Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02099 ATGGACAATGATGAGGGTCGTAATAAATCATCAAAGGTGAACAAGGAAGAGGATGACAAGATGAGGACAAATGTAGCAAATGTTGCTGCTAGTGCTGCTGTTGGGGGAGACGACATGCTCTCAAAGTGGCAACCTATGGCCGAGCAAGCCAGGCAGAAACGTGAAGGCGTGGACACGTCATCTGGTTCTCAACCAGCTAAAGATGTAGGTCGCAAATCTTCTGCATCTGGGAAAAGTACTAAAGATAATCACGAAGGGGACAAAAAAGGTTCTACTAATTTTACAACTTCAGGTGGACATGTTGGTGAATATTACAGTTTCTTGTTCAATAGCAAGATAATAGAAGGTTCTTCAGTCTATGCCAGCGCTATAGCCAACAGGGTGATTGATGTTATAGACACTCAGTATGCAGCAGCAGTTCCACATACAAGTAGCTATTAG 441 0.4331 MDNDEGRNKSSKVNKEEDDKMRTNVANVAASAAVGGDDMLSKWQPMAEQARQKREGVDTSSGSQPAKDVGRKSSASGKSTKDNHEGDKKGSTNFTTSGGHVGEYYSFLFNSKIIEGSSVYASAIANRVIDVIDTQYAAAVPHTSSY 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02099 146 Pfam Transcription initiation factor TFIID component TAF4 family 3 98 IPR007900 GO:0005669|GO:0006352
Aip07g02099 146 MobiDBLite consensus disorder prediction 74 89 - -
Aip07g02099 146 MobiDBLite consensus disorder prediction 1 100 - -
Aip07g02099 146 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4 2 96 IPR045144 GO:0005669|GO:0006352
Aip07g02099 146 PANTHER IP01149P-RELATED 2 96 - -
Aip07g02099 146 MobiDBLite consensus disorder prediction 1 23 - -
Aip07g02099 146 MobiDBLite consensus disorder prediction 56 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02099 Aip-Chr7 68356943 68357817 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02099 96 143 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31210 62.500 4.43e-17 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02099 K03129 - aip:110264611 163.31