Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02528 ATGGCAATTCAACAATATATGGGTATCATTACGGTTATATTTTGCATCATTTTGGCTTTTAATATTATGGCAGTAGTCAGCATTGAAGAGAAGAAAACTCAAGAAGAATTCATTGGCCAACTATTTGATCCAGCATCTGGACTATTGACTGAAGACACGGCAGAGGTACTATGGATCACTTGCAGGGAAGATTTTATTCTTTTAAAGAAAGAAGTTGGAGATCTTGACTTATGCCTCCCAAAGGAATCATACAGAAACACCAATGAAATTAGTTCAGCAATTGGCTCAATAGCTAGAGAAAACATCAAAAAATTGATTAGTACATGTTATCCTCAGTTAAAGGAAAATGTTCTTCACTGTTTGAGAAAAAACAATTTTCCATTCAATGTTCTCCAGCAAGAGGGTGACTCCAAGATTTGGCATGCCACTTACATGGGATCACTTTCTTCTAGAAGATATTTGGGTCGAGTTTTTCCCCAGCACGTATCAGAAATATCAATCAAGGAAGATGAATCACCAAAAAGGAATAAGCCTAAGGATCAAGACTCCGATAAAAAAGACAAAAAAAAGAAGTCCAAGTCTTCTGACTCTAAGGACGAAAACAAAAACACATCTATGGCTATAATTACAATAGTGGCAATTTTAGTTGCTGCATTGTTCTTTTTATGTTGTTGTCGTCGATGTTGTGGGAGTGGTCGAGTTAGCCAAAATGACGAGAGGCCCCTTCTTAGCATGAGCATAAATgactactcagttggttcttctTCCAATAACAATCCATATAAAAACTCAATAAAAGAGGAGAAAATTGGGTTTCAATCATCAAGTAATACAATATTGGTTGATGACAAGAATAACTCAATGAAGCAAATTCAATTAGCAGGAGTTGCTGCTAGTGCTGCAACAAGACCACCATTTGAGTTAAATCCTCCTCCGGGGAGAGTAGCAAATAATGGAGTGCTTCCTTTGAAACCTCCTCCTGGAAGGCCTGATCTTCTTCCTCCTGATCCGTGTTCAATTAAGCCTTCTGATAGTTCCATTGTtccttctcctccacctcccccacctcctccacctggacctcctccacctcctccacctcctAGCGGTGGCCCTCGACCACCGCCTCCTCCTAGCAATGGCCCTAGAGCTCCTCCACCACCACCACTTAGAGGCAAGCCTGGTCCTAGACCTCCACCACCTCCTAGAGTTGGTGGAGGTCCTCCAAGAGCACCACCCCCATTTGGTTCAAAGGTTGCTAAGACTCAGGAAGAAGTTGGAGCAAATTCTGAAGGTGATCAAGCTAATGCTACTAATAAAGCTAAGCTAAAGCCTTTTTTCTGGGATAAGGTTCAAGCTAACTCAGATCAAACAATGGTCTGGAATCAACTCAAAGCAGGATCATTCCAGTTTAATGAAGAAATGATGGAGACGCTTTTTTGCTATAATACTACGCCTGTGGACAAAAGCAAAGGGCAACAAAAGAAAGAGACTTCCTCCCCGGCAGCTTCACCTCAATATATACAGATCATTGACTCAAAGAAATCACAAAATTTATCTATTCTATTAAAAGCATTGAATGTGACAATAGAAGAAGTCTGTGATGCACTTCTTGAAGGAAATGAGCTCCCCACAGAATTCCTCCAATCTTTACTGAAGATGGCACCAACATCAGAGGAAGAACTTAAGCTTAGACTTTTCAATGGTAATTTAGCCCAACTTGGTCCTGCGGATAGGTTCCTAAAAGCCCTAGTTGACATTCCATTTGCTTTTAAACGAATGGAAGCACTACTTTACATGGGTACTCTTCAAGAAGAACTCACTAGTACTCGAGAATCTTTTGCAATTTTAGAGGTTGCCTGCAAAACGCTAAGAAGCAGTAGATTGTTCCTCAAGCTTCTTGAAGCCGTTCTCAAAACCGGCAACCGTATGAACGATGGAACGTTCCGTGGTGGCGCACAAGCATTCAAACTCGATACACTTCTGAAACTATCTGATGTAAAAGGAGTAGATGGCAAGACCACTCTCCTACACTTCGTTGTTCTAGAGATAATGCGAACCGAGGGCATAAGAGCTGCACGAATGGCAAAAGAGAGCCATAGTTTCTCTAGCATAAAAACAGATGATCTTCTTGAAGACATTTCTTTTGAATCAGAAGACCAATACCGCGAACTTGGCCTTCAAGTGGTTTCACGTTTGAGCAGTGAACTCGAGAATGTGAAGAAAGCAGCAGCGTTAGATGCTGATGCATTGATAGGAACAACCTCTAGACTAGGCCATGGACTCATAAAAACAAGAGATTTTGTAAACAAAGACCTAAGTGACATAGATGATGACAAAGGCTTTCATGAGACAGTGAAGAGTTTTGTGGAGAAAGCTGAGGTTGATGTCACGAGTTTGCTAGAAGAAGAGAAGCAAATCATGGCCCTAGTGAAGAACACTGGTGATTACTTTCATGGGGACTCAGGGAAGGATGAAGGGTTGAGATTGTTTATGATAGTACGTGATTTCTTGGTAATGTTGGATAAGGAGTGCAAGGAGATTAAGAATGCACCAAAGAAGCCGGTAGTGAAAAATGTGAAGAGAGAAGCTTCTAATCATTCTAGAAAGTCGTCTTCCTCAGAAAATCATCCTCTTCCTTCTGATATCCGTCAGAGAATGTTTACAGCAGTAGTGGCAAATACAAGGATGGATGACTTTAGTTCTGATGATGAGAGTCCTTAA 2724 0.3939 MAIQQYMGIITVIFCIILAFNIMAVVSIEEKKTQEEFIGQLFDPASGLLTEDTAEVLWITCREDFILLKKEVGDLDLCLPKESYRNTNEISSAIGSIARENIKKLISTCYPQLKENVLHCLRKNNFPFNVLQQEGDSKIWHATYMGSLSSRRYLGRVFPQHVSEISIKEDESPKRNKPKDQDSDKKDKKKKSKSSDSKDENKNTSMAIITIVAILVAALFFLCCCRRCCGSGRVSQNDERPLLSMSINDYSVGSSSNNNPYKNSIKEEKIGFQSSSNTILVDDKNNSMKQIQLAGVAASAATRPPFELNPPPGRVANNGVLPLKPPPGRPDLLPPDPCSIKPSDSSIVPSPPPPPPPPPGPPPPPPPPSGGPRPPPPPSNGPRAPPPPPLRGKPGPRPPPPPRVGGGPPRAPPPFGSKVAKTQEEVGANSEGDQANATNKAKLKPFFWDKVQANSDQTMVWNQLKAGSFQFNEEMMETLFCYNTTPVDKSKGQQKKETSSPAASPQYIQIIDSKKSQNLSILLKALNVTIEEVCDALLEGNELPTEFLQSLLKMAPTSEEELKLRLFNGNLAQLGPADRFLKALVDIPFAFKRMEALLYMGTLQEELTSTRESFAILEVACKTLRSSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLSDVKGVDGKTTLLHFVVLEIMRTEGIRAARMAKESHSFSSIKTDDLLEDISFESEDQYRELGLQVVSRLSSELENVKKAAALDADALIGTTSRLGHGLIKTRDFVNKDLSDIDDDKGFHETVKSFVEKAEVDVTSLLEEEKQIMALVKNTGDYFHGDSGKDEGLRLFMIVRDFLVMLDKECKEIKNAPKKPVVKNVKREASNHSRKSSSSENHPLPSDIRQRMFTAVVANTRMDDFSSDDESP 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02528 907 MobiDBLite consensus disorder prediction 423 437 - -
Gma13g02528 907 MobiDBLite consensus disorder prediction 856 870 - -
Gma13g02528 907 PANTHER FORMIN-RELATED 192 346 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gma13g02528 907 PANTHER FORMIN-RELATED 1 160 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gma13g02528 907 PANTHER FORMIN-RELATED 349 905 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gma13g02528 907 ProSiteProfiles Formin homology-2 (FH2) domain profile. 433 867 IPR015425 -
Gma13g02528 907 MobiDBLite consensus disorder prediction 323 337 - -
Gma13g02528 907 SUPERFAMILY Formin homology 2 domain (FH2 domain) 446 853 - -
Gma13g02528 907 SMART it6_source 433 856 IPR015425 -
Gma13g02528 907 MobiDBLite consensus disorder prediction 165 200 - -
Gma13g02528 907 MobiDBLite consensus disorder prediction 302 438 - -
Gma13g02528 907 PANTHER FORMIN-LIKE PROTEIN 349 905 - -
Gma13g02528 907 PANTHER FORMIN-LIKE PROTEIN 1 160 - -
Gma13g02528 907 PANTHER FORMIN-LIKE PROTEIN 192 346 - -
Gma13g02528 907 MobiDBLite consensus disorder prediction 856 886 - -
Gma13g02528 907 Pfam Formin Homology 2 Domain 437 841 IPR015425 -
Gma13g02528 907 Gene3D Formin, FH2 domain 439 877 IPR042201 -
Gma13g02528 907 MobiDBLite consensus disorder prediction 346 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02528 Gma-Chr13 40174931 40179341 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02528 440 892 FH2 protein (formin) Gene Family AT5G54650 65.198 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02528 - - gmx:100782988 941.414
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02528 13 40174931 40179341 Gma13g02528 13 40174931 40179341 ECH
Gma13g02528 13 40174931 40179341 Gma12g02029 12 40926338 40930840 GST
Gma13g02528 13 40174931 40179341 Gma12g01234 12 16432811 16440147 PCT
Gma13g02528 13 40174931 40179341 Gma06g02454 06 46843956 46851031 PCT
Gma12g01234 12 16432811 16440147 Gma13g02528 13 40174931 40179341 PCT
Gma06g02454 06 46843956 46851031 Gma13g02528 13 40174931 40179341 PCT