Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2500 ATGGATGGCGACGAAGCTCCTTGTCCATCTCCGTTCCCTCGCCAATCTTCATCCTCACTGCTGAACGACATCACCAACTTCAGAACCCCCAAACGCCCCTCCGTCAACCCTACCGTCCAAACTCCAAACACCAAATTCTTCACTGCCTCCAAATTAACCCCTCGCTCCTCCTCCTCCTCCGCCTCCGCTTTCCGTCGTCGCCCCTCCCTTGCTCCTCCCACGAAGAAATCAGTCACCGCCGCAGCCAGGAAGCTCAAGGCCTTCCAAGTTGAGCAGGCACAATCTTCCAGAAAGGCTCAGGTCAAGAAGGAGCAGTCCCTTAAATCCCTAGCCAAATCCATCACCGTATGGCTCAACTTCCTCCTCCAAAACCCAGCCTCCTGCGGCTGCGACTTGTCCATCTCCGGTGTCTCCGTAGGAAATGGAACTACCACCATGCCAGGCCCCAAGGGAAAGAGGGACAGTGGCCCTGGGATCTCGGTTGGGGTCGATTCATCTTGGCGAACTCCCAAGAGGCAGAGAAAGACATGGTCCAGGAACGAGTATCGTGCTGGCAATGAGAATGCCGCACTTGAGCTCCCAAATTTGGTGTTCTCTTCTTTGAGCGATTCTCTGAAAGATGTGTGCAGCTTTGAAGATTTGAAGCAGCGAATGAGGGTTTATCTGAGCCTTGGGAGTTGTAAGGAGATTTTTGAAGTCATGAGTCTAGTCACAAAGACAATTGATGGCGGAAGGCTGAACATGAAGGCACATTGCCCTATAGTAACGGATGTTGGGTTGAAAGATAAGGCCATAGGAATCCTTATGTGTTTTAATCCAATTTGGCTGCGAATTGGACTGTATATAATTTTCGGTGGTGATTCCTTGCTGTCAAGTGAAGATGCTGATTCTGATCAAGATGTCAAGTATCTGAAAATGCTCATTGACAAGCTATTCTTTTCACATGAGGGTCTAGCTAAAGCATTCTCTTATAACAAAATGGTTGAAGGCGTGTATAGGGCAGGGTACTATGAGAATTTGGGGAATGTCATTTTGAAGAGGATACTACTGCTTGTGCTTTTCTTGGATAAAGCTAAATGTAAAAGTTGCCTCCCGCTTGAGTATGGCATCGACGGATTAGATGGGGGTTCCCCTTTATTATTCAGAGCAGAGTCTTGGATTAGATCGAGTAGTCAACTGATTCATGAATTTCTATCATCTGATGTAATGCATGGAGAAGGAAACCTTTTAGCACACTTGTTGATTTTAGGTTACAAAGTATCTCATCAACAGGGTCATCTTGTTGGATATGATTTCAGTGTCAGAGATTTATTCGTTGATCTCCAAGATGGAGTGAAACTGTGTCGGGCTATTCAGCTCTTGCAACATAATCCCTCTATCCTGATGAAAATTGTAGTTCCCTCAGATACTCCTAAGAGAAATTTAGCAAACTGTGTTCTTGCCCTTCAATATCTTAAACAAGCTAGTGTGTCCCTACATGATGAAGATGGCATGATGATTTTAGCCGATGACATTGTTAGTGGTGATAAAGAACTTACACTTTCCTTGCTCTGGAATATGTTTGTTCACTTGCAGCTACCGCTTTTGGTTGACAAAACAAGTTTGGTGGGGGAAATTTCCAAAATTCGGGGAATCGGCATGGATCTCATAAACAGTGCAAATTCGACTTCTCTGGAGATGCTATTGAATTGGATTCAGGCCGTTTCTGAAAATTATGGTTGTGGAATTGACAGTTTTCATTCCCTTGTTGATGGCAAAGCTATCTGGTGCTTACTTGATTATTACTTCCAGAAGGAATTTCATAATTCCTGCTCATTGAAGGAAGTTAATATGAAAAGTAACAAGGCATCAGTAATGTCAGTTGATGAATACTCAGATGCATTGTACAATTTTATATTATCCCAGAAGTTGACTACAATACTTGGGAATTTTCCAGAGGTACTTCAGATAAGTGAGCTACTTCAATATAATGGTGCTTGCAGTGATCGAAGTGTGGTGATATTGTTGGTCTTCCTAGCAAGTCAATTATTTGTCAAGAAAAATGTGGATCAATTAAATTTCCATAAGCTCCTAGGCTATGATTGCCAAAGTGCAAACCGCAGACATTTGAGGATGGTGCAGTGCCTTTCAAGTTCTGAATCAGTACAAAATCCAGATGATTCATATGTACAAGGCAATGAAGATGCTTCAAGAAAATTCAAGGCCATCCAGGCTTGGTGGCAGGATATGGCTGAAAGAAACTGTATCAGGAAACCAGATTTTTCTAATTTGCAGAGATCCAGGACCATTGAATCCGGCACCGATACTAAAAGGGAATATGCTGCAAAAGTAATACAATCACGTTTCCGGGGATTTATCACTCGTCGTAAGTTTCAGACGATGATAAATGCTGTCACCTTTTTGCAAACGGTTTTCAGAGCATGGATGAGGGCAAGGCAGGAGTTGGTCTGTGTAGCATACACCACCAGTCAAGCCTGTGACTTTTCATGTGACGTATTGAGGCATTCTCAAACGTATAGGAGATATACCATGCTTTTTGTTCATAGGCATTCTTTAGTGAGGCTGAAGAGATCTGCAAAGCTAATACAGCAAGCTGTGAGGAGTTGGCTCTATTGCAGGCAGCAGCAACGATGCAGTAGATGTCCTTCTGTCAGGACACTAGATCCTGTGACTGCTGCCATTACTATTCAGAAATTTGTCCGTGGTTGGATGGCACGATATAGATATATTTTTGAGCTTGATCTAAAAGAGAAAGCTATGAATTTAGCCCAACAGAACATTACACTTGATCTTCATACAAATGCAGCTGTTACTATTCAGCTTGCTTGGAAGAATTACAGATGCTACAAGTCAACCTGCCAGAAGCAGCATCTTCTTGCAACTAAAATTCAAAGTAATTTCCGTAGGTGGTTGTTAAGAAAAAGATTTTTAAATCATGTTGAAGCTACCATAAAAGTTCAATCTTATTTCCGAATGTGGAGATGTGTGAAGGCTTTACAGCACTTAAAAGTCACATCAAGATCAGCTACTTTCATTCAGGCATTCTTGCGTGGATGGATTGCACGGAAAGAAGCTTTTGCACGCAAGAATCACATTGTTGACATTCAAAGGCATTGCCGTTGTTGGCTGGTGAAACGGGACTTCTTGCTCAAAAGAGATGCTGCAGTGAAGATCCAGTGTATTATACGAAGCGTGGCATGCCAAAAGGTTCTCAATTGTCAAAAAGATGCTGCGTTGGAGATCCAGCGTTTTATCAGGGGCGATTTAGCTCGAAATCGGCTATTAGGTGGTGCTTCTACATTACGTGCTCTCATTCCTATTAGTTGCATTTCAAGACCGGTTGGAGTTTGTAGTTTTCAACTTGAACTACTGTTGTCTTCAGTTGTGAAACTGCAGCGGTGGTGGAAGCGTCTCTTGTTCCATAAATTGGCAAATAAGTCTGCCATGATTATCCAGTCCTGTGCTCGTGAGTGGATGGCCAGGAGAAAAGCCAATATTTACAGACACCGAATTGTTGTTATCCAAGAAGATGCTGCAGTGGAGATCCAGAGATTTGTTAGGGGGCATATAACTAGAAATCGGCTGTTAGGGTGTGCTTCCAGTCTACGTGCAGCTATTCCTGTTGATTCCATTTCAAGTCCAGTTGGCTGTTGCAGTATTCAACTTAAACTGTTCTTGTTTTCTGTTGTGAAATTGCAACGATGGTGGAAAAGGTTCTTGTCACAAAAAAATATGACCAACTCTGCCATTACCATTCAATCTTGCATTCGTGGATGGATAGCCAGGCGAAAGGCCATTCTTCATAGACACCAAATTGTTGTCATCCAATCCCACTGGAAAGGTTACCTTGCACGTAGAGAGTCAAAGCAACTACTTGATTTGCGGTTGAGAATGAAAGAGTCTGCCAGAAATGTAGATGATAGCAAGCGTCTCATAAATAGACTATTGGCAGCGCTTTCAGAGCTACTTAACATGAAAAGTCTTAGTGATGTCCTGCATACTTGTTCTACATTAGATATGGCTACAGAACATTCTCAGAAATGCTGTGAAGAACTTGTGGCTGCAGGTGCAATTGACACCTTGTTGGGGCTTATCCGATCAGTCAGCAGGAGTATACCTGATCAGGAGGTTCTAAAACATGCTCTCTCAACTCTACGAAATCTTGGGCGCTACCCTCATCTACTGGAAGTGCTGATCCAAACACACAACTCTGTACAAATAATTGTCATGGAGTTACTAAGGAATAAGGAGGAGGGATACTTCATTGCCTCTGAACTTATGAAGAAGATTTGTTCAACTCATTCTGGGGTTCAAGCCGTGTTCAAGTCCCCAGCCCTCCTTAAACGACTGCACAACCTCGTTGATGAGCTTAAAAGAAAGGCAGTTTACGAGAAAAGAAATGGTAGAAGTGCTACCGCAATTATGAAAGATAACAGAGAGAGGAGATTGAAGGAAGCTGCTGAGATTCTGAAACTGATAGCACGAGCCTAA 4491 0.4295 MDGDEAPCPSPFPRQSSSSLLNDITNFRTPKRPSVNPTVQTPNTKFFTASKLTPRSSSSSASAFRRRPSLAPPTKKSVTAAARKLKAFQVEQAQSSRKAQVKKEQSLKSLAKSITVWLNFLLQNPASCGCDLSISGVSVGNGTTTMPGPKGKRDSGPGISVGVDSSWRTPKRQRKTWSRNEYRAGNENAALELPNLVFSSLSDSLKDVCSFEDLKQRMRVYLSLGSCKEIFEVMSLVTKTIDGGRLNMKAHCPIVTDVGLKDKAIGILMCFNPIWLRIGLYIIFGGDSLLSSEDADSDQDVKYLKMLIDKLFFSHEGLAKAFSYNKMVEGVYRAGYYENLGNVILKRILLLVLFLDKAKCKSCLPLEYGIDGLDGGSPLLFRAESWIRSSSQLIHEFLSSDVMHGEGNLLAHLLILGYKVSHQQGHLVGYDFSVRDLFVDLQDGVKLCRAIQLLQHNPSILMKIVVPSDTPKRNLANCVLALQYLKQASVSLHDEDGMMILADDIVSGDKELTLSLLWNMFVHLQLPLLVDKTSLVGEISKIRGIGMDLINSANSTSLEMLLNWIQAVSENYGCGIDSFHSLVDGKAIWCLLDYYFQKEFHNSCSLKEVNMKSNKASVMSVDEYSDALYNFILSQKLTTILGNFPEVLQISELLQYNGACSDRSVVILLVFLASQLFVKKNVDQLNFHKLLGYDCQSANRRHLRMVQCLSSSESVQNPDDSYVQGNEDASRKFKAIQAWWQDMAERNCIRKPDFSNLQRSRTIESGTDTKREYAAKVIQSRFRGFITRRKFQTMINAVTFLQTVFRAWMRARQELVCVAYTTSQACDFSCDVLRHSQTYRRYTMLFVHRHSLVRLKRSAKLIQQAVRSWLYCRQQQRCSRCPSVRTLDPVTAAITIQKFVRGWMARYRYIFELDLKEKAMNLAQQNITLDLHTNAAVTIQLAWKNYRCYKSTCQKQHLLATKIQSNFRRWLLRKRFLNHVEATIKVQSYFRMWRCVKALQHLKVTSRSATFIQAFLRGWIARKEAFARKNHIVDIQRHCRCWLVKRDFLLKRDAAVKIQCIIRSVACQKVLNCQKDAALEIQRFIRGDLARNRLLGGASTLRALIPISCISRPVGVCSFQLELLLSSVVKLQRWWKRLLFHKLANKSAMIIQSCAREWMARRKANIYRHRIVVIQEDAAVEIQRFVRGHITRNRLLGCASSLRAAIPVDSISSPVGCCSIQLKLFLFSVVKLQRWWKRFLSQKNMTNSAITIQSCIRGWIARRKAILHRHQIVVIQSHWKGYLARRESKQLLDLRLRMKESARNVDDSKRLINRLLAALSELLNMKSLSDVLHTCSTLDMATEHSQKCCEELVAAGAIDTLLGLIRSVSRSIPDQEVLKHALSTLRNLGRYPHLLEVLIQTHNSVQIIVMELLRNKEEGYFIASELMKKICSTHSGVQAVFKSPALLKRLHNLVDELKRKAVYEKRNGRSATAIMKDNRERRLKEAAEILKLIARA* 1497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2500 1496 PANTHER UNCHARACTERIZED 1176 1494 - -
Ahy1g2500 1496 PANTHER UNCHARACTERIZED 10 1175 - -
Ahy1g2500 1496 Gene3D - 890 951 - -
Ahy1g2500 1496 Gene3D - 1052 1100 - -
Ahy1g2500 1496 Gene3D - 1007 1051 - -
Ahy1g2500 1496 Gene3D - 769 819 - -
Ahy1g2500 1496 Gene3D - 953 1006 - -
Ahy1g2500 1496 Gene3D - 1142 1205 - -
Ahy1g2500 1496 Gene3D - 1244 1295 - -
Ahy1g2500 1496 ProSiteProfiles IQ motif profile. 771 799 IPR000048 GO:0005515
Ahy1g2500 1496 PANTHER ABNORMAL SPINDLE MICROTUBULE ASSEMBLY 1176 1494 - -
Ahy1g2500 1496 MobiDBLite consensus disorder prediction 1 77 - -
Ahy1g2500 1496 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1006 1082 IPR027417 -
Ahy1g2500 1496 ProSiteProfiles IQ motif profile. 1245 1272 IPR000048 GO:0005515
Ahy1g2500 1496 SMART arm_5 1345 1390 IPR000225 GO:0005515
Ahy1g2500 1496 ProSiteProfiles IQ motif profile. 1268 1297 IPR000048 GO:0005515
Ahy1g2500 1496 SUPERFAMILY Calponin-homology domain, CH-domain 347 608 IPR036872 -
Ahy1g2500 1496 ProSiteProfiles IQ motif profile. 1074 1103 IPR000048 GO:0005515
Ahy1g2500 1496 PANTHER ABNORMAL SPINDLE MICROTUBULE ASSEMBLY 10 1175 - -
Ahy1g2500 1496 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1356 1388 IPR000225 GO:0005515
Ahy1g2500 1496 Gene3D - 1298 1465 IPR011989 -
Ahy1g2500 1496 ProSiteProfiles IQ motif profile. 1005 1034 IPR000048 GO:0005515
Ahy1g2500 1496 SUPERFAMILY ARM repeat 1313 1457 IPR016024 -
Ahy1g2500 1496 ProSiteProfiles IQ motif profile. 1175 1204 IPR000048 GO:0005515
Ahy1g2500 1496 ProSiteProfiles Calponin homology (CH) domain profile. 413 525 IPR001715 GO:0005515
Ahy1g2500 1496 Pfam Calponin homology (CH) domain 433 523 IPR001715 GO:0005515
Ahy1g2500 1496 ProSiteProfiles IQ motif profile. 956 985 IPR000048 GO:0005515
Ahy1g2500 1496 Gene3D - 419 525 IPR036872 -
Ahy1g2500 1496 SMART iq_5 1244 1266 IPR000048 GO:0005515
Ahy1g2500 1496 SMART iq_5 1267 1289 IPR000048 GO:0005515
Ahy1g2500 1496 SMART iq_5 793 816 IPR000048 GO:0005515
Ahy1g2500 1496 SMART iq_5 1004 1026 IPR000048 GO:0005515
Ahy1g2500 1496 SMART iq_5 1174 1196 IPR000048 GO:0005515
Ahy1g2500 1496 SMART iq_5 854 876 IPR000048 GO:0005515
Ahy1g2500 1496 SMART iq_5 1143 1165 IPR000048 GO:0005515
Ahy1g2500 1496 SMART iq_5 978 1000 IPR000048 GO:0005515
Ahy1g2500 1496 SMART iq_5 1073 1095 IPR000048 GO:0005515
Ahy1g2500 1496 SMART iq_5 770 792 IPR000048 GO:0005515
Ahy1g2500 1496 SMART iq_5 1027 1049 IPR000048 GO:0005515
Ahy1g2500 1496 SMART iq_5 955 977 IPR000048 GO:0005515
Ahy1g2500 1496 SMART iq_5 888 910 IPR000048 GO:0005515
Ahy1g2500 1496 Pfam IQ calmodulin-binding motif 1247 1264 IPR000048 GO:0005515
Ahy1g2500 1496 Pfam IQ calmodulin-binding motif 981 998 IPR000048 GO:0005515
Ahy1g2500 1496 Pfam IQ calmodulin-binding motif 1272 1287 IPR000048 GO:0005515
Ahy1g2500 1496 Pfam IQ calmodulin-binding motif 1146 1163 IPR000048 GO:0005515
Ahy1g2500 1496 Pfam IQ calmodulin-binding motif 1177 1195 IPR000048 GO:0005515
Ahy1g2500 1496 Pfam IQ calmodulin-binding motif 1228 1244 IPR000048 GO:0005515
Ahy1g2500 1496 Pfam IQ calmodulin-binding motif 1007 1024 IPR000048 GO:0005515
Ahy1g2500 1496 Pfam IQ calmodulin-binding motif 774 792 IPR000048 GO:0005515
Ahy1g2500 1496 Pfam IQ calmodulin-binding motif 892 909 IPR000048 GO:0005515
Ahy1g2500 1496 Pfam IQ calmodulin-binding motif 960 976 IPR000048 GO:0005515
Ahy1g2500 1496 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1228 1292 IPR027417 -
Ahy1g2500 1496 MobiDBLite consensus disorder prediction 11 65 - -
Ahy1g2500 1496 ProSiteProfiles IQ motif profile. 891 918 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2500 Ahy-Chr1 103416216 103424577 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2500 K16743 - gmx:100817636 1587.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2396 11 138665846 138674349 Ahy1g2500 1 103416216 103424577 hybridization