Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02333 ATGAATTTAGAAGGAAAAGTAGAAATGACAACACCTGGTTTTGTAGTTGTTTATGTCATTCTTCTTTTTGCTTTCACCAAAGGAGGCTCAGAGGGGAAAAGATGGAAACATGACGAGTTTTATACACATTATGTTGGAGATAAGGCAGAGGAGGTGTGGAAGTATTGTAGGAAAGAAATGATAGAGAGGAACAATGATATCAAAGAATTAGACTTGCATCTATTGGATGTAACAAGAGAAAAGAGATCTACTCTTGCAGTGGAAAATCATATACATATGAAACAACACTTTTTGGATTGCATAAGAAACAGAAATCTTCCTATTCCTGTTTCAGAAGAAGAAAGACATTTGTTGAAGAAGCATTATGAGTCCCTCTTTGGTTTAGCAGGTGGACATAGATATTTACTCTCAGAGTCACAACAAAATCAGACACCACAAAGCCCTGATTCTGTTTCCCCATTAAAACCGGAAAGTCGCGTTGCGGTACGAGTGACTTCTCCACCTCCAATTCCTGAGGTCTCATATGATGATTTGCCATTTGTATTGCCATCTCCTCCTCCTCGTGCTTTTGACCCAATAAATAATGGCAAACAAGAGAAAGTGATTATTGTTTCTATAGTTGCATCTGGAGCTATAATCTTAATAGGTTTATTCTTATGTTGTCGCGAGGTGAGGAAGAGCATGAGAGTTGACAAAGATGACAGGCCTTTACTCATATTAAGCTCAAGTGACTTGTCTGGTGGTATTTCACAAAAGTCTGTTGGTTTTGAAAATTCTGATATGAGAGAATATAGTATTAACTATGGAATGAATCCTTCTACTGTTAGGAATTCGTCCATTAAGCATGAAGAGAACAATGCCTCAATGGTTGAGATAACATCATCGGATGGAAAAGGACAAGTACCAGTGTCCTTATTGAAACTTCCTCCAGGAAAATCAGCACCCGAGGCTCCAACATTGccgcctcctccaccacctgctcttgcgcctcggcctccacctcctccAAGAATGGTTAGGCCTCCACCTGCTCCTCCCAAACCAATGGCTGGTAGAACCCAAAAATCACCTCTAGGACCGCTTCATTCTAGTGAGGATGCTGAGTCTGATGCTCCGAAACCGAAATTAAAGCCATTTTTCTGGGATAAGGTTGCGGCAAATCCTGATCAAGCTATGGTCTGGCATGAGATCAGAGCAGGGTCATTCCAGTTCAGTGAAGAAAAGATAGAGTCTTTATTTGGCTGCTCCAACCAGAACAGAATTGAAAGAAAAAAAGATTCTCCATCTTTAGAACCTTCTGTCCAGTACATTCAGATTATTGAACCCAAGAAAGCACAGAATTTATCAATTCTTTTACGTGCTCTGAATGTGAGCACAGAAGAAGTTATTGACGCCCTTAATGAAGGTAATGAGATTCCTGTTGAGCTCATCCAAACATTATTGAAGATGGCACCGACAATGGATGAGGAATTGAAGCTAAGGTTATTCACAGGTGCCGTTTCTCAACTTGGACCTGCAGAGAGGTTTCTCAAGGCCTTGGTTCATATTCCATTGGCTTTCAAACGTCTTGAGTCTCTGCTGTTCATGTTTACACTTCCGGAAGAAGCTTCAAGCATTAAGGAATGCTTTACCACATTAGAGGTTTCTTGCAATAAACTTAGAAAAAGCAGGCTCTTCCAAAAGCTATTAGAAGCAGTTCTAAAGACAGGAAACCGATTGAACGATGGCACATATCGTGGCGGTGCTCAAGCATTCAAGCTCGACACACTTTTGAAACTTGCAGATGTAAAAGGAACAGACAACAAAACCACACTGTTACACTTTGTGGTTCAAGAGATCATACGTTCAGAGGGCATAAGAGCTGTAAGAACAGCAAAAGCAAGCCAAAGCCATTCGAGTCTAAGCACTGAACTAGAAGATGTGAAAAAGGCGGCAGTAATAGACGGTGATGCTCTAACAGCTGCGGTGTTCAAACTTGATCAAGCAGTGGCGAAAACTGGAGAACTGTTGAACACTGATCTGAAGAATCTCGAAGAAGAAAGCGAGTTTCAACATTCACTTGCAACTTTTCTGGAGAAAGCAAAAGAAGAAGTGTCATGGTTGATAGGGGAAGAGAAGAGGATAATGGCTGCAGTTAAAAGCACTGCAGATTATTTTCATGGAAATGCAGGAAAAGACGAAGGGTTGCGTTTGTTTGTGATAGTACGAGATTTTTTGGTAATGTTGGACAAGGTGTGCAAAGAGGTAAAAGTATCAACAACAAAAACAGCAGCGGCAAAGGGttcttcttcttcttcttGCAAGAAAGAGGCTCCTTCTTCGTCATCCTCTCCGGATACTCATCAACAATCACCTTCTGATATGCATAGAAGACTATTTCCTGCCATAGCAGAGAGGAGAATACACGACTCTAGTTCCGATGACGATGACAGCGACGATGAGAGGTTACCAACGTAG 2457 0.3985 MNLEGKVEMTTPGFVVVYVILLFAFTKGGSEGKRWKHDEFYTHYVGDKAEEVWKYCRKEMIERNNDIKELDLHLLDVTREKRSTLAVENHIHMKQHFLDCIRNRNLPIPVSEEERHLLKKHYESLFGLAGGHRYLLSESQQNQTPQSPDSVSPLKPESRVAVRVTSPPPIPEVSYDDLPFVLPSPPPRAFDPINNGKQEKVIIVSIVASGAIILIGLFLCCREVRKSMRVDKDDRPLLILSSSDLSGGISQKSVGFENSDMREYSINYGMNPSTVRNSSIKHEENNASMVEITSSDGKGQVPVSLLKLPPGKSAPEAPTLPPPPPPALAPRPPPPPRMVRPPPAPPKPMAGRTQKSPLGPLHSSEDAESDAPKPKLKPFFWDKVAANPDQAMVWHEIRAGSFQFSEEKIESLFGCSNQNRIERKKDSPSLEPSVQYIQIIEPKKAQNLSILLRALNVSTEEVIDALNEGNEIPVELIQTLLKMAPTMDEELKLRLFTGAVSQLGPAERFLKALVHIPLAFKRLESLLFMFTLPEEASSIKECFTTLEVSCNKLRKSRLFQKLLEAVLKTGNRLNDGTYRGGAQAFKLDTLLKLADVKGTDNKTTLLHFVVQEIIRSEGIRAVRTAKASQSHSSLSTELEDVKKAAVIDGDALTAAVFKLDQAVAKTGELLNTDLKNLEEESEFQHSLATFLEKAKEEVSWLIGEEKRIMAAVKSTADYFHGNAGKDEGLRLFVIVRDFLVMLDKVCKEVKVSTTKTAAAKGSSSSSCKKEAPSSSSSPDTHQQSPSDMHRRLFPAIAERRIHDSSSDDDDSDDERLPT 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02333 818 MobiDBLite consensus disorder prediction 314 350 - -
Car01g02333 818 MobiDBLite consensus disorder prediction 757 818 - -
Car01g02333 818 MobiDBLite consensus disorder prediction 292 374 - -
Car01g02333 818 MobiDBLite consensus disorder prediction 792 806 - -
Car01g02333 818 ProSiteProfiles Formin homology-2 (FH2) domain profile. 366 768 IPR015425 -
Car01g02333 818 MobiDBLite consensus disorder prediction 139 158 - -
Car01g02333 818 MobiDBLite consensus disorder prediction 139 153 - -
Car01g02333 818 Pfam Formin Homology 2 Domain 368 742 IPR015425 -
Car01g02333 818 MobiDBLite consensus disorder prediction 757 783 - -
Car01g02333 818 Gene3D Formin, FH2 domain 372 777 IPR042201 -
Car01g02333 818 SUPERFAMILY Formin homology 2 domain (FH2 domain) 321 751 - -
Car01g02333 818 PANTHER FORMIN-LIKE PROTEIN 8 636 - -
Car01g02333 818 PANTHER FORMIN-LIKE PROTEIN 632 811 - -
Car01g02333 818 PANTHER FORMIN-RELATED 8 636 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Car01g02333 818 PANTHER FORMIN-RELATED 632 811 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Car01g02333 818 SMART it6_source 366 757 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02333 Car-Chr1 49109478 49113580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02333 343 801 FH2 protein (formin) Gene Family AT5G54650 57.551 6.85e-179 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02333 - - lja:Lj3g3v2888350.1 783.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02333 01 49109478 49113580 Car01g02333 01 49109478 49113580 ECH