LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma20g01793	ATGGCTTTCCCAATTCTCTTCCTTCTCTTCATTTCCCTTCCCTTCTCCTCCGCAAAGCTCAACGTCGATTACTACAAAAACACATGCCCAGACTTCGAAAAAATCGTTAGGGAAAACGTCTTCACCAAACAAAGCGCTAGCGTGGccacagcaccgggtctccttcgcctcttcttccacgattgcatcaccgatggctgcgacgcttccctcctcataacttccaatgcatacaaccctcatgcagaacgtgatgcggacctcaacctttctctctccggTGATGCCTTCGACATCATAGTTAAAATCAAAAACGCATTAGAACTTGCATGCCCTGGTGTTGTGTCGTGTTCCGACATCGTGGCACAGGCCACAAGAGACCTTGTTAAGATGGTCGGTGGTCCTTTTTACCCCGTGAGGCTGGGGAGAAAGGATAGCACTGAATCAGATGCTGCGAGAGTGAGTGCAAGCCTTCCAACACCAAGCATGACCATGGACCAGATCATTGAGAAGTTTACCTCAAAGGGTTTCACTGTTAAGGAGATGGTGGCTTTGACTGGGGCACACACCATTGGGTTCACACACTGCAAGGAGTTCATCCACAGGATCTACAACTTCAGCAAGACCTCTGATGCTGACCCTATGATGCACCCTAAGCTGGTCCAAGGGTTGAGGTCCGTGTGCCAGAACTACACCAAGGACTCCTCAATGGCTGCATTCAATGATGTTAGGTCACCAGGGAAGTTTGACAATGCCTACTACCAGAATGTCATCAAGGGTTTGGGGTTGTTGACCTCTGATTCCATTCTTGCTGTTGACCCTAGGACAAAGCCTCTTGTGGAGCTCTATGCAAATGACCAGCAAGCTTTCTTCAAGGACTTTGCTGATGCCATGGAGAAACTTTCTGTGTTTAGAGTCAAAACTGGCGACAAAGGAGAGTGTTTTGTGTGTGATCCATCTCTTGAATCCTCAAACCATTGGGTTACGGATAGGTTACTTGGGGGAAGAagtggcggtggcggtggcggcggtggcagtggcggaggaggtggcggtggtggTAGTCTTGGACGTGGTTCCGGGTATGGATCAGGGTATGGCTCGGGTGAGGGTGAAGGGTACGGTGGAGGATCACTAGGAGGAGGCGGGGGTGGCGGTGGAGGCAGAGGAGGAGGTGGCGGTGGCGGTGGTGCTACGGGAGGTTCGgggtacgggtccggatatgggtcagggtatggatccggatacgggtcTGGTGGTGGTGCGAATGGTGGCGGTGGTGGAGGAGGTGGAGGCAAAGGTGGTGGAGGCGGAGGTGGAGGTTCTAATGGTTCAGGGTATGGCTCAGGCTCTGGATACGGTGAAGGAGGTGGTTATGGTCAAGGAGGTGGAAATGGAGGACgaggcggtggcggtggtggaggaggaggtggaggtggtggcggcggcggtggTAGTGGAGGTTCTGGTTATGGTAGTGGCTCTGGGTATGGGTCTGGTTGGGGTGGGGGAGGAAATTATGAGTCCCCTTAA	1533	0.4149	MAFPILFLLFISLPFSSAKLNVDYYKNTCPDFEKIVRENVFTKQSASVATAPGLLRLFFHDCITDGCDASLLITSNAYNPHAERDADLNLSLSGDAFDIIVKIKNALELACPGVVSCSDIVAQATRDLVKMVGGPFYPVRLGRKDSTESDAARVSASLPTPSMTMDQIIEKFTSKGFTVKEMVALTGAHTIGFTHCKEFIHRIYNFSKTSDADPMMHPKLVQGLRSVCQNYTKDSSMAAFNDVRSPGKFDNAYYQNVIKGLGLLTSDSILAVDPRTKPLVELYANDQQAFFKDFADAMEKLSVFRVKTGDKGECFVCDPSLESSNHWVTDRLLGGRSGGGGGGGGSGGGGGGGGSLGRGSGYGSGYGSGEGEGYGGGSLGGGGGGGGGRGGGGGGGGATGGSGYGSGYGSGYGSGYGSGGGANGGGGGGGGGKGGGGGGGGSNGSGYGSGSGYGEGGGYGQGGGNGGRGGGGGGGGGGGGGGGGGSGGSGYGSGSGYGSGWGGGGNYESP	510

Showing 1 to 1 of 1 entries

Previous1Next

Annotation information

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Gma20g01793	510	ProSiteProfiles	Plant heme peroxidase family profile.	19	313	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Gma20g01793	510	MobiDBLite	consensus disorder prediction	332	352	-	-
Gma20g01793	510	MobiDBLite	consensus disorder prediction	453	510	-	-
Gma20g01793	510	PRINTS	Plant peroxidase signature	180	192	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Gma20g01793	510	PRINTS	Plant peroxidase signature	114	124	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Gma20g01793	510	PRINTS	Plant peroxidase signature	240	255	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Gma20g01793	510	PRINTS	Plant peroxidase signature	29	48	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Gma20g01793	510	PRINTS	Plant peroxidase signature	296	309	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Gma20g01793	510	PRINTS	Plant peroxidase signature	133	148	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Gma20g01793	510	PRINTS	Plant peroxidase signature	53	73	IPR000823	GO:0004601\|GO:0006979\|GO:0020037

Showing 1 to 10 of 26 entries

Previous1 2 3Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma20g01793	Gma-Chr20	45325582	45335266	Dispersed/Wgd

Showing 1 to 1 of 1 entries

Previous1Next

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma20g01793	3	301	Peroxidase	AT5G47000	57.947	9.23e-120	353

Showing 1 to 1 of 1 entries

Previous1Next

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma20g01793	K00430		-	gmx:100795676	613.609

Showing 1 to 1 of 1 entries

Previous1Next

Event-related genes

Show entries

Search:

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma10g01915	10	46326595	46327836	Gma20g01793	20	45325582	45335266	GST

Showing 1 to 1 of 1 entries

Previous1Next