Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0796 ATGGCGACGGCGAGTAACAGTGGCAAATCCACAGAGGGTGGTGGTGGAGAAAGCCGTGATTGGGAGATTGAAAGAGATAAAGACATAGATTTGAGAGGTGAGAGGCGACAATGGAAGCCAGTTTTTGAGGATGCTTCCATGTCGAACAGGCCTCTGAAGAAAATACGAAGCCCAAAACTTGAAAACTCAAACAAAAATCAATCCTCTGTCCCCATTCTACCACATCCTCCTTCTTCATCTTCTTCCAGAATCGTCTTCCCTTTTGCCTTCGATGCTTCTCAACAGACTCTGCAATTTCCCCATCACTCCACCAATTTACCTGCGCTTCGCCCACCGTTTACTCAAAATCAGCAGCAGATGATATCTTTTTGCTCCCAACAACAGCAGAACATGGGGTATCCTCAATTATTCGCCCAAGCCTCTGCAATCGCACACCAGCAACATCATCGTCATCAACAGCAGCAACTTCTTCGGTATTGCAGAGACGCATTGAATCTGAGTCCAAGAGGAAGGATGATGATGATGGTGAACAGAGTAGGGCCGGACGGGAGGCCAATGTATCGGCCACCTCCTCAGCCTATAAATACTACGAAGCTTTACAGAGGAGTGAGGCAGCGTCATTGGGGAAAATGGGTGGCTGAGATTCGTCTTCCTCGTAACAGGACTCGCCTCTGGCTCGGAACATTCGACACAGCTGAAGATGCTGCTTTAGCTTATGATCGCGAGGCCTTTAAGCTCAGAGGAGAGAATGCTCGGCTCAATTTCCCAGAGCTCTTCCTTAATAAGGATAAGCCATCCTCAACAACAGCCCCTGATTCCTCTGCTTCTTCTCCATCGAAGCAAACTGACTCTGCTCCAGAAGCTCCGATTGCCGAGGAGGAGAAGCCTCCGCAACCGCCACCGGAAGAGAGAACCGACAATGATTCTGGAATTGGGTCGAGTGACGCTACAATGAGCGACGAAGTTCAGGCTGCATCTAATACTGGAACAGTGGAGGGAACTTCGGCGGCGTCGCAAGAACTGGTTTGGGGAGAAATGGCGGCGTGGTTCAATGCAATTCCGGCGGGTTGGGGTCCGGGTAGCCCGGTATGGGATGATTTGGATACGTTTCAGTCACAACTTCCATTTTTCAATCCCAATCACCAAGAATTCAATGATGCAGATCATCAGAGACAGAAAGAAAATAATACAGTTCCATCAGATTCTTCCACTTCTTCTTGTCCAGTGAGACCCTTGTTCTGGAAAGGTCAAGATTGA 1257 0.4877 MATASNSGKSTEGGGGESRDWEIERDKDIDLRGERRQWKPVFEDASMSNRPLKKIRSPKLENSNKNQSSVPILPHPPSSSSSRIVFPFAFDASQQTLQFPHHSTNLPALRPPFTQNQQQMISFCSQQQQNMGYPQLFAQASAIAHQQHHRHQQQQLLRYCRDALNLSPRGRMMMMVNRVGPDGRPMYRPPPQPINTTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAALAYDREAFKLRGENARLNFPELFLNKDKPSSTTAPDSSASSPSKQTDSAPEAPIAEEEKPPQPPPEERTDNDSGIGSSDATMSDEVQAASNTGTVEGTSAASQELVWGEMAAWFNAIPAGWGPGSPVWDDLDTFQSQLPFFNPNHQEFNDADHQRQKENNTVPSDSSTSSCPVRPLFWKGQD 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0796 418 MobiDBLite consensus disorder prediction 61 78 - -
Lele10g0796 418 Gene3D AP2/ERF domain 199 257 IPR036955 GO:0003700|GO:0006355
Lele10g0796 418 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 16 367 - -
Lele10g0796 418 SMART rav1_2 199 262 IPR001471 GO:0003700|GO:0006355
Lele10g0796 418 SUPERFAMILY DNA-binding domain 199 257 IPR016177 GO:0003677
Lele10g0796 418 Pfam AP2 domain 200 248 IPR001471 GO:0003700|GO:0006355
Lele10g0796 418 MobiDBLite consensus disorder prediction 1 78 - -
Lele10g0796 418 ProSiteProfiles AP2/ERF domain profile. 199 256 IPR001471 GO:0003700|GO:0006355
Lele10g0796 418 MobiDBLite consensus disorder prediction 396 410 - -
Lele10g0796 418 MobiDBLite consensus disorder prediction 258 316 - -
Lele10g0796 418 MobiDBLite consensus disorder prediction 261 284 - -
Lele10g0796 418 MobiDBLite consensus disorder prediction 15 41 - -
Lele10g0796 418 CDD AP2 198 258 IPR001471 GO:0003700|GO:0006355
Lele10g0796 418 PRINTS Ethylene responsive element binding protein signature 200 211 IPR001471 GO:0003700|GO:0006355
Lele10g0796 418 PRINTS Ethylene responsive element binding protein signature 222 238 IPR001471 GO:0003700|GO:0006355
Lele10g0796 418 MobiDBLite consensus disorder prediction 377 418 - -
Lele10g0796 418 FunFam Ethylene-responsive transcription factor 2 198 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0796 Lele-ChrLele10 6308033 6309289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0796 1 366 AP2-EREBP Transcription Factor Family AT2G20880 41.333 1.13e-62 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele10g0796 AP2 3e-13 CL0081