Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1255 ATGCCTCACCTCCTACATGGGACGCTTAAAGTAACCATAGTTGAAGTTGATAGACTACATACTGGATGTAATTTCGATTTCTGCCGGAAGGTACGTAAACACATGATGAAGATTGTTGGAACAAGACTGTATGCAACGGTTGATTTAGATAAGGCAAGGGTTGGAAGAACCAGAATGATTGGAAATCAGCCCTCAAACCCAAAGTGGAATGAGACCTTTGAAATCTATTGTGCCCATCACATCTCATACATTATATTCACTGTGAAAGATGGTAACCCAATTGGGGCAACTCTAATTGGAAGAGCTTTTGTCCCTGTTGAACAAGTTATTAAGGGCCCTATAGTTAATAGGTGGGTTGAAATATTAGATGATGAAGATCACCGTGCTGTGCCAGGTCATTCTAAAATTCGTGTCACCATACATTTCAACAGTGTTACCGAGGATAAAACATGTCTATGGTCTAAGGGCATAAGCATGCCATTTTATGGAGTTCCTCGTACATTTTTCAACCAAAGAGAAGGTTGTAGTGTTACTTTATACCAAGATGCTCATGTTCCTCGTGGACCTGTCCCATGGATTCCAATATCTAGAGAAATAGATTATATACCTGCAAGATGTTGGGAGGACATTTACATTGCTATTAATGATGCTAAGCACTTTATTTACATAGCTGGTTGGTCTATTTACACTGAAATAAGCTTAGTTAGGGACGATGACAAATTAAATGATACCCTTGGGGAGTTGCTAAAGAAGAAAGCTGAAGATGGTGTTAATGTTCTTATGCTTGTTTGGGATGATAGAACATCTGATGCTAATTTCAAGCTAGCTGGGTTGATGGGAACCCATGATGAGGAAACTGCAAATTACTTCAGAAACACACGTGTGCATTGTGTTTTGTGCCCACGAAACCCGGATTTTGGAAGAAGCATAATTCAAGGTTTTCAAATCTCAACCATGTTTACTCATCACCAAAAGAGTGTAGTAGTTGATGCGCCTGTTATAGGATCAGAGAAACGAAGCGTCAAAAGTTTCATAGGTGGGATTGATCTGTGTGATGGGAGATATGATACTAGAGAACACCCTCTATTTTCAACCTTAAATACAGTTCATAGTAATGATTTTCACCAGCCAAATTTCCCAAATGCTTCCATCAGAAAAGGTGGTCCAAGAGAGCCATGGCATGACATTCACTGTAGGCTAGAAGGACCTATTGCTTGGGATGTCTTGTACAATTTTGAGCAAAGATGGGAGAAGCAAGTTGGAAAGAAATTTCTTTTCTCACTTGATGAGATTGATGAAATTCTAGTCCATCCATCTGAAGCAACGAAATCTGAAGAAACTTGGACTGTTCAGTTGTTTAGATCCATTGATGGTGGTGCTGTTACTGGCTTTCCTCAAGCGCCAGATGATGTTGTTGAATTAGGCCTTGTTAGTGGGAAAGATAACATCGTTGATAGGAGCATTCAGGATGCTTACATAAATGCTATTAGAAGAGCAAGAAATTTCATCTACATTGAAAATCAGTATTTTATAGGGAGTTCATATGGTTGGAAAGCAACTGATAATGATATTATAGTTGAGGACATTGGTGCATTGAATCTTATACCAAAGGAGTTGTCATTGAAGATTATTAGTAAGATAGAAGCAGGAGAAAGGTTTGCTGTGTATGTAGTGATCCCAATGTGGCCTGAAGGAGAACCAGAAAGTGATTCAGTTCAAGCAATATTAGATTGGCAAAGGAGAACAATGGAGATGATGTATTCTGACATTGCTGAAGCCATAACGAAAAAGGGAATTGAAGCACACCCTCGAGATTATTTGACATTTTTTTGCCTTGGCAAGAGGGAGCACAAAGATACAGGAGAATATCCTCCTCCAGAGGAACCAGAGCAGGATAGTGACTACAGAAGAGCACAAAATGCTAGAAGGTTCATGATCTATGTTCATTCCAAGATGATGATAGTTGATGATGAATACATAATCATTGGATCTGCCAACATAAATCAGAGGTCAATGGAGGGAGCAAGAGACACTGAGATTGCAATGGGTGCATTCCAACCACATCATCTAACATCATATGGGCCACCAAGAGGAGAGATACATAGATTTCGACGTGCACTATGGTATGAGCACCTTGGGAGTGATAATACTAACACAAACATCTTTGACAATCCAGAAAGTTTGGACTGCATTGGTCTTGTGAATGCACTTGCTCATATCAACTTGGACATGTACTCAAAAGAAGAATTTGATGAATATAGACCATTTCACCACCTAATGAGATACCCCATAGAAGTAACCAACGAAGGAGCCATAACAACCCTTCAAGGCCTTGAATATTTTCCTGACACCAAGGCTCGGATTTTGGGCTGCAAATCAAATATCTTACCTCCAATTCTCACCACCTAG 2409 0.3968 MPHLLHGTLKVTIVEVDRLHTGCNFDFCRKVRKHMMKIVGTRLYATVDLDKARVGRTRMIGNQPSNPKWNETFEIYCAHHISYIIFTVKDGNPIGATLIGRAFVPVEQVIKGPIVNRWVEILDDEDHRAVPGHSKIRVTIHFNSVTEDKTCLWSKGISMPFYGVPRTFFNQREGCSVTLYQDAHVPRGPVPWIPISREIDYIPARCWEDIYIAINDAKHFIYIAGWSIYTEISLVRDDDKLNDTLGELLKKKAEDGVNVLMLVWDDRTSDANFKLAGLMGTHDEETANYFRNTRVHCVLCPRNPDFGRSIIQGFQISTMFTHHQKSVVVDAPVIGSEKRSVKSFIGGIDLCDGRYDTREHPLFSTLNTVHSNDFHQPNFPNASIRKGGPREPWHDIHCRLEGPIAWDVLYNFEQRWEKQVGKKFLFSLDEIDEILVHPSEATKSEETWTVQLFRSIDGGAVTGFPQAPDDVVELGLVSGKDNIVDRSIQDAYINAIRRARNFIYIENQYFIGSSYGWKATDNDIIVEDIGALNLIPKELSLKIISKIEAGERFAVYVVIPMWPEGEPESDSVQAILDWQRRTMEMMYSDIAEAITKKGIEAHPRDYLTFFCLGKREHKDTGEYPPPEEPEQDSDYRRAQNARRFMIYVHSKMMIVDDEYIIIGSANINQRSMEGARDTEIAMGAFQPHHLTSYGPPRGEIHRFRRALWYEHLGSDNTNTNIFDNPESLDCIGLVNALAHINLDMYSKEEFDEYRPFHHLMRYPIEVTNEGAITTLQGLEYFPDTKARILGCKSNILPPILTT* 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1255 802 PANTHER PHOSPHOLIPASE D 2 802 IPR015679 -
Apr5g1255 802 Pfam C2 domain 7 120 IPR000008 -
Apr5g1255 802 Gene3D Endonuclease Chain A 197 445 - -
Apr5g1255 802 PANTHER PHOSPHOLIPASE D ALPHA 3 2 802 - -
Apr5g1255 802 CDD C2_plant_PLD 1 142 - -
Apr5g1255 802 Pfam Phospholipase D Active site motif 318 354 IPR001736 GO:0003824
Apr5g1255 802 Pfam Phospholipase D Active site motif 645 671 IPR001736 GO:0003824
Apr5g1255 802 Gene3D C2 domain 3 145 IPR035892 -
Apr5g1255 802 SMART C2_3c 8 118 IPR000008 -
Apr5g1255 802 SUPERFAMILY Phospholipase D/nuclease 476 714 - -
Apr5g1255 802 Gene3D Endonuclease Chain A 459 688 - -
Apr5g1255 802 SUPERFAMILY Phospholipase D/nuclease 164 426 - -
Apr5g1255 802 SMART pld_4 318 354 IPR001736 GO:0003824
Apr5g1255 802 SMART pld_4 644 671 IPR001736 GO:0003824
Apr5g1255 802 PIRSF PLD_plant 1 802 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Apr5g1255 802 Pfam Phospholipase D C terminal 720 792 IPR024632 -
Apr5g1255 802 CDD PLDc_pPLD_like_1 201 368 - -
Apr5g1255 802 ProSiteProfiles C2 domain profile. 1 119 IPR000008 -
Apr5g1255 802 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 318 354 IPR001736 GO:0003824
Apr5g1255 802 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 143 IPR035892 -
Apr5g1255 802 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 644 671 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1255 Apr-Chr5 16927354 16932055 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1255 3 802 Phospholipase D Gene Family (Wang group) AT3G15730 63.647 0.0 1027
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1255 K01115 - gmx:100794115 1285.4