Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g02206 ATGGGTTGTGGTTCTGAGCATTTTATCATGATCTTCAACATCACCCTCTTGATGCTTCTATCATCACAAAGCACCCACATTTTGACTGTGGCTGGTTCTCTATTCAATGCAGTGGGAAGCTTCCAAGTTCATGGCCTACCCGAGATGTATTTCATTGAAGAGAATGATGAAAAGCAAGTTAAGAAAATCTCAGGAATAGATGAGAATGAAGAGAAGCAAGCTTTGATACTGGAAAAGTTTAGATCCTTGCTTGGACTCAAGAGCTTCCACACCAAAGTTCCATTCAATGGTGATTCGGAGTTTCTCTCTCCCTCACCTTCTCCATCACCTATCATTGAAGAAACTCAGGCTCCTTCTCCTTCTCCTCTTCCACACGTGCCCCATCATTCCCATCACCATCCACCACATCATAAGAATCTACCACTTCACCAAACTCATCATGAAGATAGAGGCAGGGCTAAGAGAATACTAATAGCTGTTCTTGTATCTGCTGGGGTTGCTACATTGCTTGGTGCTTGTGGCTTATTCTGGGTGTGGAGAAAATTCTCAAATCACACAAAGAAACCCAAAAGAACAATGCCACTATATAATAGCAAGAGCAAAGGAAGTGGAGGTGGTTATCAAAGTTCATCAAGCAAGGTGAGTTTAAACTCAGGACTAGATCTCTTTTATCTTAATGCCTTAGGCGAGGACATAGAGCAACACTCTTGCAGCTTGAAAAAGACTCGCAAGGATGGTTTAGAATACGATAATGTTAGTGGTTCTTCCGCGAAGGAAATAGCATCTGTTCATGAAGATGCAGAATCAGTGGAAGGTGAACTTGAATCTGGTGGAGGCAACTCTTCTTCTGGGGATAAAATTATCCCTGAAGATTGCCATTCATCAGACAATGAAAGTTTTCATTCCTTTGTTAATGATTCACACTCCAATGCCTCAGCTTGTAGTCTTAGTGACAAAAACTCTCTGTCCCGTCAAAATTCAACTTCTTTACCAAACCAATTTCCTAGTTCTCCACATAACTCAATGTCAAATATACAACTTCACCATTCACCAAATATTCCAAAAACATTCACTTCCCCTCCGCCTCCTCCTCCACCACCACCACCTCCACCATTGCGAATGCCATTATTTTCTTTGCATTCCCTTACTTCTTCATCTAGACTCTCCTCTCATTCCCCACTTTCTTTGACATCTAATAATTTATCATCTCCGGTAAATTCAGACACTTCTTCTGGTTCAAATCAAAGTCCAGAAAAGGAGTTGCCTTCTCCACATGGACCTTACCCTACACAATCTCCTCCCAACATTCCCCCACCACCATGTCCACCTCCATTTCTTAAAGGCAATAGTGCCAAAACCCCACCTCCTCCACCTTCTCAACTCCCTCAATTTACCCCTCTTGGTAAAGATGGTGCACCATTGCCAAAACTCAAACCACTTCACTGGGACAAAGTAAGAGCTGCACCAAACCGCACAATGGTTTGGGACAAGCTAAGATCAAGCTCATTCGAGTTGGATGAGGAAATGATCGAGTCTCTATTTGGTTACAATTTGCAAAATTCAATTAAGAATGACGAAACAAAGAGTAAAACACCGTCTCCAGGCAAGCATGTACTTGAGCCAAAACGCCTGCAGAACATAACTATACTCTCGAAAGCTCTGAATGCGACAGCTGAGCATGTCTGCGAGGCCTTAATGCAAGGTAAAGGGTTGTCGTTGCCCCAACTAGAGGCACTAGTGAAAATGGTACCCACCAAGGAAGAAGAGTCCAAGCTCTTCAATTATAAAGGTGACATCAATGAATTGGGGTCCGCCGAAAGGTTCGTGAGGGCAATGCTCGATGTGCCATTTGCCTTTCAAAGAGTAGAAGGCATGCTTTTCAGAGAGACATTTGACGATGAAGTAGTTCACCTCAAGAACTCATTTTCAATGCTTGAGGAAGCATGCAAGGAACTAAGATCAAGCAGGCTCTTCTTGAAGTTACTAGAGGCAGTGCTCAAAACGGGAAACCGAATGAACGTTGGAACAATCAGAGGAGGTGCTAGAGCATTTAAACTTGATGCACTTCTCAAGCTTGCAGATGTTAAGGGAACTGATGGTAAAACCACGTTGCTCCATTTTGTTGTTCAGGAGATTGTTCGTTCGGAAGGAATAAGAGTTTCAGATAGCATTATGGGGAAAATCAGCCAAAGAAGTAAGAACAGAACGGAGGAAGAGAAGGAAGAAGATTACAAAAGGATGGGATTAGAACTTGTTTCTGGTCTCAGCACTGAGTTATACAACGTGAAAAAAACAGCCACCATTGACTTGGACGTTCTTGCAAGCTCTGTGTCAACCCTATCAGAAGGAATGAAAAAGCTGCAACATCTAGTGGAGAAGGAGTTGCTTAAAAATGAAAGGAGCATGAACTTTGTGCAGTGTATGAAGTCATTCCTTAACTATGCTGATGGAAACTTGAAGGAGTTGCGAGGAGATGAGGATAGAGTGTTGGCACGTGTGAAAGAAATTACGGAGTATTTTCATGGGGATGTGAGCAAAGAAGATGGAAACCCTCTTAGGATATTTGTGATTGTGAGAGATTTTCTGGGGATGTTAGATAATGTGTGTAAAGAACTTAGAAGGTCTAAAGCTCCACGTAGCCCGAACCCTCTTGCTATGCTCCCTTTAGATAGATCATAG 2679 0.4255 MGCGSEHFIMIFNITLLMLLSSQSTHILTVAGSLFNAVGSFQVHGLPEMYFIEENDEKQVKKISGIDENEEKQALILEKFRSLLGLKSFHTKVPFNGDSEFLSPSPSPSPIIEETQAPSPSPLPHVPHHSHHHPPHHKNLPLHQTHHEDRGRAKRILIAVLVSAGVATLLGACGLFWVWRKFSNHTKKPKRTMPLYNSKSKGSGGGYQSSSSKVSLNSGLDLFYLNALGEDIEQHSCSLKKTRKDGLEYDNVSGSSAKEIASVHEDAESVEGELESGGGNSSSGDKIIPEDCHSSDNESFHSFVNDSHSNASACSLSDKNSLSRQNSTSLPNQFPSSPHNSMSNIQLHHSPNIPKTFTSPPPPPPPPPPPPLRMPLFSLHSLTSSSRLSSHSPLSLTSNNLSSPVNSDTSSGSNQSPEKELPSPHGPYPTQSPPNIPPPPCPPPFLKGNSAKTPPPPPSQLPQFTPLGKDGAPLPKLKPLHWDKVRAAPNRTMVWDKLRSSSFELDEEMIESLFGYNLQNSIKNDETKSKTPSPGKHVLEPKRLQNITILSKALNATAEHVCEALMQGKGLSLPQLEALVKMVPTKEEESKLFNYKGDINELGSAERFVRAMLDVPFAFQRVEGMLFRETFDDEVVHLKNSFSMLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTIRGGARAFKLDALLKLADVKGTDGKTTLLHFVVQEIVRSEGIRVSDSIMGKISQRSKNRTEEEKEEDYKRMGLELVSGLSTELYNVKKTATIDLDVLASSVSTLSEGMKKLQHLVEKELLKNERSMNFVQCMKSFLNYADGNLKELRGDEDRVLARVKEITEYFHGDVSKEDGNPLRIFVIVRDFLGMLDNVCKELRRSKAPRSPNPLAMLPLDRS 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g02206 892 SMART it6_source 467 880 IPR015425 -
Gma20g02206 892 MobiDBLite consensus disorder prediction 316 341 - -
Gma20g02206 892 MobiDBLite consensus disorder prediction 382 420 - -
Gma20g02206 892 Pfam Formin Homology 2 Domain 471 865 IPR015425 -
Gma20g02206 892 MobiDBLite consensus disorder prediction 260 284 - -
Gma20g02206 892 MobiDBLite consensus disorder prediction 113 148 - -
Gma20g02206 892 SUPERFAMILY Formin homology 2 domain (FH2 domain) 480 876 - -
Gma20g02206 892 PANTHER FORMIN-LIKE PROTEIN 361 886 - -
Gma20g02206 892 PANTHER FORMIN-LIKE PROTEIN 57 324 - -
Gma20g02206 892 Gene3D Formin, FH2 domain 490 881 IPR042201 -
Gma20g02206 892 MobiDBLite consensus disorder prediction 126 140 - -
Gma20g02206 892 MobiDBLite consensus disorder prediction 382 432 - -
Gma20g02206 892 PANTHER FORMIN-RELATED 361 886 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gma20g02206 892 PANTHER FORMIN-RELATED 57 324 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gma20g02206 892 ProSiteProfiles Formin homology-2 (FH2) domain profile. 467 891 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g02206 Gma-Chr20 49158333 49161751 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g02206 142 885 FH2 protein (formin) Gene Family AT3G05470 53.954 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g02206 - - gmx:100793761 1554.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g02206 20 49158333 49161751 Gma20g02206 20 49158333 49161751 ECH
Gma10g01500 10 42113646 42118568 Gma20g02206 20 49158333 49161751 GST
Gma19g02215 19 50938669 50942554 Gma20g02206 20 49158333 49161751 PCT
Gma03g02174 03 47190893 47193935 Gma20g02206 20 49158333 49161751 PCT