Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00498 ATGTCAGACTTGGTGGACTTGCCAGTTTCCTCAGATAGATCTCCTCCTGCTAATGTTGGTCAAGACTCGCCTCCAGCAGATACTGAACCTCCACCTTCAGCTTCTCCTCCTACTCCCCAGCAGGATCCTTCCCCACCCGAATCATCAACCGCCACCCCTCCACCAGGCAATTCTTCTTCATCTCCCTCGCCTCCGTCAGATTCAGAATCGTCACCACCTTCTCCACCTTCGGATTCCAACTCTTCGCCACCGTCAGATTCAGGATCTTTGCCACCTAATCCCCCACCAGAATCAAACTCTTCAGTGCCTCCACCACCAACAGGTTCAGACTCTTCACAGCCTTTGCCCCCATCAGAATCAGATTCTCCACCGCCTAAAGGTTCCTCTTCTTCGTCGCCATCACCACCAGATTCCAATGTTTCTCATCCTCCCCCAGCTGTCCCCAACCAGTCAGCTTCCCCACCTTCTGGTACTCCCCCTCCATCAGAAATTTCTTCTCCGTCTCCAACTAATTCTCCTCCTGTTGAATCCTTACCAGCTCCAGCAGGCTCTAATGGTTCTCCTCCATCCCCTGCTGGAAGTTCAGGATCATCACCTCCTGTACAAACAGTCTCCCCTCCATCACTTGAAACGCCACCTGTTGCCAACCCTTCTCCTCAGTTGCCTGTCTCGCCACCAGCACCTGCAACCCATAACCCCACTCCCTCAAAAGAGGTCACACCTTCATCACCATCTGTGTCAACCCCTCCAGCTTCTCAAACATCACATCATGTTCCAAACCTAACTACTCCTTCCACACACTCCAGCCCTCCATTGAAATCGAGTGACAATTCTGGAGGTGGGACTGTTACTGGTGTAACAGTAGCAGGAGTGGTAATCATTGCCTTGGTTGCCTTCTTTTTTGTAATCTCAAGGAGGAGGAAAAGACGGGCACAGGCTTTCGCAGCCCATTACAGACCTCCACCTGAAAGCTTCTCAATAAAATCAGATGGGTATTACTATAGACAGCAACACATGCAGCAACACACAATGGGGATTTCTGGTCAATCGCAAGAATACTACGGTGGGAAACCCCCACCTTCTCCTTCTGCAATTGGTAACAGCTATGGAAGCTACAGAGGAAATACTGGAACATCAGATTCGGGTGCATTGGGGAGTACAAAGTCGTTGTTCAGCTATGAAGAGTTGAGGGAAATAACAAATGGATTTTCTCTGCAAAATGTTCTTGGCGAGGGTGGGTTTGGATGTGTGTACAAGGGTTGGATGGCGGATGGAAGACTAGTGGCAGTGAAAGAGCTCAAGGCTGGCAGTGGACAGGGGGAACGGGAATTCAAGGCTGAAGTTGAGATCATTAGCCGCGTTCACCATCGGCATTTGGTCTCTCTGGTGGGATACTGCATTGCTGAACATCATAGGTTGCTTGTCTATGAATTCGTTCCAAATAATACTCTTGAACATCATTTGCACGGGAAAGGAATGCCTGTAATGGAATGGTCAAAAAGAGTTAAAATTGCTATAGGTGCTGCTCGTGGGTTGGCATATCTACATGAAGATTGTCATCCAAAGATTATCCATAGGGACATCAAGTCGGCAAACATCCTGTTGGATGACGCTTTTGAGGCACAGGTTGCTGACTTTGGGCTTGCCAAACTATCAAATGACACTCACACCCATGTGTCAACTCGTGTTATGGGGACATTTGGGTATATGGCACCGGAGTATGCATCAAGTGGAAAATTGACTGATAGATCCGATGTGTTCTCGTTTGGGGTCATGCTTCTAGAGCTTGTGACTGGACGCAGACCTGTTGACCCAACTCAACCATTGGGGGATGAGAGTTTAGTTGAATGGGCTCGGCCACTCCTTATAGGTGCCCTTGAAACCGGAGATTTCACAGAACTAGCAGATCATAGGCTTGAGAAAAGATATGTGGAGAGTGAGATGCTTAGAATGATTGAGGCAGCCGCTGCTTGCGTTCGTCATTCTGCTCCAAAGCGACCCCGCATGGTGCAGGTGTTAAGAGCATTGGACACTGAGGGTGACATGCCAGATCTTACCAACGGCGTGAAATTTGGCCAGAGCACCATCTATGAGTCTGGCCAGTACAATGCAGACATTCAGAGATTCCGGAGGATGGCATTTGGTAGTGATGAGAGCTCGGAGTATGGCATGTACAGTGGGGAGTACAACTCTAGAGAGGTACCCCACAGACCTCCGAGTTCATGGAGACCCGGGGAGTCTGGTTCGGTTGAGTTCTCATGTGGTGACTCAGAAACTTGTGCCATAAACCCACGAGGTGTTGAGCGGAGTACCAACAAAGTCCACGCCAACTACTGA 2337 0.4938 MSDLVDLPVSSDRSPPANVGQDSPPADTEPPPSASPPTPQQDPSPPESSTATPPPGNSSSSPSPPSDSESSPPSPPSDSNSSPPSDSGSLPPNPPPESNSSVPPPPTGSDSSQPLPPSESDSPPPKGSSSSSPSPPDSNVSHPPPAVPNQSASPPSGTPPPSEISSPSPTNSPPVESLPAPAGSNGSPPSPAGSSGSSPPVQTVSPPSLETPPVANPSPQLPVSPPAPATHNPTPSKEVTPSSPSVSTPPASQTSHHVPNLTTPSTHSSPPLKSSDNSGGGTVTGVTVAGVVIIALVAFFFVISRRRKRRAQAFAAHYRPPPESFSIKSDGYYYRQQHMQQHTMGISGQSQEYYGGKPPPSPSAIGNSYGSYRGNTGTSDSGALGSTKSLFSYEELREITNGFSLQNVLGEGGFGCVYKGWMADGRLVAVKELKAGSGQGEREFKAEVEIISRVHHRHLVSLVGYCIAEHHRLLVYEFVPNNTLEHHLHGKGMPVMEWSKRVKIAIGAARGLAYLHEDCHPKIIHRDIKSANILLDDAFEAQVADFGLAKLSNDTHTHVSTRVMGTFGYMAPEYASSGKLTDRSDVFSFGVMLLELVTGRRPVDPTQPLGDESLVEWARPLLIGALETGDFTELADHRLEKRYVESEMLRMIEAAAACVRHSAPKRPRMVQVLRALDTEGDMPDLTNGVKFGQSTIYESGQYNADIQRFRRMAFGSDESSEYGMYSGEYNSREVPHRPPSSWRPGESGSVEFSCGDSETCAINPRGVERSTNKVHANY* 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00498 778 PRINTS Proline rich extensin signature 49 65 - -
Eupl11g00498 778 PRINTS Proline rich extensin signature 13 25 - -
Eupl11g00498 778 PRINTS Proline rich extensin signature 72 89 - -
Eupl11g00498 778 PRINTS Proline rich extensin signature 92 117 - -
Eupl11g00498 778 PRINTS Proline rich extensin signature 25 46 - -
Eupl11g00498 778 Pfam Protein tyrosine and serine/threonine kinase 404 674 IPR001245 GO:0004672|GO:0006468
Eupl11g00498 778 ProSitePatterns Protein kinases ATP-binding region signature. 409 431 IPR017441 GO:0005524
Eupl11g00498 778 MobiDBLite consensus disorder prediction 1 279 - -
Eupl11g00498 778 CDD STKc_IRAK 409 677 - -
Eupl11g00498 778 MobiDBLite consensus disorder prediction 187 204 - -
Eupl11g00498 778 MobiDBLite consensus disorder prediction 348 372 - -
Eupl11g00498 778 SMART serkin_6 403 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g00498 778 MobiDBLite consensus disorder prediction 233 279 - -
Eupl11g00498 778 FunFam proline-rich receptor-like protein kinase PERK8 479 691 - -
Eupl11g00498 778 ProSiteProfiles Protein kinase domain profile. 403 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g00498 778 Gene3D Transferase(Phosphotransferase) domain 1 479 686 - -
Eupl11g00498 778 ProSitePatterns Serine/Threonine protein kinases active-site signature. 523 535 IPR008271 GO:0004672|GO:0006468
Eupl11g00498 778 FunFam Proline-rich receptor-like protein kinase PERK8 375 478 - -
Eupl11g00498 778 MobiDBLite consensus disorder prediction 730 749 - -
Eupl11g00498 778 Gene3D Phosphorylase Kinase; domain 1 371 478 - -
Eupl11g00498 778 MobiDBLite consensus disorder prediction 87 176 - -
Eupl11g00498 778 MobiDBLite consensus disorder prediction 25 80 - -
Eupl11g00498 778 SUPERFAMILY Protein kinase-like (PK-like) 380 676 IPR011009 -
Eupl11g00498 778 MobiDBLite consensus disorder prediction 205 232 - -
Eupl11g00498 778 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 290 719 IPR047117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00498 Eupl-Chr11 6207628 6214874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00498 270 672 Trihelix Transcription Factor Family AT1G68690 58.780 4.00e-161 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Eupl11g00498 PK_Tyr_Ser-Thr 1.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00498 - - ming:122078316 746.888