Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g03152 ATGGCAGACATATTATCTGAGTATGACATTACTATTATGGACTATCCGCGGCACTACGAGGGTTGTCCTGTGCTCAAGATGGAGCTCATTCACCATTTCTTAAGGTCTGGTGAGAGTTGGCTCTCTCTTGGGCAGCACAATGTGTTGTTAATGCATTGTGAGCGCGGAGGTTGGCCTGTTTTGGCCTTTATGCTAGCTGCATTGTTGATTTTTCGGAAGCTTTATACTGGGGAGCAACGGACTTTGGATATGGTGTATAAGCAGTCTCCCCGCGAGCTTTTACATTTGCTGACACCCTTGAATCCGATCCCTTCGCAGCTGAGGTATCTGCAGTATGTTTCAAGAAGGAATGTGGCCATAGATTGGCCACCGTTGGACAGGGCGCTCATGTTGGACTGCATCATCCTTAGATTCATCCCCAATTTCGATGGAGAAGGAGGCTGCCATCCCTTGTTTAGAATTTATGGGCAGGACCCTTTTAGTGGAGACAAGAATCCGAAAATGTTGTACTCAACGCCCAAGAGAAGCAAGAATATCCGGTGTTACAAGCAGGGAGAGAGTGAACTAATTAAGATTGATATCAGTTGCCATATTCAAGGTGATGTTGTGGTTGAGAGCACTAACTTGAACGCTGATATGGAGCAAGAAATGATGATGTTCCGAGTAATGTTCAACACTGCTTTTGTTAGATCTAATATTATGATGCTTAACCGGGATGAAGTTGACATTTTATGGGATGGTAAAGATCACTTTCCAAAGGATTTCAGAGCCGAGATCCTTTTCTCAGAAATGGATGCTGCTGCAGCTGTTATGGTGGATCGCACCTCATGCTTTGAGGAGAAGGAAGGACTGCCAGTGGAAGCATTTGCCAAGGTTCAAGAGATTTTTAACTATGTGGACTGGTTGGACCCCAATGCAGATGCTGCACTAAATGTTCTCCAACAGATGACTGCTTCGGCTATCATTAACGACAAGTTGGATACAGTTTCTGATCAGCATGGAGAAATGGGCACAATGCCTCAGGGGAAAATGAGTAAGCAATCCCCGGAAAATGAGAAGAGTAAAAAAGGTGACATGGCCAGCAAAGTTGATGCTACTCCAAAGGCATCTGATATTTCTTATTTGCCTGGTTCTATGGATGCTTCTTTTTCCCCAGAAACACCTCCTTTACGGCCTGCCCGAACTAGATTAGGCAAAGCATTTCATGATTCTCTTCCCCATACAGAAGTCAGTCATCAACTTATTGATGAAACTGAAGCCCAATTACAAGATAGAAGTCCGTCATCTATTTCTAGGTTTGCACCTGAGAGTCAATCGTCACCTACCTCTTGTAGTAAGTCACCAACTGATACCATCACCCTGGCTTCAAATTCAGGTATTACTTCAGTTCAGCCACCCCCTGCACTTTCTCCCAGAACACCGTTGAAGGAGATTCCACCTGTAAAAACAAGACTCGAGTCATTCTCACCGCCTCCACCCCCTCTTCCTCCTACTCCTCCTCCAAAGGATCATAAACCAGCTATAGTTAGATCTCCTCCACCTCCGCCACGTCCTTCAAATAACGATCTACATGTTATAGAAGGAGCCCCTCCTCCAGCATCACCTGCTTTAAAGGAAGAGCCACAGATAAAAGCTAGACACCCTCCTCCTCCTCCTCCTCCTCCTCCGCCTCCTGCAAAGGATGATTCACAGGTTAGAGCTAGATCCCCTCCACCACTGCCACCTCCTTGTCTCTCTGTCAAAGCTGAAGCTCCTAGTACACCATCAGCAGCACCACCGCCGCCGCCGCCACCGCCACCATCTGCATCATTTCCCTCCAATAAGCCTAATCCTTCTGTCCCAGCTGCTCCTCCACCTCCTTCTGCACCAGCTGCCCCTCCACCTCCTTCTGCACCAACTGCTCCACGACCTCCTTCTGCACCAGCTGCTCCACCACCTCCTGCTCCCTTTGGCAAAGGAGGTTCAAACCCAAGCAATGGTTTTCCAGGGTCTCTTTCGGATGGGTCCGGCTCAAAGGGACGGATTCTGTCACGTACTATTAGTTCAAAGAATAATGGCAAAAAGCTGAAGCCATTGCACTGGTTGAAACTATCTAGGGCGGTGCAAGGAAGTTTGTGGGCTGAGACACAGAAATCGGGTGAAGCTTCCAAAGCCCCAGAGATTGACATGTCAGAGCTTGAGAGTCTCTTCTCAGCAGCAGCCCCAAGTTCAGGTTCAACCAAGAAATCAAATTCCCAAAGCTCAGTTGGGCCTAAATCTGATAAAGTGCAGCTGATTGAGCATAGGCGAGCATACAATTGTGAAATCATGCTTTCAAAAGTGAAGGTGCCATTGCATGAATTAATGAGCTCAGTGCTAGCACTGGAAGAGTCAGCACTAGACATTGATCAGGTTGAGAATATCATAAAGTTTTGTCCTACGAAAGAAGAGATGGAATTACTTAAGGGTTATACAGGGGAAAAGGAGAAGTTAGGGAGGTGTGAACAGTTCTTCTTAGAGTTGATGCAAGTACCACGGGTAGAATCCAAGCTCAGAGTTTTTTCATTCAAAATTCAGTTCCAAACTCAGATCAGAGGTTCTGTCAAATTTAAGAGAGTTATGCAAACCATACTTTCCCTGGGCAATGCTTTGAACCAGGGAACTGCCAGGGGCTCTGCCATTGGATTCAGATTGGATAGTCTTCTGAAGCTTACTGAAACACGTGCACGGAACAAGAAGATGACTCTCATGCATTATCTTTGCAAGGTGCTGTCTGATAAACTACCAGAAGTTTTAGACTTCTCCAAGGATGTTGCTAACCTAGAGCCAGCAGCAAAGATCCAATTGAAGATTCTGGCAGAGGAGATGCAAGCTATAAGCAAAGGATTAGAGAAAGTTGTGCAGGAATTATCGATCTCTGAAAATGATGGTCCGATGTCAGAGACTTTCCGCAAGAATTTGAAAGGGTTCCTCTCTCATGCTGAAGCTGAAGTCCGTTCATTGGCTTCACTATATTCTCGCGTGGTAGGCTTTCGTGGATGTATCTTTGTCAATACTCTGCTCAACTTCACTGGAATGTTTAACAAAGCACATGAAGAGAACAGCAAGCAGCTAGAGCTTGAAATGAAGAAAACAGCAGACGGTGACAAAAAGAAGTGTGAACAAGAAAAGATAATACCAGCAGCAATCCGGACCGGCAACGTCCAATGA 3189 0.4594 MADILSEYDITIMDYPRHYEGCPVLKMELIHHFLRSGESWLSLGQHNVLLMHCERGGWPVLAFMLAALLIFRKLYTGEQRTLDMVYKQSPRELLHLLTPLNPIPSQLRYLQYVSRRNVAIDWPPLDRALMLDCIILRFIPNFDGEGGCHPLFRIYGQDPFSGDKNPKMLYSTPKRSKNIRCYKQGESELIKIDISCHIQGDVVVESTNLNADMEQEMMMFRVMFNTAFVRSNIMMLNRDEVDILWDGKDHFPKDFRAEILFSEMDAAAAVMVDRTSCFEEKEGLPVEAFAKVQEIFNYVDWLDPNADAALNVLQQMTASAIINDKLDTVSDQHGEMGTMPQGKMSKQSPENEKSKKGDMASKVDATPKASDISYLPGSMDASFSPETPPLRPARTRLGKAFHDSLPHTEVSHQLIDETEAQLQDRSPSSISRFAPESQSSPTSCSKSPTDTITLASNSGITSVQPPPALSPRTPLKEIPPVKTRLESFSPPPPPLPPTPPPKDHKPAIVRSPPPPPRPSNNDLHVIEGAPPPASPALKEEPQIKARHPPPPPPPPPPPAKDDSQVRARSPPPLPPPCLSVKAEAPSTPSAAPPPPPPPPPSASFPSNKPNPSVPAAPPPPSAPAAPPPPSAPTAPRPPSAPAAPPPPAPFGKGGSNPSNGFPGSLSDGSGSKGRILSRTISSKNNGKKLKPLHWLKLSRAVQGSLWAETQKSGEASKAPEIDMSELESLFSAAAPSSGSTKKSNSQSSVGPKSDKVQLIEHRRAYNCEIMLSKVKVPLHELMSSVLALEESALDIDQVENIIKFCPTKEEMELLKGYTGEKEKLGRCEQFFLELMQVPRVESKLRVFSFKIQFQTQIRGSVKFKRVMQTILSLGNALNQGTARGSAIGFRLDSLLKLTETRARNKKMTLMHYLCKVLSDKLPEVLDFSKDVANLEPAAKIQLKILAEEMQAISKGLEKVVQELSISENDGPMSETFRKNLKGFLSHAEAEVRSLASLYSRVVGFRGCIFVNTLLNFTGMFNKAHEENSKQLELEMKKTADGDKKKCEQEKIIPAAIRTGNVQ 1062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g03152 1062 PANTHER FORMIN-J 1 1047 - -
Aip01g03152 1062 MobiDBLite consensus disorder prediction 485 520 - -
Aip01g03152 1062 MobiDBLite consensus disorder prediction 732 753 - -
Aip01g03152 1062 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 128 264 IPR035892 -
Aip01g03152 1062 SUPERFAMILY Formin homology 2 domain (FH2 domain) 754 1039 - -
Aip01g03152 1062 Gene3D Protein tyrosine phosphatase superfamily 4 118 IPR029021 -
Aip01g03152 1062 ProSiteProfiles C2 tensin-type domain profile. 126 264 IPR014020 -
Aip01g03152 1062 SMART PTEN_C2_2 124 263 IPR014020 -
Aip01g03152 1062 MobiDBLite consensus disorder prediction 657 686 - -
Aip01g03152 1062 Pfam C2 domain of PTEN tumour-suppressor protein 127 263 IPR014020 -
Aip01g03152 1062 SMART it6_source 679 1062 IPR015425 -
Aip01g03152 1062 MobiDBLite consensus disorder prediction 348 362 - -
Aip01g03152 1062 Gene3D Formin, FH2 domain 678 1031 IPR042201 -
Aip01g03152 1062 MobiDBLite consensus disorder prediction 732 754 - -
Aip01g03152 1062 Pfam Formin Homology 2 Domain 684 858 IPR015425 -
Aip01g03152 1062 Pfam Formin Homology 2 Domain 856 1001 IPR015425 -
Aip01g03152 1062 MobiDBLite consensus disorder prediction 420 687 - -
Aip01g03152 1062 MobiDBLite consensus disorder prediction 568 652 - -
Aip01g03152 1062 MobiDBLite consensus disorder prediction 546 561 - -
Aip01g03152 1062 ProSiteProfiles Formin homology-2 (FH2) domain profile. 679 1046 IPR015425 -
Aip01g03152 1062 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 4 114 IPR029021 -
Aip01g03152 1062 MobiDBLite consensus disorder prediction 330 394 - -
Aip01g03152 1062 Gene3D - 123 267 - -
Aip01g03152 1062 MobiDBLite consensus disorder prediction 420 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g03152 Aip-Chr1 134674045 134680927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g03152 689 1051 FH2 protein (formin) Gene Family AT3G32400 62.374 1.51e-156 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g03152 - - ahf:112723424 1861.66