Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00849 ATGAAGGCGCCGGCGAACGTTGCAGCGGCAACGGCCAATCCTTGCGAAGGAGAGAGGAAGAGCATCAACCCTGAGCTATGGCACGCGTGTGCCGGACCGCTTGTTACGTTGCCGCCGGTTGGAAGCCTTGTCGTGTATTTCCCTCAAGGCCATAGCGAACAGGTTGCAGCATCCATGCAGAAAGATGTAGAAGCTCACATCCCAAATTACCCGAATTTACCCTCGAAGCTAATGTGCCTCCTTCTCAATGTCACATTGCATGCGGATGCAGAAACAGATGAAGTGTATGCTCAGATGACACTTCAGCCCGTTTCTACATTGGACAAGGATGCAGTACTGGCATCAGATCTTGGACTTAAGTCAAATAAAACACAAACAGACTTTTTCTGTAAAACATTGACTGCGAGTGATACAAGCACTCATGGAGGTTTCTCTGTACCCCGCCGTGCAGCAGAGAAGATCTTCCCACCTCTCGATTTCCAAATGCAACCACCTGCTCAAGAACTGGTGGCCAGAGACTTGCATGATAGTGCCTGGACTTTCCGTCACATTTACCGAGGTCAGCCAAAACGGCACTTACTTACAACAGGTTGGAGCTTATTTGTAAGTGGAAAGAGGCTCTTTGCTGGTGACTCTGTCTTATTTATTAGAGATGAAAAGCAGAATCTTCTATTGGGAATTAGACGGGCTAACAGGCAACCCACAAATATATCGTCATCGGTATTGTCAAGCGATAGTATGCATATAGGGATCCTAGCAGCAGCAGCCCATGCAGCTGCAAACAACAGTCCCTTCACTGTGTTTTATAACCCAAGCCTTTGTTTTAGCAGGGCTAGTCCATCAGAATTCGTTATTCCTTTCGCCAAGTACTACAAGGCAGTGCACAGCAACCAAATATCCCTTGGCATGCGTTTTCGGATGATGTTTGAAACCGAAGAGTCAGGAACAAGAAGGTATATGGGTACAATTACAGGCATCAGCGATCTTGATCCTGCAAGGTGGAAAAACTCACAATGGCGTAATCTGCAGGTTGGCTGGGATGAGTCCACTGCTGGAGAAAGGCGTAACCGAGTCTCAATCTGGGATATTGAACCGGTGGCAGCTCCATTTTTCATCTGCCCCCCGCCATTCTTCAGATCAAAGCGCCCCAGACAGCCAGGAATGCCAGACGATGAGTCTTCTGATATAGAGAATCTTTTCAAGAGAACGATGCCTTGGCTTGGTGATGATATTTGCATAAAGGATCCTCAGTCTCAGAATGCTGTAATCCCTGGCCTGAGTTTGGTCCAGTGGATGAACATGCAGCAAAATCCTCCCCTCGGTAACTCAGCCATGCAACCTGACTATATGCGCTCTCTAAGCAGTCCCATTCTACAGAACCTTGCTGCAGCAGATCTTTCCCGTCAGTTGGGCTTGCCGGGGCCACAGATCTTGCAGCAAAACAGCTTACAGTTCAATGCACAGAGGCCATCTCAACAAGTGCAACAGCTTGATCAGCTCCCAAAGCTACCGACCTCATTGAACCAATTAGGGCCCATTATGCGGCCACAGCAACAACTGGATGACATTAATCAGCAGCAAAGGCAGAATTTGGCTAATCAAACACTTACCACAAACCAAGCTCAGGCCCAACTATTACAACCTCAAGTTCTAGTCCAGAGTCACATTCATCAGCAGCAACCACTGATCCAGAACCATCAACCTCACACCAACTTCCCTCACACCAACCTACCTCAGAACCAGCAACAGCAACCACAGCAGCAGCAGCAGCAACAACAGCAACAACAACAACAACAACAACAACAACAGCAACAAATTACAGGTCAGAACCAACAGCAAAACCGAATTACGGTTCAGCTCCCACACCAAGTGAACCAACAGTTACAGATGTCGGAACAGCAGATTCAGTTGCAACTGTTACAAAAAATTCAGCAGCAACAGCAGTCATTCCTGTCGCAACAGTCTACACTTCAACAGCCTCCCCAACTGACCCAACTCCAAGAGCAGCAGAGGCAGTTGTTGGAAGTGCCTCAAAGTTTATCTAATCCAAACTCACTTCCTCAGCAGCACATGATTCAACAGCAGACGATGAAGAACAATACCCAACAGGGCATGAGGTTCTCTCATCTGCCCCAGCAGCATCAGTCACAACCAAAGCTTCAGCAGCAACCACCCATGTTCACTGAATTGCCTGGATTGGTATTTACTCCAGACCCAACAACCAATTTGCTCTCATCAACAGGTAGTGGTTTATTGGCGACGACGGGTGGTGGGGCCCACTCAGGGCTGACCGATGACATGCCTTCCTGTACCACGTCACCTTCCACAAACAACTGCCCCACTGTAGGCCAACCCATCATTAACAGTAGGACCCACCACAGCACAACCATGACAGATGAGATGTCTCAGTCTGTGGCAACACTCTTGAGTCCCTGTGCTTTAGAAGCCATGTCAGCTAGCGCAAACTTAGTTAAGGAGTTGCATCAGAAGTCTGATATCAAGCCTTCATTACCTATTTCCAAGAGTCAGAATCAAGGGGTTGTTGCCTCGCAATCATATCTAAATGTCGCAGCCCAGATGGATTACCTGGACGCATCTTCTTCAGCAACTTCAGTCTGCCTTTCTCAGAATGATGGGCCATTACAACAGAATTTCCCATTGTCGTCTTTCAATCCACAGTCAATGTTGTTCAGAGACACGAGTCAGGATGGGGAAGTGCAGGCTGATCCCAGGAATAATGTTCTATTCGGGGTTAATATAGATGGCCCATTGGGAATACCATTGACTCCTGATCCTTTGCTGGCAAAGGGCGTGGGGCCGGCAAAGGACTTCCCAAATCATCTTTCTTCAGGAAGCATGCTCACAAACTATGGTAACTCCAAAGATGCCCAGCAGGAATTGTCATCCTCAATGGTTTCACAGTCATTTGGGGTTCCAGATATGGCATTCAATTCAATCGATTCTACCATCAATGACAGCAGCTTTTTGAACAGAGGTACATGGGCTCCACCCCCACAACTTCAGCGAATGCGGACATTCACCAAGGTGTACAAGCGTGGAGCTGTTGGTAGGTCTATTGATATTACCCGATATTCTGGCTATGATGAGCTCAAACAAGATCTGGCACGTAGGTTTGGGATAGAGGGACAGCTCGAGGACCGACAGAGGATTGGCTGGAAACTTGTCTACGTGGACCATGAGGGTGATGTCCTACTAGTGGGGGATGACCCTTGGGAGGAGTTTGTGAGCTGTGTTCGTTGCATCAAGATACTGTCTCCTCAAGAAGTCCAGCAGATGAGCTTGGAGGTAGATCTTGGGAATAGTGTCCTTCCAAATCAGGCCTGCAGCAGCTCAGATGGTGGGAACGCGTGGAAGAGTGGTCAATGCGACCAGAATTCTGGCAACCCATCTGCTGGATCATATGACCATTGA 3432 0.4814 MKAPANVAAATANPCEGERKSINPELWHACAGPLVTLPPVGSLVVYFPQGHSEQVAASMQKDVEAHIPNYPNLPSKLMCLLLNVTLHADAETDEVYAQMTLQPVSTLDKDAVLASDLGLKSNKTQTDFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFQMQPPAQELVARDLHDSAWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQNLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPSLCFSRASPSEFVIPFAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGISDLDPARWKNSQWRNLQVGWDESTAGERRNRVSIWDIEPVAAPFFICPPPFFRSKRPRQPGMPDDESSDIENLFKRTMPWLGDDICIKDPQSQNAVIPGLSLVQWMNMQQNPPLGNSAMQPDYMRSLSSPILQNLAAADLSRQLGLPGPQILQQNSLQFNAQRPSQQVQQLDQLPKLPTSLNQLGPIMRPQQQLDDINQQQRQNLANQTLTTNQAQAQLLQPQVLVQSHIHQQQPLIQNHQPHTNFPHTNLPQNQQQQPQQQQQQQQQQQQQQQQQQQQITGQNQQQNRITVQLPHQVNQQLQMSEQQIQLQLLQKIQQQQQSFLSQQSTLQQPPQLTQLQEQQRQLLEVPQSLSNPNSLPQQHMIQQQTMKNNTQQGMRFSHLPQQHQSQPKLQQQPPMFTELPGLVFTPDPTTNLLSSTGSGLLATTGGGAHSGLTDDMPSCTTSPSTNNCPTVGQPIINSRTHHSTTMTDEMSQSVATLLSPCALEAMSASANLVKELHQKSDIKPSLPISKSQNQGVVASQSYLNVAAQMDYLDASSSATSVCLSQNDGPLQQNFPLSSFNPQSMLFRDTSQDGEVQADPRNNVLFGVNIDGPLGIPLTPDPLLAKGVGPAKDFPNHLSSGSMLTNYGNSKDAQQELSSSMVSQSFGVPDMAFNSIDSTINDSSFLNRGTWAPPPQLQRMRTFTKVYKRGAVGRSIDITRYSGYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGDVLLVGDDPWEEFVSCVRCIKILSPQEVQQMSLEVDLGNSVLPNQACSSSDGGNAWKSGQCDQNSGNPSAGSYDH* 1144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00849 1143 ProSiteProfiles PB1 domain profile. 1011 1095 IPR000270 GO:0005515
Eupl09g00849 1143 Pfam Auxin response factor 255 343 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Eupl09g00849 1143 Pfam AUX/IAA family 1011 1096 IPR033389 -
Eupl09g00849 1143 FunFam Auxin response factor 298 369 - -
Eupl09g00849 1143 SMART B3_2 129 231 IPR003340 GO:0003677
Eupl09g00849 1143 SUPERFAMILY DNA-binding pseudobarrel domain 120 258 IPR015300 -
Eupl09g00849 1143 MobiDBLite consensus disorder prediction 565 595 - -
Eupl09g00849 1143 Gene3D - 127 230 IPR015300 -
Eupl09g00849 1143 FunFam Auxin response factor 127 231 - -
Eupl09g00849 1143 SUPERFAMILY CAD & PB1 domains 1024 1089 - -
Eupl09g00849 1143 FunFam Auxin response factor 1006 1100 - -
Eupl09g00849 1143 ProSiteProfiles B3 DNA-binding domain profile. 129 231 IPR003340 GO:0003677
Eupl09g00849 1143 Gene3D - 298 369 - -
Eupl09g00849 1143 CDD B3_DNA 128 220 IPR003340 GO:0003677
Eupl09g00849 1143 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 18 646 IPR044835 GO:0003677|GO:0006355|GO:0009725
Eupl09g00849 1143 Pfam B3 DNA binding domain 129 230 IPR003340 GO:0003677
Eupl09g00849 1143 MobiDBLite consensus disorder prediction 1119 1143 - -
Eupl09g00849 1143 Gene3D - 1007 1100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00849 Eupl-Chr9 17988399 17997943 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00849 1 486 B3 DNA Binding Superfamily AT1G19220 73.306 0.0 697
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Eupl09g00849 AUX_IAA 5e-08 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00849 - - nnu:104601628 1622.45