Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00341 ATGTCTGTGAACATGATGCTTCTTCTTGTGATCCTTTTTGTTTTACAAAGTTTTCTAATACCAACATGCTATTGCCAAACCAATACTCCTCAGAATATCGAAATATTTTATCCAATCCAAACTCCAAAACCACCCTTTCCAATCCAACCTCCTGAGTCACAACCAAAGCCACAAGCATCACCACCATCACCAGGACCAGTAGCTGCATCAAAAACCTCTTCGTCAAGCAGTAAGATCGGAACAGCGGTGGCTGCAACTGCAGCAGGTACTCTAGTTGTTTCTGGTTTGATTTTCTGCTTGGTCCAAAGGTGCTTCAGAGCAAGGAAGAGAAAGGAGGTCACAAACAACACTGCTTCTGCCGTAGATAGGCGCGTTGCACCTCAGGTCAACGTGTTTGAGAGAATGGAAGGGAACGTCAAGGGACTAATTGTTGATGAGGATGGTTTGGATGTGGTTTATTGGAGAAAACTTGAAGGTAAGAAATTACCAGACAAGGATTTCCAAAGGGAGGTTTTGGATGGCACCCAAGATAAAATAGAAGATGATCATGAGGAGAATCAAAGGAAAAGATCCGAGTCCATTCAAGAAATTCCTCTGCTTAGAGACAGATCTTCAACTTCTCACATGAATATATTTCTTCCAGAAGAGTCATATACAATCATGAGAATTCCACCTCCTGCTCCTCCTCCCAGTGTTCCTTCATCAATTGGAGGCTCTTCTACTCAATCACCTTCTCCACCCTTTACTCCTTCATCACCAAAACCACTCAACACTTCTTTCTCATCAATTTCAAACAAGACAAGTCCTGCACTACCAATAACTGATATAAATAATCAagcaccagcaccacctcctccaccaccaatcgcaggtataaaaagctcagcactgccaccgcctcctccaccaatcccagttaaaaagaactcagcagcagcaccaccacctcctccaccaatcccaaataaaaagaactcagcagcagcaccacctcctccaccaattcctccaagaaagagtccagcaccacctcctcctccaccaaAAGCAAGTGGTTTGAAGTCATCATCAAAACCACCACCTACCCCTATTGAAAGAACACCAAGTACCACAAGTAGGCAAGGAAATACTTCACCTGAGGTGAAACTGAAGCCATTGCATTGGGATAAGGTGACTACCAACCTTGATCACTCTATGGTGTGGGACAAAATGGACCGTGGTTCTTTCAGGGTTGATGATGATCTTATGGAAGCTCTCTTCGGGTTAGTTGCTACCAACCGAAATGACAATACCCCAAAAGTAAATAACTCAATGAGTCCTAGCAGGGATGCTTTGGCTACTTCAGTGAATACCTTCATTCTTGACCCCAGAAAATCACAAAACATTGCTATTGTTTTGAAGTCTCTGGCAGTCTCTCGTAAAGAAATTATTGAAGCACTCATTGATGGTCAAGGCCTTAACACAGACACCATTGAAAAGCTTGGTAGAGTAGCCCCAACAGAAGAAGAGCAATCACTTATACTTGCACATGAAGGAGACCCTTCAAAACTTGCTGCAGCTGAATCTTTCCTACATCACATCCTCAAAGCTGTTCCTTCAGCATTTAAGCGCTTGAGTGCTTTGTTATTCAGGTTGAATTATGATTCTGAGATTGTAGAAATCAAGGAGTTTCTGCAGACTCTTGAGCTGGGGTGCAAGGAGCTTCGAAACCAAGGAATTTTTGTGAAGCTTCTTGAAGCAGTGCTTAAGGCTGGAAATCGCATGAATGCAGGCACTCAAAGGGGTAATGCTCAAGCTTTCAACTTGGCTTCTCTCAGAAAGCTCTCTGATGTCAAGAGCACTGATGGAAAAACCACATTGCTTCACTTTGTGGTTGAAGAAGTAGTTCGTTCGGAAGGAAAACGTGCTGTTCTTAACCGCAATCACAGTTTGAGTCGTAGTAGCAGTAGGAACAGCAACAGCAGTGTAGACTCTAAAAACTCTGCTGCTTCAAATGAACAAAGACAAAGGGAATACATAACACTAGGATTGCCAGTTGTAGGAGGGATCAGTTCTGAGTTTCCCAACTTAAAGAAAGCTGCGGTTACAGATTACAAAAGTTTTGTTGGTTCAATCTCATCACTCTCAGCCAGGATTGTTGAGATTAGAGAACTTGTTTCCAAGTGTGGAAATGACAAGGGAGGAAACTTTGTGAGAGAAATGAACAATTTTCTTGAAAATGCTGAGGAGGAACTTAGATTAGTGAGGGAGGAGCAAACAAGGGTAATGCAGCTTGTGAGAAGAACGACAGATTATTATCAAGGAGGAGCTTCAAAAGATAGTGCAGAAAACCCTCTTTATCTATTTGTCATAGTTAAGGATTTTCTGGGAATGGTTGATCAAGCATGCATTGAGATTGCTCGTAACATGCAGAAGAGGAAGACACCTAAGGTAAATTAA 2439 0.3821 MSVNMMLLLVILFVLQSFLIPTCYCQTNTPQNIEIFYPIQTPKPPFPIQPPESQPKPQASPPSPGPVAASKTSSSSSKIGTAVAATAAGTLVVSGLIFCLVQRCFRARKRKEVTNNTASAVDRRVAPQVNVFERMEGNVKGLIVDEDGLDVVYWRKLEGKKLPDKDFQREVLDGTQDKIEDDHEENQRKRSESIQEIPLLRDRSSTSHMNIFLPEESYTIMRIPPPAPPPSVPSSIGGSSTQSPSPPFTPSSPKPLNTSFSSISNKTSPALPITDINNQAPAPPPPPPIAGIKSSALPPPPPPIPVKKNSAAAPPPPPPIPNKKNSAAAPPPPPIPPRKSPAPPPPPPKASGLKSSSKPPPTPIERTPSTTSRQGNTSPEVKLKPLHWDKVTTNLDHSMVWDKMDRGSFRVDDDLMEALFGLVATNRNDNTPKVNNSMSPSRDALATSVNTFILDPRKSQNIAIVLKSLAVSRKEIIEALIDGQGLNTDTIEKLGRVAPTEEEQSLILAHEGDPSKLAAAESFLHHILKAVPSAFKRLSALLFRLNYDSEIVEIKEFLQTLELGCKELRNQGIFVKLLEAVLKAGNRMNAGTQRGNAQAFNLASLRKLSDVKSTDGKTTLLHFVVEEVVRSEGKRAVLNRNHSLSRSSSRNSNSSVDSKNSAASNEQRQREYITLGLPVVGGISSEFPNLKKAAVTDYKSFVGSISSLSARIVEIRELVSKCGNDKGGNFVREMNNFLENAEEELRLVREEQTRVMQLVRRTTDYYQGGASKDSAENPLYLFVIVKDFLGMVDQACIEIARNMQKRKTPKVN 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00341 812 MobiDBLite consensus disorder prediction 174 201 - -
Gma01g00341 812 MobiDBLite consensus disorder prediction 639 667 - -
Gma01g00341 812 MobiDBLite consensus disorder prediction 46 73 - -
Gma01g00341 812 Coils Coil 731 758 - -
Gma01g00341 812 MobiDBLite consensus disorder prediction 254 275 - -
Gma01g00341 812 MobiDBLite consensus disorder prediction 220 385 - -
Gma01g00341 812 MobiDBLite consensus disorder prediction 46 64 - -
Gma01g00341 812 PANTHER FORMIN-RELATED 311 810 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gma01g00341 812 PANTHER FORMIN-RELATED 5 322 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gma01g00341 812 MobiDBLite consensus disorder prediction 174 197 - -
Gma01g00341 812 ProSiteProfiles Formin homology-2 (FH2) domain profile. 373 812 IPR015425 -
Gma01g00341 812 PANTHER FORMIN-LIKE PROTEIN 4 311 810 - -
Gma01g00341 812 PANTHER FORMIN-LIKE PROTEIN 4 5 322 - -
Gma01g00341 812 Gene3D Formin, FH2 domain 395 811 IPR042201 -
Gma01g00341 812 MobiDBLite consensus disorder prediction 640 667 - -
Gma01g00341 812 SUPERFAMILY Formin homology 2 domain (FH2 domain) 343 807 - -
Gma01g00341 812 MobiDBLite consensus disorder prediction 278 354 - -
Gma01g00341 812 Pfam Formin Homology 2 Domain 377 792 IPR015425 -
Gma01g00341 812 SMART it6_source 373 807 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00341 Gma-Chr1 4067508 4070617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00341 4 808 FH2 protein (formin) Gene Family AT1G70140 44.823 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00341 - - gmx:100780368 1288.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00341 01 4067508 4070617 Gma01g00341 01 4067508 4070617 ECH
Gma01g00341 01 4067508 4070617 Gma02g00248 02 2491904 2494402 GST
Gma01g00341 01 4067508 4070617 Gma18g01182 18 18184744 18187170 PCT
Gma18g01182 18 18184744 18187170 Gma01g00341 01 4067508 4070617 PCT