Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0510 ATGAGTTATAGTAATGAAACGAACAAGCATTCACCGTCTCCAGAAAGATCGCTCCCTCCAATGCCCAACATTAATTTGGAGAAACTCTCGCAGGAAGATAAAAATTCGCGACCGGCACCGCCCCCTTCAAAGTCGGATAAGGGTTCGGATGAGGATGACGCTCCGCCACCGAAGTCTAATGATTCAAACTCCTCATCGAAGACACCGCCATTGCTGTCTCAGGCTACTCAGATTCTGCCCCGCTCACAGTCACCTAAAGAATCACCTTCCAAGAAATCACCGCCAGCACCGCCACCGCCTCCTCCACCGGTAGCGTCACCACCTCCTCCACCGGTAACGCCACCGCCTCCTTCATCGGTAAAGCAATCGCCTCATTCACCACCACCTCCACCCTCACTCTCGCAACCTCCCACCTCTTCGCCGCCACCGCCACCGCCACCGCCATCATCGAGTAATATGGAAAATCACTCTCCTGGTCCCCCTGAACAGTCAGCATCATCACCAGATTCACAAGTCCCGTCATCTTTGAATACCACTTCTGATAAATCACCACCACCACCACAACCTTTTGTTAGTGTCATTTTCCCGTCGTTGATTCAAAGCGTCCCGTCGCCACAAAAGCAGGTTGAAGAGGGTGTTGAATCTAGTTCGAATCATCCTTCACCTCCCCCCTTACAAAGACTTAACGCTGGCTCAAATACAAGACCAAGTGGTTCTTCTAACGACTCCGTGCCGTCAACATCAGGCGGTGATCGTGGCAGTGGTGGAGACGGTAATGCAGCAAAATATGTGGGTATTGCGTTCGCCGGAGTCTGTATCGTCGTCTTTGTTGGTTTATGTTTTTTGGTCGCGAAAATAAGAAAGAGAAAACGAGGGGCCGTCCATGATGTATCGCACATACCGCCAAATACGAAAGCAGTTTGTTCCCAATGGAACGCTCGATCATCACTTGCATGAGCCGTTGGTTCCAAAATATCCATGCCAACCTTTGATTTTCTATCTTCTAGGCCAAAGACAAAAGTTCTTTATGCGGCTGTTCACTCATTTCATCTCTTAACTGTGCTGATATTTGATGAACTGCTAGATATCAGTATGAATGGACAAAAGTACATGGCTCCAGAGTATGCAACAAGTGGAAAATTAACGGATAGGTCTGATGTTTTCTCCTTTGGAGTTGTCCTCCTAGAGCTTTTGACTGGTAGGAAACCAGTTGATCCAACTCAACCCCTGGGAGAAGAGAGTTTGGTTGAGTGGGCTAGACCTCATCTCATTCATGCAGTTGAGTCTGGTGACTATAGCAAACTAATAGACACAAGGCTTGAAAATCATTATGTGGAGAGTGAAGTACTTAGGATGATCGATGCAGCTGCAGCATGTGTTCGCCATTCTGCTCCAAAACGGCCCCGGATGCTACAGGTCGCGAGAGCCTTAGATAGTGGAGGTGAACTAGTTGACCTATCCAACGGAGTGAAATATGGTCAGAGCACTGCTTATGATTCTGGACAGTATGATGAAGAAATTATGAGACTTAGGATGATGAGTAGTGTAAGTTTTGGAAGTTCTGAATTTGATTTGCAAAGTGAAGAACACAGTTCAAGAGAATTATCTGGCTTCCGACACGCATTTGGCCATGATTGTTCTGGTGTCGAGTCCGGCTCTCGAGCTTTCGGCCAAGGTGGGAGCAGTGGGCAAACGAAGGAATAA 1704 0.4783 MSYSNETNKHSPSPERSLPPMPNINLEKLSQEDKNSRPAPPPSKSDKGSDEDDAPPPKSNDSNSSSKTPPLLSQATQILPRSQSPKESPSKKSPPAPPPPPPPVASPPPPPVTPPPPSSVKQSPHSPPPPPSLSQPPTSSPPPPPPPPSSSNMENHSPGPPEQSASSPDSQVPSSLNTTSDKSPPPPQPFVSVIFPSLIQSVPSPQKQVEEGVESSSNHPSPPPLQRLNAGSNTRPSGSSNDSVPSTSGGDRGSGGDGNAAKYVGIAFAGVCIVVFVGLCFLVAKIRKRKRGAVHDVSHIPPNTKAVCSQWNARSSLAXAVGSKISMPTFDFLSSRPKTKVLYAAVHSFHLLTVLIFDELLDISMNGQKYMAPEYATSGKLTDRSDVFSFGVVLLELLTGRKPVDPTQPLGEESLVEWARPHLIHAVESGDYSKLIDTRLENHYVESEVLRMIDAAAACVRHSAPKRPRMLQVARALDSGGELVDLSNGVKYGQSTAYDSGQYDEEIMRLRMMSSVSFGSSEFDLQSEEHSSRELSGFRHAFGHDCSGVESGSRAFGQGGSSGQTKE 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0510 567 MobiDBLite consensus disorder prediction 90 154 - -
Lele55g0510 567 SUPERFAMILY Protein kinase-like (PK-like) 369 475 IPR011009 -
Lele55g0510 567 MobiDBLite consensus disorder prediction 155 179 - -
Lele55g0510 567 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 365 514 - -
Lele55g0510 567 MobiDBLite consensus disorder prediction 58 89 - -
Lele55g0510 567 Gene3D Transferase(Phosphotransferase) domain 1 353 486 - -
Lele55g0510 567 MobiDBLite consensus disorder prediction 194 253 - -
Lele55g0510 567 Pfam Protein tyrosine and serine/threonine kinase 368 475 IPR001245 GO:0004672|GO:0006468
Lele55g0510 567 PRINTS Proline rich extensin signature 95 111 - -
Lele55g0510 567 PRINTS Proline rich extensin signature 73 94 - -
Lele55g0510 567 PRINTS Proline rich extensin signature 137 162 - -
Lele55g0510 567 PRINTS Proline rich extensin signature 114 131 - -
Lele55g0510 567 MobiDBLite consensus disorder prediction 1 256 - -
Lele55g0510 567 MobiDBLite consensus disorder prediction 548 567 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0510 Lele-ChrLele55 3251428 3255798 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0510 370 534 Trihelix Transcription Factor Family AT1G70460 67.273 5.43e-70 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Lele55g0510 PK_Tyr_Ser-Thr 1.8e-08 CL0016