Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00171 ATGTCTAGAGCATTGGAACATGATTACATAGGGTTGGCAGAGAATCCGTCAATGGACGGAAGCTCTGACAAACTGTCTTCTGAGGATGGTAAAACCTCATCACTGAACTTGAAGGAGACAGAGCTGAGGCTTGGCCTCCCTGGTTGCGAGTCTCCAGAGAGAAAATCAGGTTCTGCACTCTGTCTTTTTGGCAAAGAGTTGCAGAACAATAACAATGTTTGCTCAGTTGTAAGCCCTTTGAAGGCTGGGGCCAAGAGGGGCTTCTCTGATGTCACTGAGGGATCTCAAGGAGCTGCTTTGTTCTCTCCAAGAGGGGCCAATGTTGGGAAACCTATTATTGGTTTAGACACTCAAACTAACACCCAACAACAGGCTAACACCACCATCAAAGAGGTTGGTGCAGTTCTTCCTCAATCTACTAAACCGGTTCAGGAAAAGAATGATCAGGTTGCTGCAACAAATGGCCATGCAAGTGCTCCTGCTGCTAAGGCACAAGTTGTGGGATGGCCACCAATTCGATCTTTCCGAAAGAACACTATGGCCTCTAATTTGACAAAGAACAATGATGACGATGAGGGAAAATCAGGATTTGGTTGTCTCTATGTAAAAGTCAGTATGGATGGTGCCCCTTATCTTAGAAAGGTTGATCTCAAAACATATAACAACTATATGGAACTTTCCTCAGCCCTTGAGAAGATGTTCAGCTGCTTTACCATTGGTCAATGCAATTCTCCTGGACTTCCTGGGAAAGATGGACTAAGTGAGAGCTCTTTGAGGGATCTTCTCCATGGATCTGAATATGTTCTTACATATGAAGACAAAGATGGAGATTGGATGCTTGTGGGTGATGTTCCTTGGGAGATGTTCACTGATTCATGTCGGAGACTAAGGATCATGAAAGGCTCTGAGGCAATTGGGCTAGCTCCAAGGGCCATGGAAAAATCTAGGAGCCAAAACTAA 960 0.449 MSRALEHDYIGLAENPSMDGSSDKLSSEDGKTSSLNLKETELRLGLPGCESPERKSGSALCLFGKELQNNNNVCSVVSPLKAGAKRGFSDVTEGSQGAALFSPRGANVGKPIIGLDTQTNTQQQANTTIKEVGAVLPQSTKPVQEKNDQVAATNGHASAPAAKAQVVGWPPIRSFRKNTMASNLTKNNDDDEGKSGFGCLYVKVSMDGAPYLRKVDLKTYNNYMELSSALEKMFSCFTIGQCNSPGLPGKDGLSESSLRDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDSCRRLRIMKGSEAIGLAPRAMEKSRSQN 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00171 319 MobiDBLite consensus disorder prediction 1 35 - -
Gma15g00171 319 PANTHER AUXIN-RESPONSIVE PROTEIN 4 311 - -
Gma15g00171 319 Gene3D - 194 313 - -
Gma15g00171 319 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 4 311 IPR003311 GO:0005634|GO:0006355
Gma15g00171 319 ProSiteProfiles PB1 domain profile. 199 301 IPR000270 GO:0005515
Gma15g00171 319 SUPERFAMILY CAD & PB1 domains 199 300 - -
Gma15g00171 319 MobiDBLite consensus disorder prediction 19 35 - -
Gma15g00171 319 Pfam AUX/IAA family 39 310 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00171 Gma-Chr15 1389088 1391994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00171 201 313 B3 DNA Binding Superfamily AT1G19850 32.174 3.92e-08 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Gma15g00171 AUX_IAA 3.3e-92 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00171 K14484 - gmx:100804423 637.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00171 15 1389088 1391994 Gma15g00171 15 1389088 1391994 ECH