Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01806 ATGTTCTCAAAGCTACACTCACAACACTCACAACAGCCTCAACCTTTTCAATTCTCTCGGGAATATCAATCCTCTAAAGAGGATGATATCCCAAGCACTTGTGGTCTCAATTTGATCACCGCCCAAAAATCTGGTTTGAGCGGTGATCAAAATAATGAGACCACAAGTGAAATAATGCGGCGCCCTAGAGGACGCCCATCCGGTTCCAAAAACAGGCCCAAGCCGCCTCTCATAATAACGTGCGAGCCCGAGCCCGTCATGAGCCCGTTCATTCTAGAAATCCCGGGCGGAAGCGGCGTCGTTGAGGCCCTAGCCCGCTTCAGCCGCAGAAAGAACACCGGCCTTTGCGTTTTAACCGGTTCCGGAACCGTGGCCAACGTCACTCTCCGTCAACCTTCTTTCACTCCTGCCGGCGCCTCTGTCGCCACCGTCACTTTCCATGGCCGCTTCAATATCCTCTCCATGTCCGCCACCTTCCTCCACCACGGTTCTCCGGCGGCGATTCCGAACGCCCTCGCCGTGTCCCTTTCCGGACCGCAGGGGCAGATTGTCGGCGGACTCGTCGCCGGGAGGCTCCTCGCCGCGGGCACGGTGTTTGTGATTGCCGCGTCGTTCAACAACCCGTCGTATCACCGGCTTTCGTCGGAGGAGGACGCGCAGAACACCTCTGATGGCGGCGGAGACAGGCAGTCTCCGGCCGAGTCTAGTATGTACAGCTGCCACCGTCCTTCGGATGTGATTTGGGCTCCAACCCCTAGACCACCTTTCTGA 771 0.5733 MFSKLHSQHSQQPQPFQFSREYQSSKEDDIPSTCGLNLITAQKSGLSGDQNNETTSEIMRRPRGRPSGSKNRPKPPLIITCEPEPVMSPFILEIPGGSGVVEALARFSRRKNTGLCVLTGSGTVANVTLRQPSFTPAGASVATVTFHGRFNILSMSATFLHHGSPAAIPNALAVSLSGPQGQIVGGLVAGRLLAAGTVFVIAASFNNPSYHRLSSEEDAQNTSDGGGDRQSPAESSMYSCHRPSDVIWAPTPRPPF 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01806 256 ProSiteProfiles PPC domain profile profile. 84 226 IPR005175 -
Gma14g01806 256 Pfam Plants and Prokaryotes Conserved (PCC) domain 89 207 IPR005175 -
Gma14g01806 256 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED 10 254 - -
Gma14g01806 256 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 10 254 IPR014476 GO:0003680
Gma14g01806 256 MobiDBLite consensus disorder prediction 28 55 - -
Gma14g01806 256 MobiDBLite consensus disorder prediction 1 21 - -
Gma14g01806 256 MobiDBLite consensus disorder prediction 212 238 - -
Gma14g01806 256 SUPERFAMILY AF0104/ALDC/Ptd012-like 87 218 - -
Gma14g01806 256 CDD DUF296 89 205 IPR005175 -
Gma14g01806 256 MobiDBLite consensus disorder prediction 1 76 - -
Gma14g01806 256 Gene3D - 88 223 - -
Gma14g01806 256 MobiDBLite consensus disorder prediction 212 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01806 Gma-Chr14 48475535 48476652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01806 52 255 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 55.217 5.32e-75 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01806 - - gmx:100806014 496.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01806 14 48475535 48476652 Gma14g01806 14 48475535 48476652 ECH
Gma14g01806 14 48475535 48476652 Gma02g02025 02 45828221 45829525 GST
Gma14g01806 14 48475535 48476652 Gma04g02141 04 51884871 51886211 PCT