Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00663 ATGCCGATGTCGCTGCCGCGGCGGCCTGGTAGAGGGGAAGAGGAAGGTCAAAGCAATGTCACATTATTGTCTTCCCCAACTTCCATGGAAAGTGTTTGCCGAAACAACCCAGAATTAAAAGAACGCAATTACATGGGGTTATCTGATTGTTCTTCTGGGGACAGCTCATTGCCGTCTTCATCAGAAGAGAATAAAAGCAATATGAACCTGAAAGCAACGGAACTCAGGCTTGGGCTTCCCGGATCTCAATCTCCTGAAAGGAAATCCGATCTCTGCTTAAAAACCTCAACTCAATTGGATGAGAGACCTTTGTTTCCTATGCGTCCTTCAACTGATGATAACCATTCATCATCGAAGACTGCTGTTTTGGGTAACAAAAGAGGTTTTTCTGATGCTATGAATGGGTTCTCAGAGGGGAAATTTCTAGTTGATTCCGAGGTCAATACTATATTGTCACCCAGGCCTACACCTAATTTAGGATTGAAAACTAGTTCTATGCTTGAGAACCTTGGGACTCAGCAAGTCAAAGCAAAAGAAGTACCACCGACAATGGTGGCAGATGAGAGGCCTCACGTCAATGAAAGTAGACCAAATCTTCAAGGTTCTGCAACTGCTAATAGCAGCGCACCAGCAACCAAGACGCAGGTTGTGGGTTGGCCGCCTATAAGATCATTTAGGAAAAATTCTTTGGCCACTACTTCAAAAAACAATGAAGAAGTGAACGGAAAAGCGGGGTCTGGTGCACTGTTCATCAAGGTCAGTATGGATGGTGCTCCATATTTAAGGAAAGTAGACCTGAGGAATTATTTTGCTTATCCAGAATTTTCTTCTGCTCTTGAGAAGATGTTCAGCTGTTTCACCATACGTCAATGTGGATCTCATGGAACTCTGGGTAGGGAGATGATGAATGAAAGCAAGCTGAAAGATCTACTTCATGGGTCAGAATATGTTCTTACTTACGAGGACAAAGATGGAGACTGGATGCTTGTTGGCGATGTTCCCTGGGAGATGTTTATTGATACATGCAGGAGGCTGAGGATCATGAAAAGTTCCGATGCCATCGGACTAGCTCCCAGGGCTGTGGAAAAAAGCAAGAGCAGGAACTGGGCAGCATTACCAAGTCGTTAA 1128 0.445 MPMSLPRRPGRGEEEGQSNVTLLSSPTSMESVCRNNPELKERNYMGLSDCSSGDSSLPSSSEENKSNMNLKATELRLGLPGSQSPERKSDLCLKTSTQLDERPLFPMRPSTDDNHSSSKTAVLGNKRGFSDAMNGFSEGKFLVDSEVNTILSPRPTPNLGLKTSSMLENLGTQQVKAKEVPPTMVADERPHVNESRPNLQGSATANSSAPATKTQVVGWPPIRSFRKNSLATTSKNNEEVNGKAGSGALFIKVSMDGAPYLRKVDLRNYFAYPEFSSALEKMFSCFTIRQCGSHGTLGREMMNESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDTCRRLRIMKSSDAIGLAPRAVEKSKSRNWAALPSR 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00663 375 ProSiteProfiles PB1 domain profile. 248 350 IPR000270 GO:0005515
Bach12g00663 375 MobiDBLite consensus disorder prediction 48 66 - -
Bach12g00663 375 FunFam Auxin-responsive protein 243 360 - -
Bach12g00663 375 MobiDBLite consensus disorder prediction 192 213 - -
Bach12g00663 375 MobiDBLite consensus disorder prediction 195 213 - -
Bach12g00663 375 Gene3D - 243 362 - -
Bach12g00663 375 MobiDBLite consensus disorder prediction 17 34 - -
Bach12g00663 375 MobiDBLite consensus disorder prediction 1 66 - -
Bach12g00663 375 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 68 355 IPR003311 GO:0005634|GO:0006355
Bach12g00663 375 SUPERFAMILY CAD & PB1 domains 245 349 - -
Bach12g00663 375 Pfam AUX/IAA family 73 359 IPR033389 -
Bach12g00663 375 MobiDBLite consensus disorder prediction 102 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00663 Bach-Chr12 4575261 4577767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00663 157 353 B3 DNA Binding Superfamily AT5G20730 25.472 4.11e-07 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bach12g00663 AUX_IAA 6.6e-90 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00663 K14484 - qsa:O6P43_015419 547.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00663 12 4575261 4577767 Bach12g00663 12 4575261 4577767 ECH