Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01275 ATGGCTGAAGATTGTGTGGGAAACACAGTGTCAACCTCTTCTTCAAGCCCATTAAACTGGTGGGACGTCCATGCAagttctctttcttcatgGAGTAACGCTAACAACTCATGGAGCAACCAACCAAACCCtaattcttcatcttcttgtgAGGATGAGATATCGGTTTCTACATCTTTCACTATTGCATCCAACCTCTCGAACCTCACCGTTGAGCCCTCTTGCAGGCTTGTTGAGCCTTCATTTTCGTCTAAGGAGTTGATGGGAGAGCAAGCTTCTGCTGATAATCAACTTTGGAACCATCTTCTATTGGGTGTTGGAGGCAATGAAGAACTTCACAACAATCAAGTAGTTGGTGAGAATTTCCTTGATTCACTATCATCTAAAAGCTTGACAAATTCTATGTTTGAACCAACCTGCGACTACTTGAAGAAACTAAATACCAGTTGGGAATATAATAACTCAACATCTTCCAATAGCTTTCAGAATCACTTAAATGGGTTCAGTGAGGCTAtgatagaaaatgaaagattaaaaaagttatctaATCTTGTAAACACTTGGTCTATTGCCCCTCCAGCCCCAGAAGCCAATAGCCAGATTGAACCACATACAACATCATTTGATAATTACTCACAATCTAATCCTAGAAATTCTAGGATTTTTCCCGGCTATGGACATGACATGAAGGTCAGGCAAGAACATCATGCAAATCCAGTCAATGGAGTTCTATCTGGGAGATCATATAATAGCATGGGGCATCAACAGGGATTCCAGAGCCCTTTGATGGGAGACAATGATAAACTTTTCAATGGAATGCCCGCCATTATATCGTTAAACAATCGCGTTGGAAGGCCACTAATTGGAAATCATGGACATAAACCCAGCATGAATTCCATTAATATATCCAAGCTTAAGAAACAAGATCTCCAGACATCTTCACCGACAAGAACTAATAGTGAAAGAGAGCAAGGAAGAACAGGTGAATCAAAGAGGAAAGAATCTGAAGACTCTTCAGAAGCAATCTTAAAGAAGCCTAAGGAAGATACATCTACAGCTTCACCAACAAAGGTGCAGGCACCCAAAGTCAAGCTAGGGGACAAGATCACTACCCTTCAACAAATTGTGTCGCCATTTGGAAAGaCAGATACAGCATCGGTGCTCTTTGAAACAATTAActacataaaatttcttcaagaaCAAGTCCAGCTAATGATCAATCCTTACTTGAAGAGTAACTCACACAAGGATCCATGGGGAAGCTTGGACAGAAAAGACAAGGGAGACGCAATGCTTGACCTTAGGAGCAGAGGACTTTGTTTAGTTCCTATTTCATGCACACCTCAAGTTTACAGAGACAACAGTGGACCAGACTACTGGAGACCTGCATACAGAGGATGTTTGTATAGGTG 1412 0.3938 MAEDCVGNTVSTSSSSPLNWWDVHASSLSSWSNANNSWSNQPNPNSSSSCEDEISVSTSFTIASNLSNLTVEPSCRLVEPSFSSKELMGEQASADNQLWNHLLLGVGGNEELHNNQVVGENFLDSLSSKSLTNSMFEPTCDYLKKLNTSWEYNNSTSSNSFQNHLNGFSEAMIENERLKKLSNLVNTWSIAPPAPEANSQIEPHTTSFDNYSQSNPRNSRIFPGYGHDMKVRQEHHANPVNGVLSGRSYNSMGHQQGFQSPLMGDNDKLFNGMPAIISLNNRVGRPLIGNHGHKPSMNSINISKLKKQDLQTSSPTRTNSEREQGRTGESKRKESEDSSEAILKKPKEDTSTASPTKVQAPKVKLGDKITTLQQIVSPFGKTDTASVLFETINYIKFLQEQVQVAIKTDQFQDPWGSLDRKDKGDAMLDLRSRGLCLVPISCTPQVYRDNSGPDYWRPAYRGCLYR 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01275 466 CDD bHLH_AtbHLH_like 364 404 IPR045239 -
Bva01g01275 466 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 364 406 IPR036638 GO:0046983
Bva01g01275 466 MobiDBLite consensus disorder prediction 322 351 - -
Bva01g01275 466 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 349 398 IPR011598 GO:0046983
Bva01g01275 466 PANTHER TRANSCRIPTION FACTOR BHLH111 32 452 - -
Bva01g01275 466 MobiDBLite consensus disorder prediction 294 321 - -
Bva01g01275 466 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 32 452 - -
Bva01g01275 466 MobiDBLite consensus disorder prediction 287 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01275 Bva-Chr1 13599425 13602690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01275 20 466 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G31050 35.381 2.28e-49 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01275 - - aprc:113873522 556.599