Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11983g00004 ATGGAGCAAGCTCCGGGAGGATTGCGCGGATCCGTGCACGACGGCACCACACTCGAGTCCATTCAATTCAACGAAGAAATTCAGGGAATCATGGCGCCGGCGCCGGCGCCAGAAAACGCCAGCTCGTTCACCGCGCTGCTCGAACTCCCGCCGACGCAGGCCGTCGAGCTACTTCACTCGCCGGACTCTGACAACGCCGCCGCTCGGAAACCGCCTAATTGCCACGTCAACGCGAATCAGAAACCCTATTTGCTCAACTCTTTCGGTGGCAATTTGACCTTCCCCTCCAACGCCGCCTTAATTGAACGCGCCGCCAAGTTATCCGTGTTCGCCGGTGAGAACTCGCCGCCGCCGGGGGAGGCGCGCCTGGTTCCGGCCGGGTCTGGTTCGAATTTGGATAGGGTGAAGAACGAGCCTCAAGAGACCGATTCGAACCCGTGTTCGACGCAGGGGTGCGTTTCGGATCCCGCGGTTGAGAATAAGAATCAAAGGACCGCGAAGAGAAAGGAGCGAGAGAAGAAGGTAACGGTTAAAGGATCGTCAAAGAAGAGTAAGAGCGTCGCTGATGAGACCTCCGGTGACGGCGAGAAGCTTCCCTACGTCCATGTTCGAGTTCGTCGAGGTCAAGCCACAGACAGCCATAGCTTGGCAGAAAGGGCTAGGAGAGAAAAGATCAATGCTCGCATGAAGCTTTTACAAGAGCTGGTCCCAGGCTGCGACAAGATATCAGGAACGGCAATGGTTCTGGATGAAATCATCAACCATGTGCAGTCTCTACAGCGTCAAGTGGAGATCTTATCAATGAAACTGGCAGCAGTTAACCCAAGAATTGATTTCAGCCTCGATAGCTTATTGGCTACTGATTCAGGGGTTGCCGGCTTGATTTCTAGAATTGAAAATGACCGTTTATGCTTTATATGGCCAGTTCAACCTTTTCAGTTAATGTTGAGAGCTGCTGATAAAATCTCCTTTGTAACTCAGGGGGCATCTCTAATGGACAGTAACTTAACTAGCATGGTGACACCTCTCATGTGGCCAGAAATCCCACCCAATGGCAATCGACAGCATTTTCAACAACAGTGGCAATTCGAAGCATTCCACCAACCACTATGGGAGAGGGAAGAAGTCAACCATAATTTCATGACTCCGGAAAACTCACTTTTGAGTTATGACTCGTCGGCAACCTCAGCGTCTCTGCACTCAAATCAATTGAAGATGGAGCTCTGA 1227 0.5183 MEQAPGGLRGSVHDGTTLESIQFNEEIQGIMAPAPAPENASSFTALLELPPTQAVELLHSPDSDNAAARKPPNCHVNANQKPYLLNSFGGNLTFPSNAALIERAAKLSVFAGENSPPPGEARLVPAGSGSNLDRVKNEPQETDSNPCSTQGCVSDPAVENKNQRTAKRKEREKKVTVKGSSKKSKSVADETSGDGEKLPYVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCDKISGTAMVLDEIINHVQSLQRQVEILSMKLAAVNPRIDFSLDSLLATDSGVAGLISRIENDRLCFIWPVQPFQLMLRAADKISFVTQGASLMDSNLTSMVTPLMWPEIPPNGNRQHFQQQWQFEAFHQPLWEREEVNHNFMTPENSLLSYDSSATSASLHSNQLKMEL 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11983g00004 408 MobiDBLite consensus disorder prediction 112 195 - -
Mupr11983g00004 408 Gene3D - 206 278 IPR036638 GO:0046983
Mupr11983g00004 408 SMART finulus 215 265 IPR011598 GO:0046983
Mupr11983g00004 408 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 108 392 IPR024097 GO:0006355
Mupr11983g00004 408 MobiDBLite consensus disorder prediction 161 195 - -
Mupr11983g00004 408 Coils Coil 249 269 - -
Mupr11983g00004 408 MobiDBLite consensus disorder prediction 141 160 - -
Mupr11983g00004 408 FunFam transcription factor bHLH48-like isoform X1 206 278 - -
Mupr11983g00004 408 CDD bHLH_AtBPE_like 199 284 - -
Mupr11983g00004 408 Pfam Helix-loop-helix DNA-binding domain 213 260 IPR011598 GO:0046983
Mupr11983g00004 408 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 207 278 IPR036638 GO:0046983
Mupr11983g00004 408 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 209 259 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11983g00004 Mupr-Chr11983 16009 25358 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11983g00004 6 408 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G57800 47.430 8.94e-101 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr11983g00004 HLH 2.7e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11983g00004 - - vun:114168708 629.402