Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2645 ATGAAGATGAAGGAGGAAGAGGATGAAGGTGAGAAAAACAGGATTAATAATCAAACTGCCACGTGTTCGGGATCATCTTCTTTGACACCTTCGTCTTCTTCAGATGAAAGAGAGTACCAAGTGCAGGATCTTCGAGATAAATTGAAATCATCGCGAGGAAGCAGATTCAATCTGATAGAGAAAGAATTAGGGTTAAAGATTGGTTGGAGAAAGTTCAGTCGTCGAACTCTTCTTCATGAATTCGTTATAAATCCTCTTAACAGGTGGTATCGTGCATGGCTCAAATTTATATTGTTATGGGCAGTATACTCATCTTTCTTCACCCCAATGGAGTTTGGGTTTTTTCGTGGCCTGCCAGAGAATCTCTTTATACTGGATATCGTAGGACAAATAGCTTTTCTTGTGGACATTGTTTTGCAGTTCTTTGTTGCTTATAGAGATAGTCAGACCTATCGCATGGTTTACAAGCGTACTCCTATTGCTCTGCGGTATCTAAAATCCACCTTTGTCATTGATCTTCTTGGATGTATGCCTTGGGACCTCATCTACAAGGCTTGTGGACGGAGAGAGGAAGTGAGGTACCTATTATGGATCAGATTATATAGGGCAGAGAGAGTTGTGCAATTTTTCAGGAATTTGGAGAAAGATATACGTGTCAATTACATTATTGCTCGGATTGTGAAACTTTTAGTTGTTGAACTCTACTGCACTCACACAGCAGCCTGCATATTCTACTATTTGGCTACTACACTACCTGAATCCCAAGAGGGCTACACATGGATAGGAAGTTTGAAACTGGGTGACTATGCTTATTCAAAGTTCAGAGAAATTGATATTTGGAAGCGCTACACGACATCGTTGTATTTTGCTATTGTTACTATGGCTACTGTCGGATATGGAGATATACATGCAGTAAATTTGAGGGAGATGATATTCATAATGATTTATGTTTCATTTGACATGGTTCTTGGTGCTTACTTGATCGGTAACATGACAGCCTTGATAGTCAAGGGATCAAAGACTGAAAAGTTTAGGGACAGGATGACAGATTTGATGAAATATATGAATAGAAATAAACTTCATAAGGATATCCGTGAACAAATAAAGGGCCACGTGCGTTTGCAGTTTGAAAGCAGCTACACTGACGCTGCAGTCCTTCAGGATATTCCCATTTCTATTCGATCTAAGATATCCGAATCATTGTATTCGCCATACATAAAAAACGTTTCTCTTTTTAGTGGATGCTCTTCAGAATTCATCAATCAGATTGTTACTAGGCTCCATGAGGAATTCTTTCTTCCTGGGGAAGTTATAATGCAACAAGGTTACGTTGTAGATCAACTATATTTTGTCTGTGATGGTGTGCTGGAGGAAGTAGGCATAGCTGATGATGGGTCCGAGGAAACTGTTGCACTTCTAGAGCGCAACAGCTCATTTGGAGAAATATCTATTCTTTGCAACATTCCTCAGCCACATACTGTTCGTGTTTGTGAACTATGTAGGGTCCTGCGGATTGACAAACAATCATTTTCAAATATCCTAGATATATACTTTTATGATGGGAAGAAAGTATTGGACAACCTTCTAGAGGGAAAAGAGTCTATCAGAGGTAAGCAATTGGAGTCAGACATCACATTCCACATTGGAAAGCTAGAATCTGAACTTGCTTTGAAGGTCAACAGAACAGCTTTTGATGGCGATCTGTACCAGCTAAAAAGTTTGATTCGAGCTGGAGCTGATCCCAAGAAGACAGATTATGATGGAAGATCACCTCTGCATCTTGCTGCATGCAGAGGATATGAAGATATCACACTTCTTCTTATTCATGAACGTGTAGACATGAACGTCAAAGATAACTTTGGGAACACACCGCTACTTGAAGCAGTTAAGAATGGACACGATCGGATTGCTTCTTTACTTGTTAGAGAAGGGGCCTCGTTGAAGATAGATGATGGTGGTAGTTTTTTATGCTCAGCAGTTGCAAGAGGAGATTCGGATTATCTTAAAAGGCTTTTATCAAATGGAATGGATGCTAACTTGAAAGATTATGACTATCGTACCCCCCTACACGTTGCTGCATCTGAAGGATTAATCTTCATGGCAAAGTTGTTATTAGAAGCCGGAGCTAGTGTTTTTACCAAAGACAGATGGGGAAATACCCCGCTTGATGAAGCTCGGATGAGTGGAAACAAAAATCTGATAAAGCTACTGGAAGATGCAAAATCAGCTCAATTGACAGAATTCCCTTTTCCCCAAGAAATTACAGATAAAGTACATCCAAAGAAGTGCACAGTGTTCCCTTTCCATCCGTGGGATCCAAAAGAACAAAGAAGAAATGGAATAGTATTATGGATTCCACACACCATTCAAGAGCTAATCATAACAGCGGCAGAACAGATAGGATTTTCCAGCGACGCTTGTATATTATCAGAAGATGCTGGTAAAATTATTGACATTAGCATGATTAAGGATGATCAGAAGCTGTATTTAGTCAATGAAACGCATTAG 2508 0.3967 MKMKEEEDEGEKNRINNQTATCSGSSSLTPSSSSDEREYQVQDLRDKLKSSRGSRFNLIEKELGLKIGWRKFSRRTLLHEFVINPLNRWYRAWLKFILLWAVYSSFFTPMEFGFFRGLPENLFILDIVGQIAFLVDIVLQFFVAYRDSQTYRMVYKRTPIALRYLKSTFVIDLLGCMPWDLIYKACGRREEVRYLLWIRLYRAERVVQFFRNLEKDIRVNYIIARIVKLLVVELYCTHTAACIFYYLATTLPESQEGYTWIGSLKLGDYAYSKFREIDIWKRYTTSLYFAIVTMATVGYGDIHAVNLREMIFIMIYVSFDMVLGAYLIGNMTALIVKGSKTEKFRDRMTDLMKYMNRNKLHKDIREQIKGHVRLQFESSYTDAAVLQDIPISIRSKISESLYSPYIKNVSLFSGCSSEFINQIVTRLHEEFFLPGEVIMQQGYVVDQLYFVCDGVLEEVGIADDGSEETVALLERNSSFGEISILCNIPQPHTVRVCELCRVLRIDKQSFSNILDIYFYDGKKVLDNLLEGKESIRGKQLESDITFHIGKLESELALKVNRTAFDGDLYQLKSLIRAGADPKKTDYDGRSPLHLAACRGYEDITLLLIHERVDMNVKDNFGNTPLLEAVKNGHDRIASLLVREGASLKIDDGGSFLCSAVARGDSDYLKRLLSNGMDANLKDYDYRTPLHVAASEGLIFMAKLLLEAGASVFTKDRWGNTPLDEARMSGNKNLIKLLEDAKSAQLTEFPFPQEITDKVHPKKCTVFPFHPWDPKEQRRNGIVLWIPHTIQELIITAAEQIGFSSDACILSEDAGKIIDISMIKDDQKLYLVNETH* 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2645 835 CDD CAP_ED 411 517 IPR000595 -
Mtr5g2645 835 Pfam Ankyrin repeats (3 copies) 565 650 IPR002110 GO:0005515
Mtr5g2645 835 Pfam Ankyrin repeats (3 copies) 657 738 IPR002110 GO:0005515
Mtr5g2645 835 PANTHER POTASSIUM CHANNEL SKOR-LIKE 32 834 - -
Mtr5g2645 835 SUPERFAMILY Voltage-gated potassium channels 85 336 - -
Mtr5g2645 835 Gene3D Helix hairpin bin 338 394 - -
Mtr5g2645 835 ProSiteProfiles Ankyrin repeat profile. 620 652 IPR002110 GO:0005515
Mtr5g2645 835 SMART cnmp_10 411 529 IPR000595 -
Mtr5g2645 835 Pfam KHA, dimerisation domain of potassium ion channel 761 830 IPR021789 -
Mtr5g2645 835 Pfam Ion transport protein 91 336 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mtr5g2645 835 PRINTS Ankyrin repeat signature 588 603 IPR002110 GO:0005515
Mtr5g2645 835 PRINTS Ankyrin repeat signature 700 714 IPR002110 GO:0005515
Mtr5g2645 835 Pfam Cyclic nucleotide-binding domain 431 515 IPR000595 -
Mtr5g2645 835 SUPERFAMILY Ankyrin repeat 563 739 IPR036770 -
Mtr5g2645 835 ProSiteProfiles Ankyrin repeat region circular profile. 684 716 - -
Mtr5g2645 835 ProSiteProfiles Ankyrin repeat profile. 587 619 IPR002110 GO:0005515
Mtr5g2645 835 ProSiteProfiles Ankyrin repeat region circular profile. 651 682 - -
Mtr5g2645 835 SMART ANK_2a 717 747 IPR002110 GO:0005515
Mtr5g2645 835 SMART ANK_2a 684 713 IPR002110 GO:0005515
Mtr5g2645 835 SMART ANK_2a 651 680 IPR002110 GO:0005515
Mtr5g2645 835 SMART ANK_2a 620 649 IPR002110 GO:0005515
Mtr5g2645 835 SMART ANK_2a 587 616 IPR002110 GO:0005515
Mtr5g2645 835 Gene3D - 94 337 - -
Mtr5g2645 835 Gene3D Jelly Rolls 395 532 IPR014710 -
Mtr5g2645 835 Gene3D - 553 650 IPR036770 -
Mtr5g2645 835 Gene3D - 651 747 IPR036770 -
Mtr5g2645 835 PANTHER POTASSIUM CHANNEL AKT1 32 834 IPR045319 GO:0005249|GO:0006813
Mtr5g2645 835 SUPERFAMILY cAMP-binding domain-like 339 528 IPR018490 -
Mtr5g2645 835 ProSiteProfiles Ankyrin repeat region circular profile. 587 619 - -
Mtr5g2645 835 ProSiteProfiles Ankyrin repeat profile. 651 683 IPR002110 GO:0005515
Mtr5g2645 835 ProSiteProfiles cAMP/cGMP binding motif profile. 411 514 IPR000595 -
Mtr5g2645 835 ProSiteProfiles KHA domain profile. 762 835 IPR021789 -
Mtr5g2645 835 PRINTS EAG/ELK/ERG potassium channel family signature 126 136 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mtr5g2645 835 PRINTS EAG/ELK/ERG potassium channel family signature 235 245 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mtr5g2645 835 PRINTS EAG/ELK/ERG potassium channel family signature 283 300 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mtr5g2645 835 PRINTS EAG/ELK/ERG potassium channel family signature 327 336 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mtr5g2645 835 MobiDBLite consensus disorder prediction 1 39 - -
Mtr5g2645 835 MobiDBLite consensus disorder prediction 15 37 - -
Mtr5g2645 835 ProSiteProfiles Ankyrin repeat profile. 684 716 IPR002110 GO:0005515
Mtr5g2645 835 ProSiteProfiles Ankyrin repeat region circular profile. 620 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2645 Mtr-Chr5 34494594 34505566 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2645 658 737 Ion Channels AT5G37500 34.314 1.25e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2645 K21867 - gmx:100814385 1407.51