Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0045 ATGCATTTATTATCTGTTGCCATTGCACATTATGCTTTTGTTCTAACTATCTTCACCAGGAAAAGATACGAGTCGCTTTCTATGTTCAGAAAGCAGCGTTGCATTTTATTAACGGTACTCAAATTACACGTTTATTCGCTTTCTTTCATGTTTAATATTTGGTACATTCTTTTGTTACATTTTTTCTCTTTTCTTTCAATTCCTTCTCATACAGCTAGAAGCCGTGGTGGTGGTGGTGGTGGTGGTGGTTACATGCTATCCAAAGAGGTTCAGGAAGCTGGTTTTGGAATTGAGCCAGATGAATTAGGATCCATTGTTCGTTCCCATGACATCAAATGCTTAGAAAATCATGGTGGAATTGATGGATTAGGAAGACATGTTTGTGTGTCATTGCAAGATGGTGTTAATTCTTGTGATGTTTCTCATAGACAGGATATCTATGGTGTTAACCGCTACGCGGAGAAGCCCTCTAGAAGTTTCTGGATGTTTGTTTGGGATGCAATGCAAGACTTAACTCTAATGATCCTTATGTTATGTGCTGCGATCTCAGCAGCTGTTGGAATTTCAACTGAGGGATTCCCGAAAGGTGTGTATGATGGATTTGGAATCATACTGTGTATTCTTTTAGTGGTCTTTGTCACTTCAATCAGTGACTATAAACAGTCTTTGCAATTTATGGATTTGGACAAGGAAAAGAAGAACGTTAGCATTCAAGTTACAAGAGATGGTAGAAGACAAAAGGTTTCAATTTATGATCTAGTGATAGGAGATACAGTCCATCTGTCAATTGGAGATGTAGTTCCTGCAGATGGGTTATTTATATCAGGATTTAGCTTGTTAATTGATGAGTCAAGCCTATCAGGTGAGAGTGAGGCTGTGAATGTTGATCAACACAATCCATTTCTTCTATGTGGAACTACAGTGCAAGATGGGTCTGCTAAGATGCTAGTAACTTCTGTTGGTATGAGGACTGAATGGGGAAGATTGATGGATACTCTGAATGAAGGTGGAGATGATGAGACACCTCTTCAGGTCAAACTAAATGGGGTTGCTACCATTATTGGAAAAATAGGATTGGGTTTTGCCCTGCTCACATTCCTGGTTCTGACTGGCAGGTTTTTGTTAGAGAAAATAGCTCACCATAACATCACTCACTGGTCTCTAAATGATGCATCTAAGCTTCTTGATTTCTTTGCTACTGCCGTTATTATAATAGTTGTGGCAGTTCCTGAGGGGTTACCTTTGGCTGTGACATTAAGTCTTGCATTTGCAATGAAGAAATTAATGAATGATAAGGCACTAGTCAGGCACCTCTCTGCATGTGAGACCATGGGTTCTGCTGGTTGTATTTGCACTGACAAAACTGGGACTTTGACAACAAATCACATGGTTGTAGACAAAATATGGATTTGTGAACAAACTAAGACAATAAAAAGCAGCGATAGTGAAAATGTGTTGAAGCCCTCACTTTCTGAAGAGATATTTGATCTCCTTTTGCAGTCCATATTCCAGAATACTGGATCAGAGATAGTTAAAGGGCAAGATGGAAGGAACAAAGTTATGGGTACTCCGACAGAGTCAGCACTACTGGAATTTGGAATGCTTTTAGGAGGTGATTCTAAGTCTTATAATGAGAAGTATAAGATAGTTAAGGTTGAACCTTTCAATTCAATCAGAAAAAAGATGTCTGTGCTTGTAGTTCTTCCTGATGGCACTAACAAGTTTAGAGGATTTTGTAAAGGAGCATCAGAAATAATTTTGGAAAAGTGTGACAAAGTTGTTAATGCAGAAGGCAAAGTCGACAAAATGAATGAAGATCAAAGAAAGAGCATCACAGAAATTATCGATGGTTTTGCTTCTGAGGCTCTCAGGACACTCTGCATTGCGTTCAAGGATATTGAAGGATCTTCTGAAGGTAATAGTATTCCTGAGGATAATTACACCCTGATTACTATTATTGGGATCAAGGATCCAGTGAGGCCTGGAGTTAAAGAAGCTGTGAAGACTTGTCTAGCAGCTGGGATTACTGTTCGAATGGTAACTGGTGATAACATAAATACTGCTAAGGCAATAGCTAGAGAATGCGGTATCTTCACAGATGGAGTGGCTATAGAGGGACCAGAATTCCGGAATATGAACCAACAACAGATGGTGGAGATAATACCAAAAATACAGGTAATGGCTAGGTCCTTGCCTCTTGATAAGCACACCTTAGTGACACATTTGAGGAATGATTTTGGTGAAGTTGTGGCAGTAACTGGTGATGGCACTAATGATGCTCCAGCTTTGCATGAGGCTGATATTGGACTTGCTATGGGTATTGCAGGGACTGAGGTTGCAAAAGAAAATGCGGATGTGATTGTAATGGATGACAACTTCACAACCATAGTAAATGTTGCCAGATGGGGCCGTTCTGTTTATATTAATATACAAAAGTTTGTGCAGTTCCAGTTGACAGTTAATGTTGTTGCTCTCATGCTGAATTTTATTTCAGCATGTGTTTCAGGCTCTGCTCCTCTTTCCGCTGTTCAAATGCTTTGGGTGAACATGATCATGGACACTCTTGGCGCATTGGCACTTGCTACAGAACCTCCACATGAAGGGCTGATGAAAAGGCCACCTATTGGAAGGAACACCAAATTCATCACTGGGGTCATGTGGAGGAACATAATTGGCCAGAGCCTCTATCAAATTATTGTCCTTTTGGTCCTTAAATTTCGTGGGAGACAGATTCTCAAGCTTAATGGACCAGATGCTAATTCTGTTCTGAATACTGTCATATTCAATGCATTTGTGTTTTGCCAGGTATTCAACGAGATAAATAGCCGTGACATGGAGAAGATTAATGTTTTCAAAGGCATGTTCACCAGCTGGGTTTTCCTTATGGTCATGATCGCAACAATAGGCTTTCAAGTTATAATAGTTGAGTTTTTGGGTGCTTTTGCTCAAACAGTGCCATTGAGCAAGGAGTTGTGGTTAACCGGTGTCTTAATTGGTGCAGCAAGTTTGGTCATAGCTGTTATACTAAAATGCATTCATGTTTCTCGGACCACTTATGTTGCCACTCATCATGACGGTTATGATCAACTTCCAACTGGACCAGAGCTTGCATGA 3114 0.4001 MHLLSVAIAHYAFVLTIFTRKRYESLSMFRKQRCILLTVLKLHVYSLSFMFNIWYILLLHFFSFLSIPSHTARSRGGGGGGGGYMLSKEVQEAGFGIEPDELGSIVRSHDIKCLENHGGIDGLGRHVCVSLQDGVNSCDVSHRQDIYGVNRYAEKPSRSFWMFVWDAMQDLTLMILMLCAAISAAVGISTEGFPKGVYDGFGIILCILLVVFVTSISDYKQSLQFMDLDKEKKNVSIQVTRDGRRQKVSIYDLVIGDTVHLSIGDVVPADGLFISGFSLLIDESSLSGESEAVNVDQHNPFLLCGTTVQDGSAKMLVTSVGMRTEWGRLMDTLNEGGDDETPLQVKLNGVATIIGKIGLGFALLTFLVLTGRFLLEKIAHHNITHWSLNDASKLLDFFATAVIIIVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSAGCICTDKTGTLTTNHMVVDKIWICEQTKTIKSSDSENVLKPSLSEEIFDLLLQSIFQNTGSEIVKGQDGRNKVMGTPTESALLEFGMLLGGDSKSYNEKYKIVKVEPFNSIRKKMSVLVVLPDGTNKFRGFCKGASEIILEKCDKVVNAEGKVDKMNEDQRKSITEIIDGFASEALRTLCIAFKDIEGSSEGNSIPEDNYTLITIIGIKDPVRPGVKEAVKTCLAAGITVRMVTGDNINTAKAIARECGIFTDGVAIEGPEFRNMNQQQMVEIIPKIQVMARSLPLDKHTLVTHLRNDFGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKENADVIVMDDNFTTIVNVARWGRSVYINIQKFVQFQLTVNVVALMLNFISACVSGSAPLSAVQMLWVNMIMDTLGALALATEPPHEGLMKRPPIGRNTKFITGVMWRNIIGQSLYQIIVLLVLKFRGRQILKLNGPDANSVLNTVIFNAFVFCQVFNEINSRDMEKINVFKGMFTSWVFLMVMIATIGFQVIIVEFLGAFAQTVPLSKELWLTGVLIGAASLVIAVILKCIHVSRTTYVATHHDGYDQLPTGPELA 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0045 1037 Gene3D - 134 334 - -
Lal1g0045 1037 PRINTS P-type cation-transporting ATPase superfamily signature 282 296 - -
Lal1g0045 1037 PRINTS P-type cation-transporting ATPase superfamily signature 451 465 - -
Lal1g0045 1037 PRINTS P-type cation-transporting ATPase superfamily signature 651 662 - -
Lal1g0045 1037 PRINTS P-type cation-transporting ATPase superfamily signature 673 683 - -
Lal1g0045 1037 PRINTS P-type cation-transporting ATPase superfamily signature 753 772 - -
Lal1g0045 1037 PRINTS P-type cation-transporting ATPase superfamily signature 777 789 - -
Lal1g0045 1037 SFLD Haloacid Dehalogenase 433 805 - -
Lal1g0045 1037 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 457 663 IPR023299 GO:0000166
Lal1g0045 1037 Pfam E1-E2 ATPase 236 429 - -
Lal1g0045 1037 CDD P-type_ATPase_Ca_PMCA-like 140 886 - -
Lal1g0045 1037 ProSitePatterns E1-E2 ATPases phosphorylation site. 453 459 IPR018303 -
Lal1g0045 1037 PRINTS H+-transporting ATPase (proton pump) signature 611 629 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal1g0045 1037 PRINTS H+-transporting ATPase (proton pump) signature 753 769 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal1g0045 1037 PRINTS H+-transporting ATPase (proton pump) signature 785 810 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal1g0045 1037 Pfam Cation transporter/ATPase, N-terminus 117 183 IPR004014 -
Lal1g0045 1037 PANTHER CATION TRANSPORTING ATPASE 82 1020 - -
Lal1g0045 1037 SUPERFAMILY Calcium ATPase, transmembrane domain M 118 1014 IPR023298 -
Lal1g0045 1037 SMART Cation_ATPase_N_a_2 116 188 IPR004014 -
Lal1g0045 1037 SFLD p-type atpase 433 805 IPR044492 -
Lal1g0045 1037 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 111 1014 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Lal1g0045 1037 Pfam Cation transport ATPase (P-type) 514 593 - -
Lal1g0045 1037 PANTHER CALCIUM-TRANSPORTING ATPASE 82 1020 - -
Lal1g0045 1037 Gene3D - 461 658 IPR023299 GO:0000166
Lal1g0045 1037 SUPERFAMILY HAD-like 450 858 IPR036412 -
Lal1g0045 1037 Gene3D - 166 1012 - -
Lal1g0045 1037 Gene3D - 448 798 IPR023214 -
Lal1g0045 1037 SUPERFAMILY Calcium ATPase, transduction domain A 236 332 IPR008250 -
Lal1g0045 1037 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 548 699 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal1g0045 1037 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 715 836 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal1g0045 1037 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 203 515 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal1g0045 1037 Pfam Cation transporting ATPase, C-terminus 838 1011 IPR006068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0045 Lal-Chr1 343151 352570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0045 84 1034 Primary Pumps ATPases AT3G57330 69.013 0.0 1358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0045 K01537 - gmx:100805063 1605.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0045 1 343151 352570 Lal2g0021 2 143656 149257 LSH