Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01793 ATGGCTTTCCCAATTCTCTTCCTTCTCTTCATTTCCCTTCCCTTCTCCTCCGCAAAGCTCAACGTCGATTACTACAAAAACACATGCCCAGACTTCGAAAAAATCGTTAGGGAAAACGTCTTCACCAAACAAAGCGCTAGCGTGGccacagcaccgggtctccttcgcctcttcttccacgattgcatcaccgatggctgcgacgcttccctcctcataacttccaatgcatacaaccctcatgcagaacgtgatgcggacctcaacctttctctctccggTGATGCCTTCGACATCATAGTTAAAATCAAAAACGCATTAGAACTTGCATGCCCTGGTGTTGTGTCGTGTTCCGACATCGTGGCACAGGCCACAAGAGACCTTGTTAAGATGGTCGGTGGTCCTTTTTACCCCGTGAGGCTGGGGAGAAAGGATAGCACTGAATCAGATGCTGCGAGAGTGAGTGCAAGCCTTCCAACACCAAGCATGACCATGGACCAGATCATTGAGAAGTTTACCTCAAAGGGTTTCACTGTTAAGGAGATGGTGGCTTTGACTGGGGCACACACCATTGGGTTCACACACTGCAAGGAGTTCATCCACAGGATCTACAACTTCAGCAAGACCTCTGATGCTGACCCTATGATGCACCCTAAGCTGGTCCAAGGGTTGAGGTCCGTGTGCCAGAACTACACCAAGGACTCCTCAATGGCTGCATTCAATGATGTTAGGTCACCAGGGAAGTTTGACAATGCCTACTACCAGAATGTCATCAAGGGTTTGGGGTTGTTGACCTCTGATTCCATTCTTGCTGTTGACCCTAGGACAAAGCCTCTTGTGGAGCTCTATGCAAATGACCAGCAAGCTTTCTTCAAGGACTTTGCTGATGCCATGGAGAAACTTTCTGTGTTTAGAGTCAAAACTGGCGACAAAGGAGAGTGTTTTGTGTGTGATCCATCTCTTGAATCCTCAAACCATTGGGTTACGGATAGGTTACTTGGGGGAAGAagtggcggtggcggtggcggcggtggcagtggcggaggaggtggcggtggtggTAGTCTTGGACGTGGTTCCGGGTATGGATCAGGGTATGGCTCGGGTGAGGGTGAAGGGTACGGTGGAGGATCACTAGGAGGAGGCGGGGGTGGCGGTGGAGGCAGAGGAGGAGGTGGCGGTGGCGGTGGTGCTACGGGAGGTTCGgggtacgggtccggatatgggtcagggtatggatccggatacgggtcTGGTGGTGGTGCGAATGGTGGCGGTGGTGGAGGAGGTGGAGGCAAAGGTGGTGGAGGCGGAGGTGGAGGTTCTAATGGTTCAGGGTATGGCTCAGGCTCTGGATACGGTGAAGGAGGTGGTTATGGTCAAGGAGGTGGAAATGGAGGACgaggcggtggcggtggtggaggaggaggtggaggtggtggcggcggcggtggTAGTGGAGGTTCTGGTTATGGTAGTGGCTCTGGGTATGGGTCTGGTTGGGGTGGGGGAGGAAATTATGAGTCCCCTTAA 1533 0.4149 MAFPILFLLFISLPFSSAKLNVDYYKNTCPDFEKIVRENVFTKQSASVATAPGLLRLFFHDCITDGCDASLLITSNAYNPHAERDADLNLSLSGDAFDIIVKIKNALELACPGVVSCSDIVAQATRDLVKMVGGPFYPVRLGRKDSTESDAARVSASLPTPSMTMDQIIEKFTSKGFTVKEMVALTGAHTIGFTHCKEFIHRIYNFSKTSDADPMMHPKLVQGLRSVCQNYTKDSSMAAFNDVRSPGKFDNAYYQNVIKGLGLLTSDSILAVDPRTKPLVELYANDQQAFFKDFADAMEKLSVFRVKTGDKGECFVCDPSLESSNHWVTDRLLGGRSGGGGGGGGSGGGGGGGGSLGRGSGYGSGYGSGEGEGYGGGSLGGGGGGGGGRGGGGGGGGATGGSGYGSGYGSGYGSGYGSGGGANGGGGGGGGGKGGGGGGGGSNGSGYGSGSGYGEGGGYGQGGGNGGRGGGGGGGGGGGGGGGGGSGGSGYGSGSGYGSGWGGGGNYESP 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01793 510 ProSiteProfiles Plant heme peroxidase family profile. 19 313 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma20g01793 510 MobiDBLite consensus disorder prediction 332 352 - -
Gma20g01793 510 MobiDBLite consensus disorder prediction 453 510 - -
Gma20g01793 510 PRINTS Plant peroxidase signature 180 192 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma20g01793 510 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma20g01793 510 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma20g01793 510 PRINTS Plant peroxidase signature 29 48 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma20g01793 510 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma20g01793 510 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma20g01793 510 PRINTS Plant peroxidase signature 53 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma20g01793 510 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma20g01793 510 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma20g01793 510 CDD secretory_peroxidase 19 313 IPR033905 GO:0004601|GO:0042744
Gma20g01793 510 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma20g01793 510 PRINTS Haem peroxidase superfamily signature 51 65 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma20g01793 510 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma20g01793 510 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma20g01793 510 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma20g01793 510 Gene3D - 23 313 - -
Gma20g01793 510 PANTHER - 5 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma20g01793 510 SUPERFAMILY Heme-dependent peroxidases 20 315 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gma20g01793 510 PANTHER PEROXIDASE 41 5 314 - -
Gma20g01793 510 Pfam Peroxidase 45 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma20g01793 510 Gene3D Peroxidase, domain 2 159 301 - -
Gma20g01793 510 ProSitePatterns Peroxidases proximal heme-ligand signature. 181 191 IPR019793 -
Gma20g01793 510 ProSitePatterns Peroxidases active site signature. 51 62 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01793 Gma-Chr20 45325582 45335266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01793 3 301 Peroxidase AT5G47000 57.947 9.23e-120 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01793 K00430 - gmx:100795676 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01915 10 46326595 46327836 Gma20g01793 20 45325582 45335266 GST