Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1824 ATGTTTTCAGTTGCACCTTTGACTCCGGCAAGTTCACCGGTAATGGCTCCGCCGTCTCCGCCGCTGATTGACATTACTCCTCCCCCATCGCCATTGCTGCTCCAACCTACAGCAGCGCCACCACCATTTCCTTCTCCTCCATCACCGCCGTTAGTGCTTCCAATGCCTACAGCACCACCACTTACCTCGCCGCCGATCACTTCTCCGCCGGAGGTGGTGTCTCTGCCTACAAACTCCCCGCCTCCGGTTACTCAAGTCCCGCCGGCGATTTCCTCGTCGCCGCCTCCGCCGGAAATTCCAATCGTCGCTGCTTCACCGTCGACTCCGATTACATCGAACGAGAATCCAATTCCAGCAACGCAGTCTCCTCCGAATACGGCGTTGCCGGCGGCAGCATCTCCTCCGGTTCCGGCGACGCCGCTTCCTTCGTCTCCGCCATCTCTGATTCCGCCGTCGGTTACTTTTCCGTCAAATTCGTTACCACCATTGCCGCTGCTTCACCGGAAAGTTTCGCCGGCGCTTCCAGTTCCGACAGCCACTTCACCACCACCACAGAGATTTTGGCCTCTGGCGCCGGAAGCAGCAGCAACCTCTCCGCTGCTGCCACAGCCACCGGCGACCGTTTACCCTTTCACGGAACCTACATTGCCATCAACTCCAGAGGCAACGCCGGCGCAGCCACCGTCGAGTCGAAGCTTGCCGCTTGCGGTGGACGTTGATAAACACTCAGGGTTCGAAGTGCCAAGTGGATTCATAATTGAGGGAATTGTAATTGGTGGTATCGTTATTGGGTTTGTTGTAGCACTTATGTTACTTTTGTTCAGGAATAGAAAGAAAAAGCAGCAGCAGCAGCAGAAGAATCTGCATACACATCAATCTGAGGAATCATCACCTTGTGTTGGAGCTAAGAGTAAAAAATCAGGTTCTCATGTCATCAAAGTGCTGCCAAATCCATCAAAGCTAACAGAGGGAGGTGGAGATTTCGGCCCTGTGAATGGCATTTTCACATATGATGAGCTAGTAGCAGCCACTAAGAGTTTCTCTGAAGCCAACCTTCTTGGGGAAGGTGGATTTGGTTATGTATATAAAGGAATTCTTCCAAGTGGAAAGGAAATTGCAGTTAAACAGTTGAAATCAGGAAGCCAGCAAGGAGAGCGAGAATTTCAGGCCGAGGTTGAGACCATTAGCCGGGTGCATCACAAGCATCTTGTTGAGTTGGTTGGATACTGCGTTACCATGTCTGAAAGAATGCTTGTTTATGAATTTGTTCCAAATAACACATTGGAATTCCATTTACATGGGGAAGGGAAGCCCGTTGTACGGTGGGAGAAGAGAATTAAGATTGCCCTGGGATCTGCAAAAGGGCTCGCATATCTACATGAAGATTGTAATCCAGCAATCATTCACCGTGATATTAAAGCATCTAACATCCTTCTGGACTTCAATTTTGAAGCAAAGGTTTCTGACTTCGGCCTAGCAAAGATCTTCCCCAACAACGCTGATGGTTGCATCACTCACCTCACCACCCGAGTCGTGGGAACCTTTGGGTATCTGGCTCCAGAATATGCATCAAGTGGTAAACTAACAGATAAATCAGATGTATATTCCTATGGAGTGATGCTTTTAGAACTCTTAACTGGACGTCCAGCAATCAGTACAGAAGGATCAAGAAACGTGAGCTTGGTTGATTGGGCTAGGCCCTTGCTTGCGCAAGTGCTAGAAGATGGTGATATCAGTGATCTTGTTGATCCAAGGTTGCAGAATAATTATAAAGCTGATGAGATGACTAGAATGATTACCTGCGCAGCCGCCTGCGTGCGCCATTCAGCCAGCCTTCGACCCCGTATGAGCCAAATTGCAGGTGCCTTAGAAGGATTGGTTTCTCTGTCGGATCTTGTAGGCGACATTACGCCGGGGCATACCAGAATATACAGTTGGCCAGAGAGTTCAACTTATGATGCCTGCCAATACCAACAGGACTTGAGAGACTTCAATTTGGGATTATCATCTCAACAGTGCAGCTCAAGTGTGCATAGTGAAATGACTAGTGCTTATGGTCTTTGCCTATCTGACTCAAGTAGTGAAGGTTAA 2091 0.4926 MFSVAPLTPASSPVMAPPSPPLIDITPPPSPLLLQPTAAPPPFPSPPSPPLVLPMPTAPPLTSPPITSPPEVVSLPTNSPPPVTQVPPAISSSPPPPEIPIVAASPSTPITSNENPIPATQSPPNTALPAAASPPVPATPLPSSPPSLIPPSVTFPSNSLPPLPLLHRKVSPALPVPTATSPPPQRFWPLAPEAAATSPLLPQPPATVYPFTEPTLPSTPEATPAQPPSSRSLPLAVDVDKHSGFEVPSGFIIEGIVIGGIVIGFVVALMLLLFRNRKKKQQQQQKNLHTHQSEESSPCVGAKSKKSGSHVIKVLPNPSKLTEGGGDFGPVNGIFTYDELVAATKSFSEANLLGEGGFGYVYKGILPSGKEIAVKQLKSGSQQGEREFQAEVETISRVHHKHLVELVGYCVTMSERMLVYEFVPNNTLEFHLHGEGKPVVRWEKRIKIALGSAKGLAYLHEDCNPAIIHRDIKASNILLDFNFEAKVSDFGLAKIFPNNADGCITHLTTRVVGTFGYLAPEYASSGKLTDKSDVYSYGVMLLELLTGRPAISTEGSRNVSLVDWARPLLAQVLEDGDISDLVDPRLQNNYKADEMTRMITCAAACVRHSASLRPRMSQIAGALEGLVSLSDLVGDITPGHTRIYSWPESSTYDACQYQQDLRDFNLGLSSQQCSSSVHSEMTSAYGLCLSDSSSEG* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1824 696 CDD STKc_IRAK 353 626 - -
Ahy10g1824 696 MobiDBLite consensus disorder prediction 105 127 - -
Ahy10g1824 696 MobiDBLite consensus disorder prediction 128 147 - -
Ahy10g1824 696 SUPERFAMILY Protein kinase-like (PK-like) 333 623 IPR011009 -
Ahy10g1824 696 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Ahy10g1824 696 Gene3D Transferase(Phosphotransferase) domain 1 423 632 - -
Ahy10g1824 696 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 125 669 - -
Ahy10g1824 696 Pfam Protein kinase domain 348 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy10g1824 696 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK14 125 669 - -
Ahy10g1824 696 MobiDBLite consensus disorder prediction 283 305 - -
Ahy10g1824 696 ProSitePatterns Protein kinases ATP-binding region signature. 353 375 IPR017441 GO:0005524
Ahy10g1824 696 MobiDBLite consensus disorder prediction 11 103 - -
Ahy10g1824 696 Gene3D Phosphorylase Kinase; domain 1 328 422 - -
Ahy10g1824 696 MobiDBLite consensus disorder prediction 286 303 - -
Ahy10g1824 696 SMART serkin_6 347 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy10g1824 696 MobiDBLite consensus disorder prediction 213 233 - -
Ahy10g1824 696 MobiDBLite consensus disorder prediction 1 147 - -
Ahy10g1824 696 ProSiteProfiles Protein kinase domain profile. 347 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy10g1824 696 MobiDBLite consensus disorder prediction 213 230 - -
Ahy10g1824 696 PRINTS Proline rich extensin signature 47 59 - -
Ahy10g1824 696 PRINTS Proline rich extensin signature 81 97 - -
Ahy10g1824 696 PRINTS Proline rich extensin signature 60 81 - -
Ahy10g1824 696 PRINTS Proline rich extensin signature 13 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1824 Ahy-Chr10 101938241 101943351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1824 277 695 Trihelix Transcription Factor Family AT4G32710 53.793 1.15e-139 425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Ahy10g1824 Pkinase 4.10E-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1824 - - adu:107470979 1186.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2284 20 125265096 125270161 Ahy10g1824 10 101938241 101943351 hybridization