Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04397 ATGACACAAACAACAACAACCTCTTCATCATTTTCACAAGAATCACCACCAACACATTCCATTCAGATACAAAGTCCAACACGGCCCAAAAGGCCCAGAGACGACGACAACAACAACGACAACAAACATCCAACTTACCACGGAGTAAGAAAACGAAACTGGGGAAAATGGGTATCTGAAATCCGGGAACCACGCAAGAAATCAAGAATCTGGCTAGGAACATTTTCAACACCAGAAATGGCAGCTAGAGCGCACGATGTAGCAGCTTTAACCATCAAAGGAAAAACCGCAATTCTCAATTTTCCTCATTTATCAAACATGCTTCCAAGACCAGCAACATCAGCACCACGTGACATTCAAGCCGCAGCAACCGCTGCAGCTGCTATGGTTGACTTTGATGATCCTGTCATGCACGTGACAAGTTGTTCTGAATCTGAATCTGTTGAAGAACTTAGTCAAATTGTTGAACTTCCTAAAATTAATGAAGAAGGTGAAGATGACTCAGTTGATAGTACTTGGGTTTATCATCATCCTTCTCCGTTAATTGGGTTTGAAGGAATTGAATTCTATGCTACTTTTTCTGATGATTTTTTGTTACCACTTTGGGATTAA 612 0.4101 MTQTTTTSSSFSQESPPTHSIQIQSPTRPKRPRDDDNNNDNKHPTYHGVRKRNWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGKTAILNFPHLSNMLPRPATSAPRDIQAAATAAAAMVDFDDPVMHVTSCSESESVEELSQIVELPKINEEGEDDSVDSTWVYHHPSPLIGFEGIEFYATFSDDFLLPLWD 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04397 203 CDD AP2 46 104 IPR001471 GO:0003700|GO:0006355
Mepo1g04397 203 PRINTS Ethylene responsive element binding protein signature 46 57 IPR001471 GO:0003700|GO:0006355
Mepo1g04397 203 PRINTS Ethylene responsive element binding protein signature 68 84 IPR001471 GO:0003700|GO:0006355
Mepo1g04397 203 SMART rav1_2 45 108 IPR001471 GO:0003700|GO:0006355
Mepo1g04397 203 MobiDBLite consensus disorder prediction 1 49 - -
Mepo1g04397 203 ProSiteProfiles AP2/ERF domain profile. 45 102 IPR001471 GO:0003700|GO:0006355
Mepo1g04397 203 MobiDBLite consensus disorder prediction 1 27 - -
Mepo1g04397 203 Pfam AP2 domain 45 94 IPR001471 GO:0003700|GO:0006355
Mepo1g04397 203 Gene3D AP2/ERF domain 45 103 IPR036955 GO:0003700|GO:0006355
Mepo1g04397 203 MobiDBLite consensus disorder prediction 28 49 - -
Mepo1g04397 203 FunFam Ethylene-responsive transcription factor 2 45 103 - -
Mepo1g04397 203 SUPERFAMILY DNA-binding domain 45 103 IPR016177 GO:0003677
Mepo1g04397 203 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 20 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04397 Mepo-Chr1 51592041 51593019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04397 24 170 AP2-EREBP Transcription Factor Family AT5G11590 53.333 4.57e-48 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo1g04397 AP2 2.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04397 K09286 - gmx:100804056 200.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g04397 1 51592041 51593019 Mepo1g04397 1 51592041 51593019 ECH