Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00605 ATGGAGTATGAAGATGAAGATTGGCTTTGTGTCACTATGGATGAGTTTTCTCTTGCTACTGAAAATGGTTTTAGCAGGCAAATGATGAGTAGGAAGAGGAACTATGATGATGACACAAGAGAATACAAATCAAAGAACCTTGAGACTGAAAGGAGGAGGAGGGAGAAGCTCAGTAGCAGGCTTTTGATGCTGCGGTCTATGATGAATAAAGCAACAATTGTTGAAGATGCTATCACCTACATTGAGAAGCTGCAAGACAAAGTCCAGAATCTCAGCCAAGAGCTACACCAAATGGAAGCAACTTCAGTGGAAACGGCAGAGACAAAAATAGTTGAAATTGATGCTGTGGAAGATATGAAGAATTGGGGGATACAGGAAGAGGTCAGAGTGGCGCAAATAAACGAGAATAAACTCTGGGTTAAGATCATTATTGAGAAGAAGAGGGGAAGATTCAACAGATTGATGCAGGCCCTCAATAATTTTGGCATTGAGCTTATTGACACCAATCTCACAACCACCAAAGGATCATTTCTGATTACAAGCTGCATAAAGATGAATAGAGGAACAATTATTGTAGATGCTATCACCTACATTGAGAAGCTGCAACACGAAGTCCAGCGTCTGAGCCAAGAGCTTCACCAATTGGAAGCAACTTCAGAGAAAACAGCAGAGGCAAAAGTAGATGAAATTGATGCTGTGGAGGATATGAAGCATTGGGGGATACAGGCTGAGGTCAGAGTGGCACAGATAGATGAGAATAAACTCTGGGTCAAGATCATCATTGAGAAGAAGAGGGGAAGATTCAGCAAATTAATGGAGGCCCTCAATAATTTTGGCATTGAGCTAATTGACACCAATTTTACAACCACAAAAGGTGCATTTCTGATTACAAGCTGCATACAGGTTAAGGATGGTGAAAGACTTGAAATTCATCAAAGCAAGAGTTTGTTGCAAGAGATTATCAATGACATATCAAGCAAGTCCGAATAG 990 0.4071 MEYEDEDWLCVTMDEFSLATENGFSRQMMSRKRNYDDDTREYKSKNLETERRRREKLSSRLLMLRSMMNKATIVEDAITYIEKLQDKVQNLSQELHQMEATSVETAETKIVEIDAVEDMKNWGIQEEVRVAQINENKLWVKIIIEKKRGRFNRLMQALNNFGIELIDTNLTTTKGSFLITSCIKMNRGTIIVDAITYIEKLQHEVQRLSQELHQLEATSEKTAEAKVDEIDAVEDMKHWGIQAEVRVAQIDENKLWVKIIIEKKRGRFSKLMEALNNFGIELIDTNFTTTKGAFLITSCIQVKDGERLEIHQSKSLLQEIINDISSKSE 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00605 329 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 184 324 - -
Gma15g00605 329 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 9 184 - -
Gma15g00605 329 Gene3D - 150 223 IPR036638 GO:0046983
Gma15g00605 329 PANTHER TRANSCRIPTION FACTOR DYT1 184 324 - -
Gma15g00605 329 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 38 100 IPR036638 GO:0046983
Gma15g00605 329 SMART finulus 47 90 IPR011598 GO:0046983
Gma15g00605 329 SMART finulus 142 207 IPR011598 GO:0046983
Gma15g00605 329 MobiDBLite consensus disorder prediction 30 51 - -
Gma15g00605 329 Coils Coil 74 101 - -
Gma15g00605 329 Gene3D - 38 108 IPR036638 GO:0046983
Gma15g00605 329 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 135 216 IPR036638 GO:0046983
Gma15g00605 329 Coils Coil 191 225 - -
Gma15g00605 329 PANTHER TRANSCRIPTION FACTOR DYT1 9 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00605 Gma-Chr15 4955343 4959918 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00605 185 321 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G21330 36.552 1.92e-25 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma15g00605 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00605 - - vun:114186874 497.664