Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1310 ATGAATTCTCATCATCTTATCTTCTCTCTCTTATTCCCTTTATTCACTGCAAAAGTTATCACAATTCAACTCTCCACTTTCAATGAATATGAATCTCACACATCAAGAAGAATCTTACACCAACCGTTATTCCCGGTCACTTCTGCTCCGCCGCCAACCATCGACTCACCACCGCCGCCACCACCAGATACTCCAACCTCTCGTGACATTCCTTTTTTCAACGAGTATCCAATACCTCCACCGCCACCTCTGCCGGAGCAGCAACTGCCGTCAACTCCCGCCGGCGCAATTGCGACGAATCCAACGGGAATGCAACAAACGAAGCCGACGAAGACAGTCGCAATCGCAATCTCCGTCGGAATCGTAACACTTGGAATGTTATCTGCACTGGCGTTCTTTTTATATAAGTACAGAACAAAGCACACTGTGGAAACAACTCACAAAGAAAGTGAAAATTCCCATTTTGTCCCTGAGAGTTCTAACAATTCTTCTCAACCACCACCACAGTCTAGTTTACTCTACATTGGAACGGTTGAACCGAACCGGTCTTTGTTAAGTGAACCGGACCGAACCGGAAACATTGAGAACCGGTCACTTTATGGGAAACTCGGTAATTCAGTTAAGCTATCGGATCGGTATCGTCCCAGCCCTGAATTGCAGCCACTTCCGCCGTTGAATAAACCTTCCGATGAGAATCAACTGCCGCCGGCGGCATCCTCGTCTTCCTCTTCCGACGAGGAAAGCCGATATACGAGGTTTCATTCACCGTCGCTCAGTCATGAGGAGGATAGCTATTATAATACGCCAGTGTCGTCGCGTCGTAGTTATGGGGATAATGGTAACCCGTCGGCGGCTATTGTTGCCGGAGCTCCGGTTGTTCCTTTCTCGAAGAGAACCTCCCCGAAATCTAGGCTTTTAGCTTCGTCGCCGGATAGGAGGAACATTATGATACCGTCTATAAAAAATTCTCATCAGCCACCGTCAATATCTCCGGCGCCACCACCACTGCAACCTAGAAGGCCGAAATTCTCAGAGCCTCCACCAGCACCGGATTTGAGGCATCTTCATTCAGAAGAGTCCATGACATCACTTCATACTCCACCACCTCCGCCGCCGCCACTGCCACCACCACGACGAGTAATGCCTCGGGGAAAGGTTTGGTCTCCGGTAAGAAGTGCGGCCTCGTCTATTGCTGCCTCGAGAAAGCAGCAACAGTCTTGGTCTCCAAGTCAAGAAGGAGCAGCTTCTGCTTATTCTACTGACAATATCACAAAAGCAGCTTCAGTGGAAACTTATGACATGGATGAAGGGAAACCTAAATTGAAGGCTTTGCATTGGGATAAAGTGCGTGCAACCTCCAACCGTGCCACCGTGTGGGATCGGTTAAAATCAAGCTCCTTTCAGTTAAATGAGGACATGATGGAGAGTCTGTTTGGTTGCAATTCTACAAATTCTGCACCAAAAGAGGTTGTTACTAGAAAGTCAGTGCTTCCTCCTGTTGAGAATGAGAATAGGGTGTTAGACCCGAAGAAATCACAAAACATAGCTATACTCTTGAGGGCACTGAATGTGACCAGAGATGAGGTGTCTGAAGCTCTTCTAGATGGGAATCCTGAAAGCTTGGGTGCTGAGCTATTGGAAACTCTTGTCAAGATGGCTCCAACTAAGGAGGAAGAGATAAAACTTAAAAACTATGATGGCGACCTCTCAAAACTTGGGTCCGCCGAAAGATTTCTTAAAACAGTGCTTGATATCCCTTTAGCCTTTAAAAGAGTTGAAGCCATGCTTTATAGAGCTAATTTTGAAGCAGAAGTTAACTACCTTAAGAAGTCTTTTCAAACCCTGGAGGTAGCAAGTGAAGAATTAAAGAATAGCCGGTTATTCCTCAAACTCCTTGAAGCTGTTCTCAGGACAGGAAACAGAATGAATGTTGGCACCAATCGCGGTGATGCTAAATCTTTCAAACTGGAAACACTCCTAAAACTTGTAGATATAAAGGGAACCGATGGAAAGACCACATTGCTCCACTTTGTGGTCCAAGAGATCATTAGATCTGAAGGTTCATGTGATGAATCTGCAAACGAGAATTCTCAAAACCAAATGAGTTCCAAATTCAATGAGGATGAGTTCAAAAAGAAAGGATTGCAGGTTGTATCTGGACTGAGTAAAGACCTTGGTAACGTAAAAAAAGCAGCAGGAATGGACTCGGATGTCTTAAGCAGTTATCTCTCAAAGCTTGAAATGGGACTTGATAAAGTGAGATTGGTTTTGCAATATCAGAGTCCAAATATGCAAGGGAATTTCTTTAACTCGACAAACATATTTCTGAACGATGCTGAAGAGAAAATTGCTAGGATCAAGGCGGATGAGAAAAAGGCCTTATTCCTTGTGAAAGAAGTTACAGAGTACTTTCATGGGGATACAGCAAAGGAAGAAGCACACCCTTTCAGAGTTTTTATGATTGTAAGAGACTTTTTAAATATTTTGGATCAAGTTTGCAAAGAAGTTGGAAGGATACAGGATAGAACTGTGATTGGTTCAGCCAGATCTTTCCAGATAGCTGCAAGTGCATCGTTACCTGTTCTTAGCAGGTACCATGGAAGACATGATAGAAGTTCAGACGAAGAAAGCTCGTCCCCCTAG 2643 0.4476 MNSHHLIFSLLFPLFTAKVITIQLSTFNEYESHTSRRILHQPLFPVTSAPPPTIDSPPPPPPDTPTSRDIPFFNEYPIPPPPPLPEQQLPSTPAGAIATNPTGMQQTKPTKTVAIAISVGIVTLGMLSALAFFLYKYRTKHTVETTHKESENSHFVPESSNNSSQPPPQSSLLYIGTVEPNRSLLSEPDRTGNIENRSLYGKLGNSVKLSDRYRPSPELQPLPPLNKPSDENQLPPAASSSSSSDEESRYTRFHSPSLSHEEDSYYNTPVSSRRSYGDNGNPSAAIVAGAPVVPFSKRTSPKSRLLASSPDRRNIMIPSIKNSHQPPSISPAPPPLQPRRPKFSEPPPAPDLRHLHSEESMTSLHTPPPPPPPLPPPRRVMPRGKVWSPVRSAASSIAASRKQQQSWSPSQEGAASAYSTDNITKAASVETYDMDEGKPKLKALHWDKVRATSNRATVWDRLKSSSFQLNEDMMESLFGCNSTNSAPKEVVTRKSVLPPVENENRVLDPKKSQNIAILLRALNVTRDEVSEALLDGNPESLGAELLETLVKMAPTKEEEIKLKNYDGDLSKLGSAERFLKTVLDIPLAFKRVEAMLYRANFEAEVNYLKKSFQTLEVASEELKNSRLFLKLLEAVLRTGNRMNVGTNRGDAKSFKLETLLKLVDIKGTDGKTTLLHFVVQEIIRSEGSCDESANENSQNQMSSKFNEDEFKKKGLQVVSGLSKDLGNVKKAAGMDSDVLSSYLSKLEMGLDKVRLVLQYQSPNMQGNFFNSTNIFLNDAEEKIARIKADEKKALFLVKEVTEYFHGDTAKEEAHPFRVFMIVRDFLNILDQVCKEVGRIQDRTVIGSARSFQIAASASLPVLSRYHGRHDRSSDEESSSP 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1310 880 MobiDBLite consensus disorder prediction 346 360 - -
Lal15g1310 880 MobiDBLite consensus disorder prediction 146 173 - -
Lal15g1310 880 MobiDBLite consensus disorder prediction 47 67 - -
Lal15g1310 880 MobiDBLite consensus disorder prediction 364 382 - -
Lal15g1310 880 MobiDBLite consensus disorder prediction 155 173 - -
Lal15g1310 880 MobiDBLite consensus disorder prediction 393 419 - -
Lal15g1310 880 Pfam Formin Homology 2 Domain 435 829 IPR015425 -
Lal15g1310 880 MobiDBLite consensus disorder prediction 206 419 - -
Lal15g1310 880 PANTHER FORMIN-RELATED 12 880 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lal15g1310 880 SUPERFAMILY Formin homology 2 domain (FH2 domain) 367 841 - -
Lal15g1310 880 MobiDBLite consensus disorder prediction 260 279 - -
Lal15g1310 880 MobiDBLite consensus disorder prediction 232 246 - -
Lal15g1310 880 Gene3D Formin, FH2 domain 428 840 IPR042201 -
Lal15g1310 880 PANTHER FORMIN-LIKE PROTEIN 12 880 - -
Lal15g1310 880 ProSiteProfiles Formin homology-2 (FH2) domain profile. 431 855 IPR015425 -
Lal15g1310 880 SMART it6_source 431 844 IPR015425 -
Lal15g1310 880 MobiDBLite consensus disorder prediction 47 74 - -
Lal15g1310 880 MobiDBLite consensus disorder prediction 327 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1310 Lal-Chr15 15026419 15034156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1310 377 870 FH2 protein (formin) Gene Family AT5G67470 67.265 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1310 - - gmx:100803578 1018.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g1310 15 15026419 15034156 Lal15g1310 15 15026419 15034156 ECH
Lal16g0254 16 1523382 1528161 Lal15g1310 15 15026419 15034156 LSH
Lal15g1310 15 15026419 15034156 Lal23g1297 23 13964165 13968807 LSH
Lal15g1310 15 15026419 15034156 Lal16g1324 16 9397001 9402008 LSH
Lal16g0254 16 1523382 1528161 Lal15g1310 15 15026419 15034156 PCT
Lal15g1310 15 15026419 15034156 Lal15g1310 15 15026419 15034156 PCT
Lal15g1310 15 15026419 15034156 Lal16g1324 16 9397001 9402008 PCT
Lal23g1297 23 13964165 13968807 Lal15g1310 15 15026419 15034156 PCT
Lal15g1310 15 15026419 15034156 Lal16g0254 16 1523382 1528161 PCT
Lal15g1310 15 15026419 15034156 Lal23g1297 23 13964165 13968807 PCT
Lal16g1324 16 9397001 9402008 Lal15g1310 15 15026419 15034156 PCT