGGACGAAGATATAATGGACGAGCTTGAAAAATTGGAAAAAGAATGTAGGCTAGAGAAGTCATCAGGTAAAAGTAGCATCAGTTCCAAACCTGAACAATCTGTGAAACCTAATTCACAGACTTTAGCAACTTTTGATCTTGAGGAATCCAACCGGTTTGACACACTGTGGGAACATCAAGATTTGATAGAACAGTTGAAGATGGAATTGAAGAAGGTCAGAGCCACTGGCCTACCTACTATCCTTGAGGATTCTGAGTCTCCAAGGATAATGGAAGACTTGAAGCCATGGAAAATTGATGAAAAATTACAGCATGGTAGCACCATAAATGAGCTTCCAAAATTCTACAGGAGTTATAGAGAACGAATGCGAAAATTCGATATCTTGAATTACCAAAAGATGTATGCCATAGGTGTTTTGCAGTCAAAGGACCCACTCCAATCATTTTCAACCCATAAGAACCCTTCACCAGCATTCACACACATTCTTCCACGCGGCTTTCGCCTTTCTAGACGCAAACACACCGAATCTGACCCAATGAAGAAGTTCACAAGAGAATTATACAGAGATTTGGAAATGGTTTATGTGGGGCAGTTGTGCCTTTCTTGGGAATTCCTTCAGTGGGAATATGAGAAGGCCTTGAAGCTATGGGAATCTGACCAATACGGGTTACTAAGGTTCAATGAAGTGGCAGGGGAGTTCCAACAATTCCAAGTGCTTCTCCAAAGGTTCATAGAGAATGAACCTTTCCAAGGTCCACGCGTTGAAAACTATGCCAGGAATCGTTGTGCCATGCGCAATCTTCTTCAGGTTCCAGTAATAAGAGAAGACAACGCCAAGGATAAAAGGAAATTCAGAAAAAGAGAGGCAGATAAAGATGCAGTCACAAGTGACAGGCTAGTGGAGATTTTGGAAGAATCCATCAGAACAATTTGGCGTTTTATAAGAGCTGATAAAGATGCATCTAGCTTGGGACTTAAAGGTCTAAGGGAAAATCAAGTAGAGCTGCAAGACCCTTCAGATTCAGAGCTTTTCGTGGAGATTAGAACGGATCTTCAAAAGAAGGAAAAGAGATTGAGAGAGCTTTTGAGGAGTGGAAGCTGCATATTGAAGAGGTTTCAAAAGCATCATGAAGATGAAGGGGATCAAGTTCTTTATTTTTTCTCTCAAGTGGATATGAAATTGGTTTGGAGAGTGTTAAACATGTCAAGGATAACGACGGATCAACTAGCATGGTGTCGCAGTAAACTAAATAAGATCAATTTTGTAAACCGAAGGATACATGTAGAGCCTTCATTCTTACTTTTTCCTAGTTTTACTCCATTAACAAAGATGGTGCAGAGGCTTACTTACCGCACTCGACACAGCTATGCTACCAAATCGAACCAACACCGGGTTGTTAAGACCCCTGGTGGGAAGTTGGTGTACCAGGGCACTAAAAAGAGAGCAAGCGGACCCAAGTGCCCTGTCACTGGGAAGAGGATCCAAGGGATCCCACACTTGAGACCCACTGAATACAAGAGGTCTAGATTGCCTAGGAACCGCAGGACAGTAAACCGGGCATATGGAGGTGTATTATCTGGAGGAGCTGTTAGAGAAAGGATTATCCGTGCTTTCCTTGTTGAAGAGCAAAAAATTGTGAAAAAGGTATTGAAGATCCAGAAGACAAAAGAAAAGCAGGCATCGAAGAGCTAA 2643 0.4109 MDPFGEYFWNFLSKLLNTLFWVFTKVFLRFYSSDFSEAMKQLCSSQFSCDNGQAGSIRSETENFEAVTDTISHESDQIDSNGCKQESESTENCCSETVRDGGNFALEEEETTKLVFKFEYQSWNCNHGEEFEGGCGESGDFVNGGDAVSASTNKYEFMSGKSFSHFLGEPEAESFTVKECFVHSNDAFQLKNHVNNDFGFLARRKFMPENCKRGVDAENLDNFTERKLKAEESMEQSVETVVRNFLSEDDFICSSSDSDSISTLGEGFLSDTDFGTSIEFDTLGSNAEENVGLTEENLEFGDENLDVGYEPDDFAEEDEDIMDELEKLEKECRLEKSSGKSSISSKPEQSVKPNSQTLATFDLEESNRFDTLWEHQDLIEQLKMELKKVRATGLPTILEDSESPRIMEDLKPWKIDEKLQHGSTINELPKFYRSYRERMRKFDILNYQKMYAIGVLQSKDPLQSFSTHKNPSPAFTHILPRGFRLSRRKHTESDPMKKFTRELYRDLEMVYVGQLCLSWEFLQWEYEKALKLWESDQYGLLRFNEVAGEFQQFQVLLQRFIENEPFQGPRVENYARNRCAMRNLLQVPVIREDNAKDKRKFRKREADKDAVTSDRLVEILEESIRTIWRFIRADKDASSLGLKGLRENQVELQDPSDSELFVEIRTDLQKKEKRLRELLRSGSCILKRFQKHHEDEGDQVLYFFSQVDMKLVWRVLNMSRITTDQLAWCRSKLNKINFVNRRIHVEPSFLLFPSFTPLTKMVQRLTYRTRHSYATKSNQHRVVKTPGGKLVYQGTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLPRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKTKEKQASKS 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2635g00001 880 PRINTS Ribosomal protein L34 signature 773 786 IPR008195 GO:0003735|GO:0005840|GO:0006412
Mupr2635g00001 880 PRINTS Ribosomal protein L34 signature 826 848 IPR008195 GO:0003735|GO:0005840|GO:0006412
Mupr2635g00001 880 PRINTS Ribosomal protein L34 signature 786 803 IPR008195 GO:0003735|GO:0005840|GO:0006412
Mupr2635g00001 880 PRINTS Ribosomal protein L34 signature 804 814 IPR008195 GO:0003735|GO:0005840|GO:0006412
Mupr2635g00001 880 PANTHER OS09G0413600 PROTEIN 6 754 - -
Mupr2635g00001 880 Gene3D - 761 798 - -
Mupr2635g00001 880 MobiDBLite consensus disorder prediction 338 355 - -
Mupr2635g00001 880 Gene3D - 799 880 - -
Mupr2635g00001 880 Coils Coil 661 681 - -
Mupr2635g00001 880 MobiDBLite consensus disorder prediction 336 355 - -
Mupr2635g00001 880 Coils Coil 315 335 - -
Mupr2635g00001 880 Pfam Ribosomal protein L34e 761 856 IPR008195 GO:0003735|GO:0005840|GO:0006412
Mupr2635g00001 880 Coils Coil 372 392 - -
Mupr2635g00001 880 ProSitePatterns Ribosomal protein L34e signature. 775 788 IPR018065 -
Mupr2635g00001 880 Pfam Protein of unknown function (DUF1666) 505 753 IPR012870 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2635g00001 Mupr-Chr2635 17743 27109 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2635g00001 761 879 Cytoplasmic Ribosomal Protein Gene Family AT1G69620 90.756 3.42e-67 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2635g00001 - - gmx:100785051 1228