Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00940 ATGGCTTGTTTGAGCGATGAGAGCAGGGTTCCTCTTCCCCAAGTCAAAATGATACCAGCAAGCTTGCCTCTTCCTGCTCAACTGCCAGATGAGCAAGATGAACACAAGCCTTTCAATTTCGACTCCTTCTCTATTGCCCATCGCTTGGAGAAGGTTTTCCCCGTTTATGCTATGGGAACTCCCAACCCTGATTCCGACTCTGTTTTGCCATCTTACTTTGGCAATTCCAACTGTGCTGACCCAATTTGGGATGCTGTCAGGGAAGAAGCTAAGTTGGAGGCAGAGAGGGAGCCAATTTTAAGTAGTTTCTTGTATGCGAGTATCTTATCACATGATTGCTTGGAGCAAGCATTGGCGTTTGTTCTTGCTAATCGTCTTCAAAATCCTACTCTTTTGGCAACTCAGCTCACAGATATATTTTGTGATGTAATGCTGCATGACAAGGGCATTCAGCGATCTATTCGCCTAGATGTTCAGGCATTTAAAGACAGAGATCCTGCTTGTTTGTCATATTGCTCGGCACTTTTGTATATGAAGGGTTACCATTCTCTGCAAGTGCATCGAGTAGCCCATGCATTGTGGGGCCAGGGACGCAAAGTCTTGGCTTCCGCTCTACAAAGTCGGGTTAGCGAGGTTTTTGGTGTTGACATACATCCTGCGGCGAAAATTGGGGAGGGAATTCTTTTAGATCATGGGACGGGCGTGGTTATTGGAGAAACGGCTATTGTAGGAAACAGAGTTTCATTGATGCATGTGAGGTGTAACTTTGGAGGCACAGGAAAAGAAATAGGTGATCGCCATCCCAAAGTAGGTGAAGGTGCATTGATAGGAGCTAGTGCAACCATACTTGGGAATATAAGAATTGGTGAAGGTGCGATGATAGCTGCTGGCTCCCTTGTGTTAAAAGAGGTCCCTCCCCACAGcATGGTGGCAGGAACACCAGCAACCGTTATTGGTTATCTACATGAGCATGACCCATCTTTAACCATGAAGCATGATGCTACAAaagattttttcaaaaatatagcAGCTATTTA 1037 0.4474 MACLSDESRVPLPQVKMIPASLPLPAQLPDEQDEHKPFNFDSFSIAHRLEKVFPVYAMGTPNPDSDSVLPSYFGNSNCADPIWDAVREEAKLEAEREPILSSFLYASILSHDCLEQALAFVLANRLQNPTLLATQLTDIFCDVMLHDKGIQRSIRLDVQAFKDRDPACLSYCSALLYMKGYHSLQVHRVAHALWGQGRKVLASALQSRVSEVFGVDIHPAAKIGEGILLDHGTGVVIGETAIVGNRVSLMHVRCNFGGTGKEIGDRHPKVGEGALIGASATILGNIRIGEGAMIAAGSLVLKEVPPHSMVAGTPATVIGYLHEHDPSLTMKHDATKDFFKNIAAI 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00940 345 Pfam Serine acetyltransferase, N-terminal 82 185 IPR010493 GO:0005737|GO:0006535|GO:0009001
Bva08g00940 345 Gene3D serine acetyltransferase, domain 1 69 215 IPR042122 -
Bva08g00940 345 CDD LbH_SAT 213 314 IPR045304 -
Bva08g00940 345 PANTHER SERINE ACETYLTRANSFERASE 40 342 - -
Bva08g00940 345 PANTHER SERINE ACETYLTRANSFERASE 2-RELATED 40 342 - -
Bva08g00940 345 Gene3D Hexapeptide repeat proteins 216 343 - -
Bva08g00940 345 Pfam Bacterial transferase hexapeptide (six repeats) 267 300 IPR001451 -
Bva08g00940 345 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 276 304 IPR018357 GO:0016740
Bva08g00940 345 SUPERFAMILY Trimeric LpxA-like enzymes 81 331 IPR011004 -
Bva08g00940 345 SMART SATase_N_2_a 82 186 IPR010493 GO:0005737|GO:0006535|GO:0009001
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00940 Bva-Chr8 4764594 4768694 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00940 49 343 Miscellaneous Gene Families AT2G17640 72.054 5.66e-146 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00940 K00640 - jre:109014129 511.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00940 08 4764594 4768694 Bva11g01416 11 13951138 13954692 BWGD
Bva08g00940 08 4764594 4768694 Bva08g00940 08 4764594 4768694 ECH