Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00179 ATGGGGGTGGACGAGATGCAGAACCACGCCGTTGAACAAGAGGGAACGACGGCGACGGGCGAAGAGGTTCTAGACGGCGTCGTTTTGTTCGGGAAGTATGCGCTGCTGAAGGTGCTCGGATACGGTGCGTTTGGCAAGGTGTACCAGGCCAAGAATCTGGAAACGGGACAGAGCGTGGCGATTAAGGTGGTCAGCAAGAACAAGGTGGTTAAAAAAGGTCTGGCGGCGCAAATTGAGAGGGAAATCGCTATCATGCACCAGTTGCGTCATCCGCACATCATCGAGCTCTTCGAGGTGCTCGCTACCAAAACCAAGATTTACTTCGTTATGGAGTTCGCCAATGGAGGGGAGCTCTTTCACAAGGTCAAGAAAGGACGCTTTTCCGAAGATCTCAGCCGTCGATATTTCCAGCAGTTATTATCGGCCGTTAAATACTGCCACTCTATAGGGGTATACCACCGGGATCTAAAGCTGGACAATCTCTTAATCGACGAGAACATGAAGCTCAAGGTTACGGACTTCGGACTCGGTGCGGTCAAGGACCAAACCCGACCCGATGGGTTGCTCCATACCGTTTGCGGGACCCCGGCTTACGTGGCACCCGAGATTCTCGCGAAGAAAGGTTACGATGGGGCGAAGGTCGATGTATGGTCATGCGGCGTCATCTTGTTCGTGCTCACCGCCGGTTACCTGCCGTTCAACGACCAGAACATCGCCGTCATGTACCGGAAGATCTGCCGAGGCCAGTTTCGGTTGCCGAGATGGACGTCTCCCGATCTGCGACGCTTCATATCCCGGATGCTTGACACGAATCCCGAGAGCAGGATCACCGTCGATGAGATCCTCCGGGACCCGTGGTTCCTCAAAGGTTATAGAGAGGTTCAGTGCAGTAAACTCCGGCATTGGACGGAACCGGAGGAGAATGAGAGAAGAAAGTCGTTGAATGCGTTTGACTTGATTTCCTTCTCGTCCTGTTTGGACATGTCAGGTTTGTTCGGTGAACCCGAAGTTTCGGATTCAGTGGAACGAATCGTTTCGGAGGAGACGCCGGAGAGAATAATGGAGAAGGTGGTGGAGATGGCCACGGCGGAGAGAGTAAGAGTGAAGAGGAATACGAATGGCTGTGGAGGAGCTAGACTAGAGGGTCAAGATggtaatttagtaattatatTAGGAATCTATCGGTTAACGGATGAACTAGTTATGGTTGAGATACATAAAAGGGAAACCAAAGATGGAGGTAGTGCACAATTCTGGAAACATAAGCTGAGGCCACAACTTCTTCAATTCGTGTATAAACCGGAAGCAATAATCTCCGGTGATTCCAAGTA 1331 0.5094 MGVDEMQNHAVEQEGTTATGEEVLDGVVLFGKYALLKVLGYGAFGKVYQAKNLETGQSVAIKVVSKNKVVKKGLAAQIEREIAIMHQLRHPHIIELFEVLATKTKIYFVMEFANGGELFHKVKKGRFSEDLSRRYFQQLLSAVKYCHSIGVYHRDLKLDNLLIDENMKLKVTDFGLGAVKDQTRPDGLLHTVCGTPAYVAPEILAKKGYDGAKVDVWSCGVILFVLTAGYLPFNDQNIAVMYRKICRGQFRLPRWTSPDLRRFISRMLDTNPESRITVDEILRDPWFLKGYREVQCSKLRHWTEPEENERRKSLNAFDLISFSSCLDMSGLFGEPEVSDSVERIVSEETPERIMEKVVEMATAERVRVKRNTNGCGGARLEGQDGNLVIILGIYRLTDELVMVEIHKRETKDGGSAQFWKHKLRPQLLQFVYKPEAIISGDSK 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00179 443 PANTHER - 17 437 - -
Bva01g00179 443 Pfam NAF domain 312 369 IPR004041 GO:0007165
Bva01g00179 443 Gene3D Kinase associated domain 1, KA1 310 433 - -
Bva01g00179 443 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 14 17 437 - -
Bva01g00179 443 ProSiteProfiles Protein kinase domain profile. 33 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00179 443 ProSiteProfiles NAF domain profile. 309 333 IPR018451 GO:0007165
Bva01g00179 443 SUPERFAMILY Protein kinase-like (PK-like) 29 321 IPR011009 -
Bva01g00179 443 Pfam Protein kinase domain 33 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00179 443 ProSitePatterns Protein kinases ATP-binding region signature. 39 72 IPR017441 GO:0005524
Bva01g00179 443 Gene3D Transferase(Phosphotransferase) domain 1 113 293 - -
Bva01g00179 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Bva01g00179 443 Gene3D Phosphorylase Kinase; domain 1 23 112 - -
Bva01g00179 443 SMART serkin_6 33 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00179 443 CDD CIPK_C 315 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00179 Bva-Chr1 1446825 1448248 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00179 28 429 CBL-interacting serine-threonine protein kinases AT2G30360 57.767 5.95e-166 472
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Bva01g00179 Pkinase 6.4e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00179 - K12761 qlo:115953426 553.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00179 01 1446825 1448248 Bva01g00179 01 1446825 1448248 ECH