Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph4g0885 ATGCTTCGATTCGTCTTTGAGGACAAAGCAGAACCCTCAGAAATGAGCTTCTCGACGTCAGCTACGAGCAACATGAAGTTCATCACCAACACCGCCAACAGAGACAAAACAATGGCTCAGCACAGTGCTGATGCCGTGATTTTTGCTGAGTTTGGTCGTTCTAGTGTGTCTGGCAGATCATTCGACTACTCGAGGTCGGTGCTATACCCTCCACAATCGGTTTCGGAAGAGAAAATGACGGCTTATTTATCGAATATCCAGAGAGGGGGTCTTATTCAGCCCTTTGGTTGTATGATTGCAATTGAAGAAACCACTTTCAGAATCATCAGTTATAGTGAGAATTGCTTTGACTTGTTGGGTTTAGAAAGACATTTTGATTCAAAACAATTTATGGGTCTGATTGGAGTTGATATCAGAACCCTGTTCATGCCATCTTCTGGGGCTTCGTTTGCAAAAGCAGCGGCTTCAAAGGAAATATCGCTTCTGAACCCGATTTGGGTTTATTCAAGGACAACTCAGAAGCCATTCTACGCAATATTGCATAGGATTCATGTGGGGATCGTGATTGACTTGGAACCTGCACGGTCGAGTGGTCATGCTCTGTCACTCGCTGGAGCAGTACAGTCACAAAAACTTGCCGTTCGGGCAATTTCAAGATTGCAATCTCTTCCTGGGGAGATATTGGTGTGCTGTGATAAGGTTGTTGAAGAAGTGCAGAAGCTAACCGGATATGTCAGGGTTATGGTTTATAAGTTCCACGAGGATGATCACGGTGAATTAAAGCAAAACTGCGCCAGGATGATATGTGATTGCCATGCAAAACCAGTTAAGGTCATTCAGAGTCAACAATTAAGGCAACCGCTTTGCCTAGTCAATTCAACCCTCCGGTCACCACATGAATGTCACACACAATACATGGCTAATATGGGTTCTATTGCTTCTCTGGTGATAGCGGTTATAGTCAATGGAAGTGATACAACAAAGCTTTGGGGTTTATTAGTTTGCCATCACACTTCACCACGCCACGTGCCTTTCCCTTTTCGCTATGCTTGTGAATTCCTCATGCAGGCTTTTGGACTGCAGCTTTACATGGAGATGCTGCGAGCATCACAAATGACAGAGAAGAGAATGCTTAGAACGCAGACCTTATTATGTGATGTGCTTCTCCGCGATGCCCCATTGGGTGTTGTTACTCAATCTCCCAGTATCATGGATCTTGTGAAGTGTGATGGGGCGGCATTATGTTATGGTGGGGATTGTTACTTATTAGGCACTATCCCAACTGAGTCGCCGATAAAAGACATTGCAGAATGGCTGCTCAGTGATCATGGGGACTCCACGGGTTTGAGCACTGATAGTTTGGTCGAAGCTGGTTATCCAGGAGCTGCTTTACTTGGGAATGCAGTTTGTGGCATGGCAACAGCAAGAATAAATATGAGAGATTACTTGTTTTGGTTCAGGTCTTACGCTGCTAAGGAAGTTCAATGGGGAGGAACCAAGTACCATCCTGAGGATAAAGATGATGGAGGAAAAATGAATCCAAGATCGTCATTTAAAGCTTTCCTTGAAGTAGCCAAAAGCAAAAGCTTGCCCTGGGAAGCGTCAGAAATCGATGCTATTCACTCACTGCAGCTTATAGTGCGAGAATCCTTCCAAAACACACAGAATTTTGGTCCTAAGACTCTTAGTTATGCTCAGCGTAGTGATACTGCAATGGCTGGGGTGCACGAACTCAGTTCGGTAGCATTTGAGATGGTTAGATTAATTGAGACGGCAACAGTTCCGATTTTTGGAGTTAATTCAGCTGGTCTAATCGATGGATGGAATGTGAAAATTGCTAAATTGACGGGGCTCCAGGCCAATGAAGCTATGGGGAAATCCCTAGTAAATGAAATAGTCCATGATGACTCACGTGAAACTGTTGAAAATATTTTAAGCAGAGCCTTGCGAGGTCAGGAGGACAAAAATGTTGAGTTGAAATTAAAACATTTTGGGCCTCATCAACAAAAAGTTATATATATCATAGCTAATGCCTGCACAAGTAGGGATCACAGAAATGCTGTTGTTGGGGTATGCATTGTGGGTCAAGATATCACTTATGAAAAAGTTTTCCAAAACAGATTTATCAAATTGGAAGGAGACTACAAAGCTATCATCCAGAGTCTCAATCCATTGATTCCACCTATATTTGCTTCTGATGAGAATGCCTGCTGCCCTGAATGGAATGCAACCATGAAAAGGTTAACTGGTTGGAAGAGAGATGAAGTTAGAGGAAAATTACTTCCAGGGAAAATCTTCGGGGGTTTATGTCAACTGAAAGGTCAAGATACATTGACCAATTTTATGATTTCATTGTATAGAGGAATCAGTGGTCAAGATTCTGAGAAATTCTCATTTGGAGAATTTGTGGAGGTTTTCTTAACGGTGAACAAGAGGAATGATGCAGGTGGTAATATAATTGGCAGCTTCTGCTTCTTGCAGATTGTATCACCAGATCCAGATCTGCCCTTACAGAGACACAAGTCAGAGGGTAGGGTTAGCTTTTCTAAATTCAAGGAATTGAATCCTTTAAATGGAATGCGCTTCACCCACCAACTCTTGGAGAATACAACTGTCTCAGAAAATCAAAAACAATTTCTTGATACTAGCAATGCATGCGAGAGACAGATCCTGTCCATTATTGAGGACACAGATTTAGGCAGCTTTGACAAGGGCAGCACTTTGAAGCTAAACGTGGAAGAATTTCTACTGGGAAATATATTAGATGCTATTGTCAGTCATGTCATGATCTTGATAAGAGGAAAAAACTTGCAGCTGTTTCATGAAATTCCTGATGATATCAAGATGCTTATTCTATACAGCGATCAAATTAGGCTTCAGGTGGTCCTGTCTGACATCTTGCTTATTGTGGTGAACCATACACCATCTCCTAATGGCTGGGTAGAAATGAAGATAATACAAGATGGCAACGAGTTTATCCATACACAGTTCAGAATGACACATGCTGGTCGAGGTCTTCCTTTGCTGTTCTTCAGGATATGTTTGAAGCAGATAATCAATGAACTACTCAGGAAGGTCCAGGGCTGTATATGTCTCGGAAAATTCCTCAGTAGGATGAATGGTCGTGTTCACTATGTAAGAGAACATAACAAGTGCCACTTCCATATTGATCTTGAACTCAGAAGGAGAAAAGAAAGACAAAGCAATTTGCCAGCCAAGACAAGCATTTTAACTTAG 3237 0.4226 MLRFVFEDKAEPSEMSFSTSATSNMKFITNTANRDKTMAQHSADAVIFAEFGRSSVSGRSFDYSRSVLYPPQSVSEEKMTAYLSNIQRGGLIQPFGCMIAIEETTFRIISYSENCFDLLGLERHFDSKQFMGLIGVDIRTLFMPSSGASFAKAAASKEISLLNPIWVYSRTTQKPFYAILHRIHVGIVIDLEPARSSGHALSLAGAVQSQKLAVRAISRLQSLPGEILVCCDKVVEEVQKLTGYVRVMVYKFHEDDHGELKQNCARMICDCHAKPVKVIQSQQLRQPLCLVNSTLRSPHECHTQYMANMGSIASLVIAVIVNGSDTTKLWGLLVCHHTSPRHVPFPFRYACEFLMQAFGLQLYMEMLRASQMTEKRMLRTQTLLCDVLLRDAPLGVVTQSPSIMDLVKCDGAALCYGGDCYLLGTIPTESPIKDIAEWLLSDHGDSTGLSTDSLVEAGYPGAALLGNAVCGMATARINMRDYLFWFRSYAAKEVQWGGTKYHPEDKDDGGKMNPRSSFKAFLEVAKSKSLPWEASEIDAIHSLQLIVRESFQNTQNFGPKTLSYAQRSDTAMAGVHELSSVAFEMVRLIETATVPIFGVNSAGLIDGWNVKIAKLTGLQANEAMGKSLVNEIVHDDSRETVENILSRALRGQEDKNVELKLKHFGPHQQKVIYIIANACTSRDHRNAVVGVCIVGQDITYEKVFQNRFIKLEGDYKAIIQSLNPLIPPIFASDENACCPEWNATMKRLTGWKRDEVRGKLLPGKIFGGLCQLKGQDTLTNFMISLYRGISGQDSEKFSFGEFVEVFLTVNKRNDAGGNIIGSFCFLQIVSPDPDLPLQRHKSEGRVSFSKFKELNPLNGMRFTHQLLENTTVSENQKQFLDTSNACERQILSIIEDTDLGSFDKGSTLKLNVEEFLLGNILDAIVSHVMILIRGKNLQLFHEIPDDIKMLILYSDQIRLQVVLSDILLIVVNHTPSPNGWVEMKIIQDGNEFIHTQFRMTHAGRGLPLLFFRICLKQIINELLRKVQGCICLGKFLSRMNGRVHYVREHNKCHFHIDLELRRRKERQSNLPAKTSILT 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph4g0885 1078 CDD HisKA 853 896 IPR003661 GO:0000155|GO:0007165
Enph4g0885 1078 SUPERFAMILY GAF domain-like 207 363 - -
Enph4g0885 1078 SMART gaf_1 226 376 IPR003018 GO:0005515
Enph4g0885 1078 ProSiteProfiles PAS repeat profile. 581 652 IPR000014 -
Enph4g0885 1078 Gene3D PAS domain 583 702 - -
Enph4g0885 1078 Pfam PAS fold 584 698 IPR013767 GO:0006355
Enph4g0885 1078 Pfam PAS fold 714 827 IPR013767 GO:0006355
Enph4g0885 1078 SUPERFAMILY GAF domain-like 374 553 - -
Enph4g0885 1078 SUPERFAMILY PYP-like sensor domain (PAS domain) 728 826 IPR035965 -
Enph4g0885 1078 SUPERFAMILY PYP-like sensor domain (PAS domain) 86 196 IPR035965 -
Enph4g0885 1078 ProSiteProfiles Phytochrome chromophore attachment site domain profile. 226 356 IPR016132 -
Enph4g0885 1078 CDD PAS 592 698 IPR000014 -
Enph4g0885 1078 Pfam Phytochrome region 379 554 IPR013515 GO:0006355|GO:0009584
Enph4g0885 1078 ProSiteProfiles Histidine kinase domain profile. 855 1007 IPR005467 -
Enph4g0885 1078 Pfam PAS fold 81 194 IPR013654 GO:0006355
Enph4g0885 1078 NCBIfam PAS domain S-box protein 588 705 IPR000014 -
Enph4g0885 1078 FunFam Phytochrome 577 708 - -
Enph4g0885 1078 Pfam GAF domain 228 365 IPR003018 GO:0005515
Enph4g0885 1078 ProSitePatterns Phytochrome chromophore attachment site signature. 296 305 IPR013516 -
Enph4g0885 1078 ProSiteProfiles PAS repeat profile. 714 759 IPR000014 -
Enph4g0885 1078 PANTHER OS08G0260000 PROTEIN 78 901 - -
Enph4g0885 1078 SUPERFAMILY PYP-like sensor domain (PAS domain) 587 694 IPR035965 -
Enph4g0885 1078 Gene3D - 370 556 IPR043150 -
Enph4g0885 1078 PRINTS Phytochrome signature 696 716 IPR001294 GO:0006355|GO:0009584
Enph4g0885 1078 PRINTS Phytochrome signature 514 532 IPR001294 GO:0006355|GO:0009584
Enph4g0885 1078 PRINTS Phytochrome signature 241 260 IPR001294 GO:0006355|GO:0009584
Enph4g0885 1078 PRINTS Phytochrome signature 676 693 IPR001294 GO:0006355|GO:0009584
Enph4g0885 1078 PRINTS Phytochrome signature 584 600 IPR001294 GO:0006355|GO:0009584
Enph4g0885 1078 PRINTS Phytochrome signature 142 164 IPR001294 GO:0006355|GO:0009584
Enph4g0885 1078 PRINTS Phytochrome signature 603 618 IPR001294 GO:0006355|GO:0009584
Enph4g0885 1078 FunFam Phytochrome 371 501 - -
Enph4g0885 1078 Gene3D - 261 369 IPR029016 -
Enph4g0885 1078 Gene3D PAS domain 82 192 - -
Enph4g0885 1078 Gene3D - 193 260 IPR029016 -
Enph4g0885 1078 SMART pas_2 713 782 IPR000014 -
Enph4g0885 1078 SMART pas_2 583 650 IPR000014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph4g0885 Enph-Chr4 22452328 22457630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph4g0885 18 1061 Histidine Kinase Gene Family AT4G18130 55.166 0.0 1229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph4g0885 K12123 - gmx:100808192 1557.73