Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01473 ATGGTATATATGATAGACAGAGTATTCATTCTCGTATTCTTTTATACATTCTTAATCAGCATAATGTCTTTGGACTCCTCATCAAACCACCCAATTATTCCTGACTTGTATTGCAGTGAAGTAACAAGCGAAGTGATTCACTTGGATTCCGATGATGAGGCTATGAAGTTGAATGTTCTATGGGGAGACTCTGATCATGATGATAGTGATGAAAGCATTCTATTGAGCTTGTTAGAATCCGAACACGACCAAGTGCAGGAACAAACAAAGTCCCTAGGACAACAACTTCGCAAAAAAACATGGCTGATTAATGCTCGAGAAGAGGCCATAAATTGGATCCTAAAGGTGCATGCTTACTACAGTTTCAAACCCGAGACAGCATATCTTTCTGTAGATTACTTCAATCGTTTTCTCTTGTCACACACCTTGACGCCAGATAAAGCATGGCCTCTGCAGCTGTTATCAGTGGCTTGTCTTGCTCTAGCAGCAAAAATGGAAGAAAGAAAAGTGCCACTTCTTTTGGACCTGCAAGTGATCGAGTCAAGGTTCTTGTTTAAGCCCAAAACAGTTCAGAGGATGGAGCTTTTGGTTATGGCCAGTCTCAAGTGGCGATTGCGCACTATAACCCCTTTTGATTTTGTTCACCTTTTCATTGCCAAGCTTCCGTGCTCTGCTTCCACATGGAGAGATTTAAGTTACATTGTTTCTCGTGTCTCCGATGTTATCATCAGAACATGTCTAGTCATGGATTTCTTGGAGTTTTCACCATCCACAATAGCAGCAGCTGCACTGTTATGGGTAACAAATCAATGTGCAGATGAGAAGAAATCAGAGTGCTTCCACAAGAATATAGGCATTGAGATGGTGCAGAAATGTTACAAACTAATGAAGCAGAAACTGATAATTCGTCGATCAGGACTATATTGGCCAAAGACTTTACAATTATTGCCCCGAAGTCCCACTTGTGTGCTTGATCATGCAGCAGCTATGCAAGAAAGCAGCGATGCCCATCACAAGCTCTGA 1023 0.4154 MVYMIDRVFILVFFYTFLISIMSLDSSSNHPIIPDLYCSEVTSEVIHLDSDDEAMKLNVLWGDSDHDDSDESILLSLLESEHDQVQEQTKSLGQQLRKKTWLINAREEAINWILKVHAYYSFKPETAYLSVDYFNRFLLSHTLTPDKAWPLQLLSVACLALAAKMEERKVPLLLDLQVIESRFLFKPKTVQRMELLVMASLKWRLRTITPFDFVHLFIAKLPCSASTWRDLSYIVSRVSDVIIRTCLVMDFLEFSPSTIAAAALLWVTNQCADEKKSECFHKNIGIEMVQKCYKLMKQKLIIRRSGLYWPKTLQLLPRSPTCVLDHAAAMQESSDAHHKL 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01473 340 Coils Coil 75 95 - -
Gma17g01473 340 CDD CYCLIN 106 198 IPR013763 -
Gma17g01473 340 Pfam Cyclin, C-terminal domain 208 300 IPR004367 -
Gma17g01473 340 PANTHER CYCLINS 26 331 IPR039361 -
Gma17g01473 340 SMART Cyclin_C_2 208 333 IPR004367 -
Gma17g01473 340 Pfam Cyclin, N-terminal domain 76 205 IPR006671 -
Gma17g01473 340 SUPERFAMILY Cyclin-like 70 205 IPR036915 -
Gma17g01473 340 PANTHER CYCLIN-D1-1-LIKE ISOFORM X1 26 331 - -
Gma17g01473 340 Gene3D - 77 293 - -
Gma17g01473 340 Gene3D - 87 206 - -
Gma17g01473 340 SUPERFAMILY Cyclin-like 190 305 IPR036915 -
Gma17g01473 340 SMART cyclin_7 111 199 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01473 Gma-Chr17 14068836 14070380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01473 35 316 Core Cell Cycle Gene Families AT1G70210 38.176 3.73e-56 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01473 K18810 - gmx:100799323 619.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01473 17 14068836 14070380 Gma05g01078 05 30811802 30813474 GST