Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gma20g02206 | ATGGGTTGTGGTTCTGAGCATTTTATCATGATCTTCAACATCACCCTCTTGATGCTTCTATCATCACAAAGCACCCACATTTTGACTGTGGCTGGTTCTCTATTCAATGCAGTGGGAAGCTTCCAAGTTCATGGCCTACCCGAGATGTATTTCATTGAAGAGAATGATGAAAAGCAAGTTAAGAAAATCTCAGGAATAGATGAGAATGAAGAGAAGCAAGCTTTGATACTGGAAAAGTTTAGATCCTTGCTTGGACTCAAGAGCTTCCACACCAAAGTTCCATTCAATGGTGATTCGGAGTTTCTCTCTCCCTCACCTTCTCCATCACCTATCATTGAAGAAACTCAGGCTCCTTCTCCTTCTCCTCTTCCACACGTGCCCCATCATTCCCATCACCATCCACCACATCATAAGAATCTACCACTTCACCAAACTCATCATGAAGATAGAGGCAGGGCTAAGAGAATACTAATAGCTGTTCTTGTATCTGCTGGGGTTGCTACATTGCTTGGTGCTTGTGGCTTATTCTGGGTGTGGAGAAAATTCTCAAATCACACAAAGAAACCCAAAAGAACAATGCCACTATATAATAGCAAGAGCAAAGGAAGTGGAGGTGGTTATCAAAGTTCATCAAGCAAGGTGAGTTTAAACTCAGGACTAGATCTCTTTTATCTTAATGCCTTAGGCGAGGACATAGAGCAACACTCTTGCAGCTTGAAAAAGACTCGCAAGGATGGTTTAGAATACGATAATGTTAGTGGTTCTTCCGCGAAGGAAATAGCATCTGTTCATGAAGATGCAGAATCAGTGGAAGGTGAACTTGAATCTGGTGGAGGCAACTCTTCTTCTGGGGATAAAATTATCCCTGAAGATTGCCATTCATCAGACAATGAAAGTTTTCATTCCTTTGTTAATGATTCACACTCCAATGCCTCAGCTTGTAGTCTTAGTGACAAAAACTCTCTGTCCCGTCAAAATTCAACTTCTTTACCAAACCAATTTCCTAGTTCTCCACATAACTCAATGTCAAATATACAACTTCACCATTCACCAAATATTCCAAAAACATTCACTTCCCCTCCGCCTCCTCCTCCACCACCACCACCTCCACCATTGCGAATGCCATTATTTTCTTTGCATTCCCTTACTTCTTCATCTAGACTCTCCTCTCATTCCCCACTTTCTTTGACATCTAATAATTTATCATCTCCGGTAAATTCAGACACTTCTTCTGGTTCAAATCAAAGTCCAGAAAAGGAGTTGCCTTCTCCACATGGACCTTACCCTACACAATCTCCTCCCAACATTCCCCCACCACCATGTCCACCTCCATTTCTTAAAGGCAATAGTGCCAAAACCCCACCTCCTCCACCTTCTCAACTCCCTCAATTTACCCCTCTTGGTAAAGATGGTGCACCATTGCCAAAACTCAAACCACTTCACTGGGACAAAGTAAGAGCTGCACCAAACCGCACAATGGTTTGGGACAAGCTAAGATCAAGCTCATTCGAGTTGGATGAGGAAATGATCGAGTCTCTATTTGGTTACAATTTGCAAAATTCAATTAAGAATGACGAAACAAAGAGTAAAACACCGTCTCCAGGCAAGCATGTACTTGAGCCAAAACGCCTGCAGAACATAACTATACTCTCGAAAGCTCTGAATGCGACAGCTGAGCATGTCTGCGAGGCCTTAATGCAAGGTAAAGGGTTGTCGTTGCCCCAACTAGAGGCACTAGTGAAAATGGTACCCACCAAGGAAGAAGAGTCCAAGCTCTTCAATTATAAAGGTGACATCAATGAATTGGGGTCCGCCGAAAGGTTCGTGAGGGCAATGCTCGATGTGCCATTTGCCTTTCAAAGAGTAGAAGGCATGCTTTTCAGAGAGACATTTGACGATGAAGTAGTTCACCTCAAGAACTCATTTTCAATGCTTGAGGAAGCATGCAAGGAACTAAGATCAAGCAGGCTCTTCTTGAAGTTACTAGAGGCAGTGCTCAAAACGGGAAACCGAATGAACGTTGGAACAATCAGAGGAGGTGCTAGAGCATTTAAACTTGATGCACTTCTCAAGCTTGCAGATGTTAAGGGAACTGATGGTAAAACCACGTTGCTCCATTTTGTTGTTCAGGAGATTGTTCGTTCGGAAGGAATAAGAGTTTCAGATAGCATTATGGGGAAAATCAGCCAAAGAAGTAAGAACAGAACGGAGGAAGAGAAGGAAGAAGATTACAAAAGGATGGGATTAGAACTTGTTTCTGGTCTCAGCACTGAGTTATACAACGTGAAAAAAACAGCCACCATTGACTTGGACGTTCTTGCAAGCTCTGTGTCAACCCTATCAGAAGGAATGAAAAAGCTGCAACATCTAGTGGAGAAGGAGTTGCTTAAAAATGAAAGGAGCATGAACTTTGTGCAGTGTATGAAGTCATTCCTTAACTATGCTGATGGAAACTTGAAGGAGTTGCGAGGAGATGAGGATAGAGTGTTGGCACGTGTGAAAGAAATTACGGAGTATTTTCATGGGGATGTGAGCAAAGAAGATGGAAACCCTCTTAGGATATTTGTGATTGTGAGAGATTTTCTGGGGATGTTAGATAATGTGTGTAAAGAACTTAGAAGGTCTAAAGCTCCACGTAGCCCGAACCCTCTTGCTATGCTCCCTTTAGATAGATCATAG | 2679 | 0.4255 | MGCGSEHFIMIFNITLLMLLSSQSTHILTVAGSLFNAVGSFQVHGLPEMYFIEENDEKQVKKISGIDENEEKQALILEKFRSLLGLKSFHTKVPFNGDSEFLSPSPSPSPIIEETQAPSPSPLPHVPHHSHHHPPHHKNLPLHQTHHEDRGRAKRILIAVLVSAGVATLLGACGLFWVWRKFSNHTKKPKRTMPLYNSKSKGSGGGYQSSSSKVSLNSGLDLFYLNALGEDIEQHSCSLKKTRKDGLEYDNVSGSSAKEIASVHEDAESVEGELESGGGNSSSGDKIIPEDCHSSDNESFHSFVNDSHSNASACSLSDKNSLSRQNSTSLPNQFPSSPHNSMSNIQLHHSPNIPKTFTSPPPPPPPPPPPPLRMPLFSLHSLTSSSRLSSHSPLSLTSNNLSSPVNSDTSSGSNQSPEKELPSPHGPYPTQSPPNIPPPPCPPPFLKGNSAKTPPPPPSQLPQFTPLGKDGAPLPKLKPLHWDKVRAAPNRTMVWDKLRSSSFELDEEMIESLFGYNLQNSIKNDETKSKTPSPGKHVLEPKRLQNITILSKALNATAEHVCEALMQGKGLSLPQLEALVKMVPTKEEESKLFNYKGDINELGSAERFVRAMLDVPFAFQRVEGMLFRETFDDEVVHLKNSFSMLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTIRGGARAFKLDALLKLADVKGTDGKTTLLHFVVQEIVRSEGIRVSDSIMGKISQRSKNRTEEEKEEDYKRMGLELVSGLSTELYNVKKTATIDLDVLASSVSTLSEGMKKLQHLVEKELLKNERSMNFVQCMKSFLNYADGNLKELRGDEDRVLARVKEITEYFHGDVSKEDGNPLRIFVIVRDFLGMLDNVCKELRRSKAPRSPNPLAMLPLDRS | 892 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gma20g02206 | 892 | SMART | it6_source | 467 | 880 | IPR015425 | - | |
| Gma20g02206 | 892 | MobiDBLite | consensus disorder prediction | 316 | 341 | - | - | |
| Gma20g02206 | 892 | MobiDBLite | consensus disorder prediction | 382 | 420 | - | - | |
| Gma20g02206 | 892 | Pfam | Formin Homology 2 Domain | 471 | 865 | IPR015425 | - | |
| Gma20g02206 | 892 | MobiDBLite | consensus disorder prediction | 260 | 284 | - | - | |
| Gma20g02206 | 892 | MobiDBLite | consensus disorder prediction | 113 | 148 | - | - | |
| Gma20g02206 | 892 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 480 | 876 | - | - | |
| Gma20g02206 | 892 | PANTHER | FORMIN-LIKE PROTEIN | 361 | 886 | - | - | |
| Gma20g02206 | 892 | PANTHER | FORMIN-LIKE PROTEIN | 57 | 324 | - | - | |
| Gma20g02206 | 892 | Gene3D | Formin, FH2 domain | 490 | 881 | IPR042201 | - |
Showing 1 to 10 of 15 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gma20g02206 | - | - | gmx:100793761 | 1554.27 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gma20g02206 | 20 | 49158333 | 49161751 | Gma20g02206 | 20 | 49158333 | 49161751 | ECH | |
| Gma10g01500 | 10 | 42113646 | 42118568 | Gma20g02206 | 20 | 49158333 | 49161751 | GST | |
| Gma19g02215 | 19 | 50938669 | 50942554 | Gma20g02206 | 20 | 49158333 | 49161751 | PCT | |
| Gma03g02174 | 03 | 47190893 | 47193935 | Gma20g02206 | 20 | 49158333 | 49161751 | PCT |
Showing 1 to 4 of 4 entries